Personal tools

FFCP PHASE1:Mm9::chr9:108419897..108419951,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:108419897..108419951,+
|short_description=p2@Qrich1
|description=CAGE_peak_2_at_Qrich1_5end
|association_with_transcript=-295bp_to_uc009rqf.1_5end
|EntrezGene=69232
|EntrezGene=69232
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=-295bp_to_uc009rqf.1_5end
|description=CAGE_peak_2_at_Qrich1_5end
|id=chr9:108419897..108419951,+
|ontology_enrichment_disease=
|phase1_expression=4.64431656603902,14.6569671208532,12.2849794635175,15.4256747766483,14.5259761684441,10.7442734023609,10.7461814673942,5.68142623142936,3.801295498095,4.91535505276186,5.65019295144166,4.54701306273417,9.41604014621631,6.99363219351979,6.66219523631325,6.47920855647443,4.19737126876888,5.8360500591274,3.29074640653773,3.39511721438424,7.82398269389842,3.3758923408301,2.87319768052829,6.39969691173627,5.50582274561208,9.76194338995534,7.32295393470427,6.67960821326256,11.2113817479261,8.06496415231778,6.87364583031445,3.17515336729816,6.1506478758457,0,2.59966457776147,5.65197794218874,1.63335485009895,6.27797446105362,2.3440060335714,3.14114246384279,4.1176204162171,1.36609096991689,5.82612423637384,5.28766635497425,6.2853697356099,5.13930906052708,6.25913075478431,1.30815093828268,3.73466510648602,5.44403717407994,5.03951117851305,1.43752564364972,3.35565212115473,10.8804321301702,7.39406358113421,8.2323019531503,10.8882707176728,8.76642556871652,4.85559506063035,3.70293685490423,3.80298842103708,4.40497891689872,6.22506357277798,8.99899717281399,12.8552627133707,8.5257613793532,6.5912024314049,5.37905627450176,6.53244557543409,6.07526722492608,3.15487442027073,7.9982275633065,3.97563373712904,6.00204916153275,4.12135525378416,8.27296907949019,4.40463523997555,9.44886301830389,10.4452442614246,5.93488294785872,5.6722339033494,5.2091337055676,9.21303896704557,4.50210088025344,6.1119299110724,5.59794312399969,4.8406371471695,4.47358669980721,7.57261933331841,7.02815508993105,4.92769630792852,13.7667820317022,7.47968467078526,10.7940638327563,12.9955283489534,12.9927797258227,6.88177658645584,6.13549161281008,3.11743205523443,3.18005617059306,5.21120653173718,3.84979432242953,17.8363667794652,35.5533351576666,3.46385665617943,3.54703811665138,4.54972000513305,7.53613606145796,8.80388804400384,12.1722554033156,4.51061849591953,6.39377504455497,8.76338889573022,6.0289056221049,10.4653949350777,10.8073268543521,20.2699873542187,14.4599356919912,1.76922110389975,3.88240439873782,5.74187947997023,4.363877278217,24.2309289583559,9.07620470735796,7.33063473847093,12.517395705221,0.599075622529601,0.599902730993408,1.39777249780371,9.43681028250383,9.15001205637253,8.04187853522332,9.03886464999838,8.95004100656157,10.5971902725376,13.1415423084884,3.97173519016234,6.71797641294502,9.60346482047964,13.0473950649614,2.73252930221678,2.75882525320168,3.78130472591233,2.56198190320716,3.12967896096108,3.58718416797579,4.49768277886698,10.8655415710387,1.5089759505299,4.53854592402766,2.63926686245923,4.60311038097907,4.17070873838397,6.61679116392116,7.40815691068596,4.77682240364384,1.40442637462647,2.57347907114715,1.70498099637356,4.34964122324554,3.75241695969754,3.96136535214233,4.26140524053378,3.14822770795846,3.5481435964097,3.72054311600653,3.48755421819505,5.48797109125697,4.11399624783701,5.08919138645195,5.6748166682099,5.84799949701329,6.14740322814942,4.42881181909227,11.1453672738987,8.43817821510132,12.5559137533843,10.0491215332147,2.34617075588757,3.0190767341857,5.02583099156164,8.67239155880373,12.2307924114679,13.5060194539917,9.96511029243474,17.6227881554692,19.604146286421,16.5133871794155,15.5971269695296,12.5834717211591,10.1584883441106,12.9441827615339,2.46568271239006,3.19895835307241,2.25415471346161,4.2766778847516,2.71533482034676,6.52263124979963,8.15751328902919,10.3327103585722,8.47793130343424,9.50158162197864,14.5261787272703,4.50481785433454,6.87956482896211,7.64531182108503,6.28866376304359,3.61765739628625,6.11102044275408,4.31544206176216,6.80967952455149,8.78596522201861,4.31304619582064,5.95425516269605,10.9213185590096,14.6495749209325,12.9166137735777,13.5084185981743,7.20537441649758,2.84237117655727,2.28150967018836,0.678980343100753,3.52035372432753,5.52770649557992,7.61739650835244,9.17128144931655,5.83250033192907,5.09368786192182,6.53764551495697,5.07976275618788,4.83517949224508,6.94315481191256,12.0633027151418,9.24639662491806,12.7858710984949,14.6246475541508,11.0779907091576,11.8383803458125,2.13115428989678,4.54447668967871,2.2085575359138,4.29482618726302,4.95473814785438,4.77937595905104,4.45597348164788,4.24614796183249,6.8817819284732,5.26060544240361,5.13874111330481,5.78378369559253,11.4971469018698,4.98583690268315,5.53815661802159,8.24850614862677,30.5313818181915,2.42780636154981,5.13950046840077,12.8251454234011,15.3556984298002,14.1420168054207,12.9214146584111,9.81541069589265,9.9819265947722,21.1744627816997,12.6502330289999,8.25084345985495,14.9793426531667,2.88097750450096,3.23396709456886,5.35842587578981,8.15765074754458,7.84822797449111,8.55654907131029,8.82948352432338,19.0084083531605,27.3263371414328,21.8323114074412,7.74965388824956,8.55761461488299,6.1519183426719,6.44610657616937,5.25250879184196,13.9910801582328,10.198391610578,7.17657699350981,3.30218988741156,3.51869602002452,5.83942216714542,6.15124024744613,6.17701067657611,1.01987057996313,2.09927178485487,0.690999869022119,16.2294005062569,3.79603192297362,3.65975040828328,6.26430976766447,4.80903080833278,6.55087691238533,7.55240339754996,9.75310777558964,10.4702376793612,12.1838074894285,18.0188400795208,8.45539408026285,4.9340460194513,5.12921320417003,4.66682852025714,3.48731523389874,4.56181538825101,3.99014611395563,5.9894017028217,5.24296722128554,8.69702834973622,6.62469014393091,5.68820017130721,2.63542779877213,2.67048488628551,2.7283372825337,4.29664069601955,4.17230845040656,3.12508168751919,2.06765338044408,4.34155734777035,3.81034033274999,5.24296162711571,4.77543615624787,4.13710919053417,3.27255326108393,7.02864189207155,6.43759264784788,2.06341870201794,10.744615447301,7.72758376128762,12.0116784288756,8.79127796482872,10.7184189539533,20.0628841614145,9.03602948187307,9.20650473014354,12.0308057822273,7.04598047609119,2.74033007908257,8.3093328712867,4.05013500139084,5.85417564191487,5.89085131679466,7.24864436452548,2.38710899443606,1.59609949360412,5.46347538413229,8.0225216632537,5.8691685535835,7.53758384645058,5.55616819504038,7.0051919461224,5.13470735346904,8.59170519996911,7.09742039692671,8.67681170375951,6.46126401542189,7.2988673741551,8.32814299856392,4.76293691283074,8.11190281613988,8.68091492086673,7.00546031365621,6.77115032618228,4.80016953339582,6.74408063405482,6.91464950847231,8.86613141457204,7.52875043322645,8.2922315733843,7.86590283352922,5.78753365163254,7.06181391998481,7.85599180320834,8.77899134118889,7.48634066054282,6.13846564754534,7.12709469455443,7.13754460630223,5.49583271463481,6.31615342802603,10.09893954027,10.7121465958552,6.83833399270498,8.11537424671475
|phase1_expression=4.64431656603902,14.6569671208532,12.2849794635175,15.4256747766483,14.5259761684441,10.7442734023609,10.7461814673942,5.68142623142936,3.801295498095,4.91535505276186,5.65019295144166,4.54701306273417,9.41604014621631,6.99363219351979,6.66219523631325,6.47920855647443,4.19737126876888,5.8360500591274,3.29074640653773,3.39511721438424,7.82398269389842,3.3758923408301,2.87319768052829,6.39969691173627,5.50582274561208,9.76194338995534,7.32295393470427,6.67960821326256,11.2113817479261,8.06496415231778,6.87364583031445,3.17515336729816,6.1506478758457,0,2.59966457776147,5.65197794218874,1.63335485009895,6.27797446105362,2.3440060335714,3.14114246384279,4.1176204162171,1.36609096991689,5.82612423637384,5.28766635497425,6.2853697356099,5.13930906052708,6.25913075478431,1.30815093828268,3.73466510648602,5.44403717407994,5.03951117851305,1.43752564364972,3.35565212115473,10.8804321301702,7.39406358113421,8.2323019531503,10.8882707176728,8.76642556871652,4.85559506063035,3.70293685490423,3.80298842103708,4.40497891689872,6.22506357277798,8.99899717281399,12.8552627133707,8.5257613793532,6.5912024314049,5.37905627450176,6.53244557543409,6.07526722492608,3.15487442027073,7.9982275633065,3.97563373712904,6.00204916153275,4.12135525378416,8.27296907949019,4.40463523997555,9.44886301830389,10.4452442614246,5.93488294785872,5.6722339033494,5.2091337055676,9.21303896704557,4.50210088025344,6.1119299110724,5.59794312399969,4.8406371471695,4.47358669980721,7.57261933331841,7.02815508993105,4.92769630792852,13.7667820317022,7.47968467078526,10.7940638327563,12.9955283489534,12.9927797258227,6.88177658645584,6.13549161281008,3.11743205523443,3.18005617059306,5.21120653173718,3.84979432242953,17.8363667794652,35.5533351576666,3.46385665617943,3.54703811665138,4.54972000513305,7.53613606145796,8.80388804400384,12.1722554033156,4.51061849591953,6.39377504455497,8.76338889573022,6.0289056221049,10.4653949350777,10.8073268543521,20.2699873542187,14.4599356919912,1.76922110389975,3.88240439873782,5.74187947997023,4.363877278217,24.2309289583559,9.07620470735796,7.33063473847093,12.517395705221,0.599075622529601,0.599902730993408,1.39777249780371,9.43681028250383,9.15001205637253,8.04187853522332,9.03886464999838,8.95004100656157,10.5971902725376,13.1415423084884,3.97173519016234,6.71797641294502,9.60346482047964,13.0473950649614,2.73252930221678,2.75882525320168,3.78130472591233,2.56198190320716,3.12967896096108,3.58718416797579,4.49768277886698,10.8655415710387,1.5089759505299,4.53854592402766,2.63926686245923,4.60311038097907,4.17070873838397,6.61679116392116,7.40815691068596,4.77682240364384,1.40442637462647,2.57347907114715,1.70498099637356,4.34964122324554,3.75241695969754,3.96136535214233,4.26140524053378,3.14822770795846,3.5481435964097,3.72054311600653,3.48755421819505,5.48797109125697,4.11399624783701,5.08919138645195,5.6748166682099,5.84799949701329,6.14740322814942,4.42881181909227,11.1453672738987,8.43817821510132,12.5559137533843,10.0491215332147,2.34617075588757,3.0190767341857,5.02583099156164,8.67239155880373,12.2307924114679,13.5060194539917,9.96511029243474,17.6227881554692,19.604146286421,16.5133871794155,15.5971269695296,12.5834717211591,10.1584883441106,12.9441827615339,2.46568271239006,3.19895835307241,2.25415471346161,4.2766778847516,2.71533482034676,6.52263124979963,8.15751328902919,10.3327103585722,8.47793130343424,9.50158162197864,14.5261787272703,4.50481785433454,6.87956482896211,7.64531182108503,6.28866376304359,3.61765739628625,6.11102044275408,4.31544206176216,6.80967952455149,8.78596522201861,4.31304619582064,5.95425516269605,10.9213185590096,14.6495749209325,12.9166137735777,13.5084185981743,7.20537441649758,2.84237117655727,2.28150967018836,0.678980343100753,3.52035372432753,5.52770649557992,7.61739650835244,9.17128144931655,5.83250033192907,5.09368786192182,6.53764551495697,5.07976275618788,4.83517949224508,6.94315481191256,12.0633027151418,9.24639662491806,12.7858710984949,14.6246475541508,11.0779907091576,11.8383803458125,2.13115428989678,4.54447668967871,2.2085575359138,4.29482618726302,4.95473814785438,4.77937595905104,4.45597348164788,4.24614796183249,6.8817819284732,5.26060544240361,5.13874111330481,5.78378369559253,11.4971469018698,4.98583690268315,5.53815661802159,8.24850614862677,30.5313818181915,2.42780636154981,5.13950046840077,12.8251454234011,15.3556984298002,14.1420168054207,12.9214146584111,9.81541069589265,9.9819265947722,21.1744627816997,12.6502330289999,8.25084345985495,14.9793426531667,2.88097750450096,3.23396709456886,5.35842587578981,8.15765074754458,7.84822797449111,8.55654907131029,8.82948352432338,19.0084083531605,27.3263371414328,21.8323114074412,7.74965388824956,8.55761461488299,6.1519183426719,6.44610657616937,5.25250879184196,13.9910801582328,10.198391610578,7.17657699350981,3.30218988741156,3.51869602002452,5.83942216714542,6.15124024744613,6.17701067657611,1.01987057996313,2.09927178485487,0.690999869022119,16.2294005062569,3.79603192297362,3.65975040828328,6.26430976766447,4.80903080833278,6.55087691238533,7.55240339754996,9.75310777558964,10.4702376793612,12.1838074894285,18.0188400795208,8.45539408026285,4.9340460194513,5.12921320417003,4.66682852025714,3.48731523389874,4.56181538825101,3.99014611395563,5.9894017028217,5.24296722128554,8.69702834973622,6.62469014393091,5.68820017130721,2.63542779877213,2.67048488628551,2.7283372825337,4.29664069601955,4.17230845040656,3.12508168751919,2.06765338044408,4.34155734777035,3.81034033274999,5.24296162711571,4.77543615624787,4.13710919053417,3.27255326108393,7.02864189207155,6.43759264784788,2.06341870201794,10.744615447301,7.72758376128762,12.0116784288756,8.79127796482872,10.7184189539533,20.0628841614145,9.03602948187307,9.20650473014354,12.0308057822273,7.04598047609119,2.74033007908257,8.3093328712867,4.05013500139084,5.85417564191487,5.89085131679466,7.24864436452548,2.38710899443606,1.59609949360412,5.46347538413229,8.0225216632537,5.8691685535835,7.53758384645058,5.55616819504038,7.0051919461224,5.13470735346904,8.59170519996911,7.09742039692671,8.67681170375951,6.46126401542189,7.2988673741551,8.32814299856392,4.76293691283074,8.11190281613988,8.68091492086673,7.00546031365621,6.77115032618228,4.80016953339582,6.74408063405482,6.91464950847231,8.86613141457204,7.52875043322645,8.2922315733843,7.86590283352922,5.78753365163254,7.06181391998481,7.85599180320834,8.77899134118889,7.48634066054282,6.13846564754534,7.12709469455443,7.13754460630223,5.49583271463481,6.31615342802603,10.09893954027,10.7121465958552,6.83833399270498,8.11537424671475
|short_description=p2@Qrich1
}}
}}

Revision as of 02:06, 19 April 2012

Short description:p2@Qrich1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Qrich1_5end
Coexpression cluster:NA
Association with transcript: -295bp_to_uc009rqf.1_5end
EntrezGene:Qrich1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Qrich1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D97.57
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D712.17
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C110.47
adrenal gland, neonate N25.CNhs11223.1377-27I310.81
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H114.46
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E35.49
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E917.62
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E310.16
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D58.16
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H19.50
liver, adult pregnant day01.CNhs10466.508-5B214.53
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H112.92
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B621.17
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I719.01
placenta, adult pregnant day17.CNhs10464.577-18G327.33
prostate, adult.CNhs10470.859-1F821.83
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G48.56
skin, neonate N03.CNhs11215.662-22H36.15
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D46.26
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A99.75
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I112.18
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F512.01
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D510.72
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F27.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:108419897..108419951,%2B&oldid=1000416"