View source for FF:3987-173F6

{{f5samples
|DRA_sample_Accession=CAGE@SAMD00022547
|accession_numbers=CAGE;DRX024272;DRR026677;DRZ005929;DRZ006709;DRZ010544;DRZ011202
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000101,FF:0000103,FF:0000001,FF:0200001
|data_phase=2
|datafreeze_phase=2
|donor= biol_rep4
|ffid_belonging_in_development=CL:0000049,CL:0000134
|has_quality=
|id=FF:3987-173F6
|is_a=FF:0000103;;FF:0200001
|library_id=CNhs14362
|library_id_phase_based=2:CNhs14362
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;3987
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;3987
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.timecourse.hCAGE/macrophage%252c%2520TB%2520infection%252c%2520stimulated%2520BMDM%252bIL-4%252fIL-13%2528aaMph%2529%252c%2520with%2520Mtb%252c%2520028hr%2528004h%2520after%2520stimulation%2529%252c%2520biol_rep4.CNhs14362.3987-173F6.mm10.nobarcode.bam
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.timecourse.hCAGE/macrophage%252c%2520TB%2520infection%252c%2520stimulated%2520BMDM%252bIL-4%252fIL-13%2528aaMph%2529%252c%2520with%2520Mtb%252c%2520028hr%2528004h%2520after%2520stimulation%2529%252c%2520biol_rep4.CNhs14362.3987-173F6.mm10.nobarcode.ctss.bed.gz
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/macrophage%252c%2520TB%2520infection%252c%2520stimulated%2520BMDM%252bIL-4%252fIL-13%2528aaMph%2529%252c%2520with%2520Mtb%252c%2520028hr%2528004h%2520after%2520stimulation%2529%252c%2520biol_rep4.CNhs14362.3987-173F6.mm9.nobarcode.bam
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/macrophage%252c%2520TB%2520infection%252c%2520stimulated%2520BMDM%252bIL-4%252fIL-13%2528aaMph%2529%252c%2520with%2520Mtb%252c%2520028hr%2528004h%2520after%2520stimulation%2529%252c%2520biol_rep4.CNhs14362.3987-173F6.mm9.ctss.bed.gz
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/macrophage%252c%2520TB%2520infection%252c%2520stimulated%2520BMDM%252bIL-4%252fIL-13%2528aaMph%2529%252c%2520with%2520Mtb%252c%2520028hr%2528004h%2520after%2520stimulation%2529%252c%2520biol_rep4.CNhs14362.3987-173F6.mm9.nobarcode.rdna.fa.gz
|name=macrophage, TB infection, stimulated BMDM+IL-4/IL-13(aaMph), with Mtb
|part_of=
|profile_cagescan=
|profile_hcage=CNhs14362,LSID1238,Release_019,COMPLETED
|profile_rnaseq=
|profile_srnaseq=
|rna_box=173
|rna_catalog_number=
|rna_concentration=
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=F6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=173F6
|rna_weight_ug=
|sample_age=
|sample_category=time courses
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=macrophage
|sample_collaboration=Frank Brombacher (University of Cape Town, South Africa)
|sample_company=
|sample_dev_stage=UNDEFINED_DEV_STAGE
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_id=3987
|sample_note=
|sample_sex=male
|sample_species=Mouse (Mus musculus)
|sample_strain=Balb/c
|sample_tissue=bone marrow
|time= 028hr(004h after stimulation)
|timecourse=BMM_TB_activation_IL4-IL13
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:3987-173F6;search_select_hide=table117:3987-173F6
}}