Personal tools

FFCP PHASE1:Mm9::chr9:113617327..113617376,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:113617327..113617376,-
|short_description=p1@Pdcd6ip
|description=CAGE_peak_1_at_Pdcd6ip_5end
|association_with_transcript=0bp_to_ENSMUST00000035086,ENSMUST00000111853,ENSMUST00000111861,NM_001164677,NM_001164678,NM_011052,uc009rwn.2,uc009rwo.2,uc009rwp.2_5end
|EntrezGene=18571
|EntrezGene=18571
|HGNC=
|HGNC=
|UniProt=Q9WU78,E9QQ36,B8JJL8,Q80Y09
|UniProt=Q9WU78,E9QQ36,B8JJL8,Q80Y09
|association_with_transcript=0bp_to_ENSMUST00000035086,ENSMUST00000111853,ENSMUST00000111861,NM_001164677,NM_001164678,NM_011052,uc009rwn.2,uc009rwo.2,uc009rwp.2_5end
|description=CAGE_peak_1_at_Pdcd6ip_5end
|id=chr9:113617327..113617376,-
|ontology_enrichment_disease=
|phase1_expression=36.6740859869978,159.481761291188,196.10467217689,134.596574031539,152.773197633636,95.8590642616891,89.7072539886819,73.3420477148153,90.5271483435217,69.9852933702761,40.4074405012192,46.5071686942811,100.666029199549,95.5504998439642,37.9745128469855,37.6603997345076,38.4759032970481,64.0388195677223,66.2262714315718,64.9316167250986,52.8118831838143,78.5391423999003,65.2999472847338,106.234968734822,103.004767199159,173.992285126851,144.30526871329,121.741246467527,132.256299941636,136.852360459642,94.4571975391598,40.0069324279568,29.5231098040594,0,36.3953040886606,37.9014991417363,38.9963470461125,120.955641282966,104.698936166189,107.322367514629,107.646362309676,107.921186623434,113.60942260929,97.695930749048,99.1466387326852,92.1404695851641,68.8504383026274,39.4625533048608,70.7389508404999,49.7740541630166,71.813034293811,51.7509231713898,72.1465206048266,119.684753431872,151.914397212394,105.733628210774,95.1291020596672,86.1172394103329,22.659443616275,28.0365219014177,29.1562445612842,101.31451508867,88.0401848150028,112.037514801534,84.0536408181928,87.3890541383703,49.1344181250184,39.1902671427986,31.2105733048518,28.6212589263184,28.1835448210852,23.1377297367081,20.7616428494517,27.4379390241497,23.0029130443767,18.3843757322004,29.731287869835,30.9003358166154,31.7965523840424,23.7395317914349,19.5783557309157,19.7947080811569,35.177057874174,20.8222165711722,34.5324039975591,23.5702868378934,22.7794689278565,28.1463163196204,91.5529677398195,93.1041620515598,93.9160943393436,53.346280372846,80.2366173775146,66.3834925714515,70.8256295017959,66.756006177503,60.3911006566533,57.6054490313835,27.2775304833012,33.9205991529927,43.9431469703243,74.4293569003043,25.4805239706646,56.8853362522665,76.6378285179698,83.8621154722576,84.4225823174688,67.4826729139644,132.835134310999,103.018844510988,46.3205822465583,50.2368039215033,67.109109701513,59.5354430182859,76.6678370524795,91.2339453053444,192.070489929608,83.7230276566288,76.9611180196391,62.7655377795948,55.2103796150984,47.5177748072518,134.202068077048,40.9893115816166,36.2342802787277,145.865978524106,55.7140328952529,33.5945529356308,51.7175824187373,39.3949381634684,32.4825428001225,18.8481528169297,37.0245802009549,36.8230258555676,36.9862719316017,40.3980745038717,68.8434099628138,64.4428107760282,72.7841544288983,88.5960213282055,30.0578223243846,36.7843367093557,38.5332957783447,38.1283189124359,52.5922138439764,45.9928255822611,44.3209157167517,47.3427168452399,39.664510699643,37.2538977930604,46.8029990276104,49.3190397962043,47.5460796175772,77.6602331344431,75.5220440617152,41.9962302987021,34.4084461783485,32.1684883893394,48.5919583966463,55.0954554944435,45.0290035163705,41.0541500131114,63.2108444012511,46.2395944606399,48.7484076724115,51.3900017898401,54.4595004841227,62.9365195359044,57.5959474697182,61.3986315655816,68.7463504948857,61.5501947060649,73.3297385072109,66.1637644488633,37.2213208958505,31.2830021633025,257.726650727362,133.018635031763,37.7520203447364,42.9637842941811,71.3925735724397,112.539406739825,112.968046273194,133.728615157129,136.664369724819,136.206035556757,125.918939608935,138.2747480686,147.002921687817,170.775687644302,115.201580583212,134.818641993207,56.1416986821122,44.671168430404,77.7683376144255,50.9128319613286,57.7978411759525,70.7670422693314,84.2310674495107,81.62841183272,81.1683422939908,83.1696884832936,75.0025146530487,52.2225180891374,58.3780215486213,57.7895628829074,62.8866376304359,68.0119590501815,63.4018370935735,68.1839845758421,47.6677566718604,49.4210543738547,79.072513590045,76.2888942720432,67.0880997196305,75.5210845061864,76.4232981603346,81.532955110409,111.036667290129,40.3616707071133,44.8153685215571,40.2295853287196,49.7543326371624,79.5654722848625,100.454416453898,111.421312926803,88.9062212758917,71.9760241358519,97.1079541124096,85.8643769110467,96.0128499174379,93.7325899608195,90.4747703635634,109.868948131379,119.990482616645,107.339394312541,49.2890311262521,48.2912148759877,64.7543034237868,54.0287784217358,52.0588562036824,47.2430880598933,41.792139160163,64.5215754471891,61.2696353726584,67.3722143277421,61.5312266545839,67.511103177513,58.5025911360855,34.3813808571334,89.280313596001,56.2687307588527,66.2949924569055,85.7844639457184,71.6823747035799,40.3015856017269,42.0229744181004,47.5284800984863,64.0805107551277,63.9465107723369,77.5284879504663,53.8029919626708,55.9700884064012,59.0988737339976,61.1427929734993,63.9440368138758,66.7261627277424,32.9511802077298,34.5387685699955,45.0107773566344,47.8818630834139,51.7269571046005,50.5165493248511,40.4938382322417,123.906661857639,112.059165486961,103.868875483887,84.7515340119207,91.5503299365784,87.9362445452512,90.4842367543774,115.555193420523,133.206742339842,57.2964183212475,64.5891929415883,53.4541988024746,55.0027746288044,50.8594833912666,57.8216583259936,71.6075682136416,69.6911562974807,65.2173767828246,68.1325870855809,115.515144779829,46.817727050008,64.8589100134647,63.6151457440409,74.4354333811509,70.094382962523,89.9545190386754,98.7708795917764,98.4202341859951,148.409144419103,103.14232597243,63.1336091326293,43.3597983527538,34.4153660150763,49.7795042160762,40.1687051015744,44.7733732550562,48.5858967993421,55.2066591738348,52.0102348351526,43.4851417486811,47.8129810388057,107.759792134209,50.4785786072509,56.0801826119957,60.5431035076525,88.7972410510708,87.8171588133191,85.6993555077378,78.1277598753513,78.3499651597626,86.9519663933548,87.0129977730934,99.7968698775065,92.1709442914356,111.851195387761,105.883089148304,75.6972101005561,52.4826061165433,79.5773081565732,86.9353173144857,145.078553523764,120.51376876786,134.837710440732,76.7405319174106,19.2015626489803,25.7782132444019,22.3429250241365,28.3557750867085,28.773465830367,25.6833925112498,32.4010800111267,30.621841819247,26.2822597210839,24.3347346523355,30.8248422325005,48.2820096815248,35.1711227853516,56.1576516427759,47.582187916552,47.2477816716536,52.2279810333796,49.2423786800957,51.6679927442823,51.2975339880509,51.4562978777187,48.8542224189937,41.7641123315676,44.1133300069549,47.9011811089815,48.5819565108735,49.5984915043981,46.1053036908255,53.9832530052332,49.9004339255607,34.2869252385415,42.7716692844003,44.3491313302017,47.9643174886684,47.7134558705726,48.399555714039,49.2076247027758,41.828084118617,42.5066876337547,53.8696580791429,52.3180429927608,47.7746739521483,45.0154147486658,42.1428208025827,55.942917184531,64.9507502638659,69.7116193167317,69.1884794035521,64.2728795751314,65.7362428976156,54.2570735351786
|phase1_expression=36.6740859869978,159.481761291188,196.10467217689,134.596574031539,152.773197633636,95.8590642616891,89.7072539886819,73.3420477148153,90.5271483435217,69.9852933702761,40.4074405012192,46.5071686942811,100.666029199549,95.5504998439642,37.9745128469855,37.6603997345076,38.4759032970481,64.0388195677223,66.2262714315718,64.9316167250986,52.8118831838143,78.5391423999003,65.2999472847338,106.234968734822,103.004767199159,173.992285126851,144.30526871329,121.741246467527,132.256299941636,136.852360459642,94.4571975391598,40.0069324279568,29.5231098040594,0,36.3953040886606,37.9014991417363,38.9963470461125,120.955641282966,104.698936166189,107.322367514629,107.646362309676,107.921186623434,113.60942260929,97.695930749048,99.1466387326852,92.1404695851641,68.8504383026274,39.4625533048608,70.7389508404999,49.7740541630166,71.813034293811,51.7509231713898,72.1465206048266,119.684753431872,151.914397212394,105.733628210774,95.1291020596672,86.1172394103329,22.659443616275,28.0365219014177,29.1562445612842,101.31451508867,88.0401848150028,112.037514801534,84.0536408181928,87.3890541383703,49.1344181250184,39.1902671427986,31.2105733048518,28.6212589263184,28.1835448210852,23.1377297367081,20.7616428494517,27.4379390241497,23.0029130443767,18.3843757322004,29.731287869835,30.9003358166154,31.7965523840424,23.7395317914349,19.5783557309157,19.7947080811569,35.177057874174,20.8222165711722,34.5324039975591,23.5702868378934,22.7794689278565,28.1463163196204,91.5529677398195,93.1041620515598,93.9160943393436,53.346280372846,80.2366173775146,66.3834925714515,70.8256295017959,66.756006177503,60.3911006566533,57.6054490313835,27.2775304833012,33.9205991529927,43.9431469703243,74.4293569003043,25.4805239706646,56.8853362522665,76.6378285179698,83.8621154722576,84.4225823174688,67.4826729139644,132.835134310999,103.018844510988,46.3205822465583,50.2368039215033,67.109109701513,59.5354430182859,76.6678370524795,91.2339453053444,192.070489929608,83.7230276566288,76.9611180196391,62.7655377795948,55.2103796150984,47.5177748072518,134.202068077048,40.9893115816166,36.2342802787277,145.865978524106,55.7140328952529,33.5945529356308,51.7175824187373,39.3949381634684,32.4825428001225,18.8481528169297,37.0245802009549,36.8230258555676,36.9862719316017,40.3980745038717,68.8434099628138,64.4428107760282,72.7841544288983,88.5960213282055,30.0578223243846,36.7843367093557,38.5332957783447,38.1283189124359,52.5922138439764,45.9928255822611,44.3209157167517,47.3427168452399,39.664510699643,37.2538977930604,46.8029990276104,49.3190397962043,47.5460796175772,77.6602331344431,75.5220440617152,41.9962302987021,34.4084461783485,32.1684883893394,48.5919583966463,55.0954554944435,45.0290035163705,41.0541500131114,63.2108444012511,46.2395944606399,48.7484076724115,51.3900017898401,54.4595004841227,62.9365195359044,57.5959474697182,61.3986315655816,68.7463504948857,61.5501947060649,73.3297385072109,66.1637644488633,37.2213208958505,31.2830021633025,257.726650727362,133.018635031763,37.7520203447364,42.9637842941811,71.3925735724397,112.539406739825,112.968046273194,133.728615157129,136.664369724819,136.206035556757,125.918939608935,138.2747480686,147.002921687817,170.775687644302,115.201580583212,134.818641993207,56.1416986821122,44.671168430404,77.7683376144255,50.9128319613286,57.7978411759525,70.7670422693314,84.2310674495107,81.62841183272,81.1683422939908,83.1696884832936,75.0025146530487,52.2225180891374,58.3780215486213,57.7895628829074,62.8866376304359,68.0119590501815,63.4018370935735,68.1839845758421,47.6677566718604,49.4210543738547,79.072513590045,76.2888942720432,67.0880997196305,75.5210845061864,76.4232981603346,81.532955110409,111.036667290129,40.3616707071133,44.8153685215571,40.2295853287196,49.7543326371624,79.5654722848625,100.454416453898,111.421312926803,88.9062212758917,71.9760241358519,97.1079541124096,85.8643769110467,96.0128499174379,93.7325899608195,90.4747703635634,109.868948131379,119.990482616645,107.339394312541,49.2890311262521,48.2912148759877,64.7543034237868,54.0287784217358,52.0588562036824,47.2430880598933,41.792139160163,64.5215754471891,61.2696353726584,67.3722143277421,61.5312266545839,67.511103177513,58.5025911360855,34.3813808571334,89.280313596001,56.2687307588527,66.2949924569055,85.7844639457184,71.6823747035799,40.3015856017269,42.0229744181004,47.5284800984863,64.0805107551277,63.9465107723369,77.5284879504663,53.8029919626708,55.9700884064012,59.0988737339976,61.1427929734993,63.9440368138758,66.7261627277424,32.9511802077298,34.5387685699955,45.0107773566344,47.8818630834139,51.7269571046005,50.5165493248511,40.4938382322417,123.906661857639,112.059165486961,103.868875483887,84.7515340119207,91.5503299365784,87.9362445452512,90.4842367543774,115.555193420523,133.206742339842,57.2964183212475,64.5891929415883,53.4541988024746,55.0027746288044,50.8594833912666,57.8216583259936,71.6075682136416,69.6911562974807,65.2173767828246,68.1325870855809,115.515144779829,46.817727050008,64.8589100134647,63.6151457440409,74.4354333811509,70.094382962523,89.9545190386754,98.7708795917764,98.4202341859951,148.409144419103,103.14232597243,63.1336091326293,43.3597983527538,34.4153660150763,49.7795042160762,40.1687051015744,44.7733732550562,48.5858967993421,55.2066591738348,52.0102348351526,43.4851417486811,47.8129810388057,107.759792134209,50.4785786072509,56.0801826119957,60.5431035076525,88.7972410510708,87.8171588133191,85.6993555077378,78.1277598753513,78.3499651597626,86.9519663933548,87.0129977730934,99.7968698775065,92.1709442914356,111.851195387761,105.883089148304,75.6972101005561,52.4826061165433,79.5773081565732,86.9353173144857,145.078553523764,120.51376876786,134.837710440732,76.7405319174106,19.2015626489803,25.7782132444019,22.3429250241365,28.3557750867085,28.773465830367,25.6833925112498,32.4010800111267,30.621841819247,26.2822597210839,24.3347346523355,30.8248422325005,48.2820096815248,35.1711227853516,56.1576516427759,47.582187916552,47.2477816716536,52.2279810333796,49.2423786800957,51.6679927442823,51.2975339880509,51.4562978777187,48.8542224189937,41.7641123315676,44.1133300069549,47.9011811089815,48.5819565108735,49.5984915043981,46.1053036908255,53.9832530052332,49.9004339255607,34.2869252385415,42.7716692844003,44.3491313302017,47.9643174886684,47.7134558705726,48.399555714039,49.2076247027758,41.828084118617,42.5066876337547,53.8696580791429,52.3180429927608,47.7746739521483,45.0154147486658,42.1428208025827,55.942917184531,64.9507502638659,69.7116193167317,69.1884794035521,64.2728795751314,65.7362428976156,54.2570735351786
|short_description=p1@Pdcd6ip
}}
}}

Revision as of 02:17, 19 April 2012

Short description:p1@Pdcd6ip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdcd6ip_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000035086, ENSMUST00000111853, ENSMUST00000111861, NM_001164677, NM_001164678, NM_011052, uc009rwn.2, uc009rwo.2, uc009rwp.2_5end
EntrezGene:Pdcd6ip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdcd6ip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5159.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6196.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I3134.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I4152.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I795.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I889.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E973.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E790.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F269.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E640.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F146.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4100.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E895.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A137.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A538.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A264.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A664.93
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A352.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H278.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I965.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1106.23
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2103.00
GP2+ M cell, pool1.CNhs13228.11845-124H9173.99
GP2+ M cell, pool2.CNhs13231.11846-124I1144.31
GP2+ M cell, pool3.CNhs13240.11847-124I2121.74
Ileum epithelium, pool1.CNhs13199.10252-104B9132.26
Ileum epithelium, pool2.CNhs13232.10253-104C1136.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C894.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I340.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G629.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8120.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1104.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3107.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9107.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2107.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4113.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D897.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D999.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B392.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B768.85
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.46
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B870.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.77
Mouse Astrocytes, donor2.CNhs12078.11552-120C471.81
Mouse Astrocytes, donor3.CNhs12107.11633-122C451.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A272.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9119.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1151.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1105.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E195.13
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C586.12
Mouse Granule cells, donor1.CNhs12131.11713-123C322.66
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6101.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D188.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7112.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E784.05
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D287.39
Mouse Microglia, donor1.CNhs12629.11718-123C849.13
Mouse Microglia, donor2.CNhs12634.11736-123E839.19
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.18
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.15
Mouse Schwann, donor1.CNhs12507.11728-123D991.55
Mouse Schwann, donor2.CNhs12573.11746-123F993.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.92
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F753.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C866.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F470.83
Mouse hepatocyte, donor8.CNhs13091.11824-124F666.76
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A760.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I757.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.92
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H174.43
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G176.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G283.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G384.42
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B667.48
accessory axillary lymph node, adult.CNhs10475.1063-29H9132.84
adrenal gland, adult.CNhs10508.49-24D7103.02
adrenal gland, embryo E14.CNhs11038.406-44C546.32
adrenal gland, embryo E16.CNhs11004.1254-43D650.24
adrenal gland, embryo E17.CNhs11043.1263-45I167.11
adrenal gland, embryo E18.CNhs11026.1262-18F559.54
adrenal gland, neonate N00.CNhs11191.1311-23C176.67
adrenal gland, neonate N25.CNhs11223.1377-27I391.23
amnion, adult pregnant day17.5.CNhs10488.583-22A8192.07
aorta, adult.CNhs10498.46-23H183.72
bone (os femoris), adult.CNhs10483.56-12G276.96
bone (os femoris), neonate N02.CNhs11227.1985-43F562.77
bone (os femoris), neonate N16.CNhs11225.1525-43A655.21
bone (os femoris), neonate N20.CNhs11195.1350-25C347.52
cecum, adult.CNhs10467.37-13H4134.20
cerebellum, adult.CNhs10494.15-8B240.99
cerebellum, neonate N30.CNhs11135.1395-42I236.23
colon, adult.CNhs10468.36-18H7145.87
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C755.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D451.72
corpora quadrigemina, adult.CNhs10501.16-22A439.39
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F118.85
cortex, adult.CNhs10473.12-14D537.02
cortex, neonate N30.CNhs11107.1392-42F236.82
diencephalon, adult.CNhs10482.20-12F236.99
diencephalon, neonate N30.CNhs11201.1388-42B240.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B168.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A264.44
epididymis, adult.CNhs10490.58-23B272.78
eyeball, adult.CNhs10484.31-12G488.60
eyeball, embryo E12.CNhs11016.345-16C630.06
eyeball, embryo E14.CNhs10521.399-16E236.78
eyeball, embryo E15.CNhs10593.426-16C938.53
eyeball, embryo E17.CNhs11023.1261-18D438.13
eyeball, neonate N00.CNhs11207.633-15C652.59
eyeball, neonate N01.CNhs11140.1532-43E745.99
eyeball, neonate N02.CNhs11205.1551-44G844.32
eyeball, neonate N16.CNhs11188.777-19A247.34
forelimb, embryo E11.CNhs10596.335-25E239.66
forelimb, embryo E12.CNhs10600.359-14H237.25
forelimb, embryo E13.CNhs10589.384-1E246.80
forelimb, embryo E14.CNhs10577.413-26A849.32
forelimb, embryo E15.CNhs11007.437-20E747.55
forelimb, embryo E17.CNhs10598.1517-43C477.66
forelimb, embryo E18.CNhs11008.1520-43B575.52
gonad, embryo E13.CNhs11044.1564-45I642.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.17
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D548.59
heart, embryo E11.CNhs10586.331-24E955.10
heart, embryo E12.CNhs11015.353-12F545.03
heart, embryo E13.CNhs11013.376-3I941.05
heart, embryo E14.CNhs10597.403-26D463.21
heart, embryo E15.CNhs11017.431-16C846.24
heart, embryo E16.CNhs11021.457-17C648.75
heart, embryo E17.CNhs11025.479-18E551.39
heart, embryo E18.CNhs11030.1283-20G354.46
heart, neonate N00.CNhs11213.639-21E362.94
heart, neonate N03.CNhs11221.1349-25I257.60
heart, neonate N10.CNhs11118.749-24G161.40
heart, neonate N16.CNhs11209.782-15G168.75
heart, neonate N20.CNhs11127.821-26I661.55
heart, neonate N25.CNhs11196.1351-25D373.33
heart, neonate N30.CNhs11202.1390-42D266.16
hippocampus, adult.CNhs10478.13-16E837.22
hippocampus, neonate N00.CNhs11228.627-43G131.28
intestinal mucosa, adult.CNhs10506.860-29I3257.73
intestine, adult.CNhs10496.178-9A3133.02
intestine, embryo E12.CNhs11019.1251-16I537.75
intestine, embryo E13.CNhs11010.381-16D542.96
intestine, embryo E15.CNhs10602.976-16D871.39
intestine, embryo E16.CNhs10585.463-22H4112.54
intestine, embryo E17.CNhs10582.482-18D3112.97
intestine, embryo E18.CNhs10526.1289-20F7133.73
intestine, neonate N00.CNhs11126.644-26D1136.66
intestine, neonate N01.CNhs11192.1322-23E9136.21
intestine, neonate N06.CNhs11102.688-20B8125.92
intestine, neonate N07.CNhs11095.720-20F2138.27
intestine, neonate N10.CNhs11098.755-23A5147.00
intestine, neonate N20.CNhs11187.827-18D1170.78
intestine, neonate N25.CNhs11121.1352-25E3115.20
intestine, neonate N30.CNhs11131.1384-42G1134.82
kidney, embryo E14.CNhs10606.411-4I956.14
kidney, embryo E15.CNhs10997.434-16F844.67
kidney, embryo E16.CNhs10584.464-22A577.77
kidney, embryo E17.CNhs11028.483-18I250.91
kidney, embryo E18.CNhs11001.1288-20C757.80
kidney, neonate N00.CNhs11214.646-21G770.77
kidney, neonate N10.CNhs11206.758-6D584.23
kidney, neonate N20.CNhs11113.832-19I181.63
kidney, neonate N25.CNhs11122.1353-25F381.17
kidney, neonate N30.CNhs11203.1385-42H183.17
liver, adult pregnant day01.CNhs10466.508-5B275.00
liver, embryo E12.CNhs10601.355-15F852.22
liver, embryo E13.CNhs10524.378-3H658.38
liver, embryo E14.CNhs10594.409-16E157.79
liver, embryo E15.CNhs10520.433-16D762.89
liver, embryo E16.CNhs10523.462-17F568.01
liver, embryo E17.CNhs10510.481-18A363.40
liver, embryo E18.CNhs10579.499-43G468.18
liver, neonate N00.CNhs11117.641-24F447.67
liver, neonate N03.CNhs11123.1345-25G249.42
liver, neonate N06.CNhs11101.684-20A879.07
liver, neonate N07.CNhs11103.716-20H276.29
liver, neonate N10.CNhs11115.751-24B967.09
liver, neonate N20.CNhs11220.823-25A375.52
liver, neonate N25.CNhs11198.1368-26H176.42
liver, neonate N30.CNhs11106.1382-42D181.53
lung, adult.CNhs10474.28-22B1111.04
lung, embryo E12.CNhs10522.354-16G240.36
lung, embryo E14.CNhs10604.404-26F844.82
lung, embryo E15.CNhs11020.432-17C540.23
lung, embryo E16.CNhs10998.458-17B649.75
lung, embryo E17.CNhs10605.480-44A679.57
lung, embryo E18.CNhs10583.1287-20I6100.45
lung, neonate N00.CNhs11224.640-42C6111.42
lung, neonate N06.CNhs11212.683-20E588.91
lung, neonate N07.CNhs11111.715-19A371.98
lung, neonate N10.CNhs11219.750-23E697.11
lung, neonate N20.CNhs11109.822-18A485.86
lung, neonate N25.CNhs11119.1359-25C796.01
lung, neonate N30.CNhs11133.1394-42H293.73
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A190.47
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1109.87
mammary gland, adult lactating day02.CNhs10480.595-22B6119.99
mammary gland, adult pregnant day19.CNhs10476.588-5H2107.34
medulla oblongata, adult.CNhs10477.17-12C249.29
medulla oblongata, neonate N30.CNhs11200.1396-42A348.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C764.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C254.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E152.06
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E247.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E341.79
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D764.52
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D861.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D967.37
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D461.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D567.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D658.50
olfactory brain, adult.CNhs10489.18-22I934.38
ovary, adult.CNhs10507.91-2I789.28
ovary, embryo E18.CNhs11040.505-44H756.27
ovary, neonate N00.CNhs11217.1299-22I466.29
oviduct, adult pregnant day01.CNhs10500.988-6G685.78
pancreas, adult.CNhs10486.34-16E471.68
pancreas, embryo E14.CNhs11012.405-44F440.30
pancreas, embryo E15.CNhs11042.1556-45F242.02
pancreas, embryo E16.CNhs11003.460-26E547.53
pancreas, embryo E17.CNhs10599.1558-45G364.08
pancreas, embryo E18.CNhs10580.1535-43I763.95
pancreas, neonate N00.CNhs11105.645-26G977.53
pancreas, neonate N01.CNhs11138.1531-43D753.80
pancreas, neonate N02.CNhs11139.1539-43D855.97
pancreas, neonate N16.CNhs11136.787-43B659.10
pancreas, neonate N25.CNhs11094.1555-45E261.14
pancreas, neonate N30.CNhs11182.1548-44H563.94
pituitary gland, adult.CNhs10493.21-1G866.73
pituitary gland, embryo E12.CNhs11018.346-16E632.95
pituitary gland, embryo E13.CNhs11009.370-44C734.54
pituitary gland, embryo E14.CNhs11037.398-44A545.01
pituitary gland, embryo E15.CNhs10592.427-16B947.88
pituitary gland, embryo E16.CNhs11036.449-43F651.73
pituitary gland, embryo E17.CNhs11039.1265-44F550.52
pituitary gland, neonate N00.CNhs11190.1308-22E940.49
placenta, adult pregnant day10.CNhs10472.539-13I7123.91
placenta, adult pregnant day17.CNhs10464.577-18G3112.06
prostate, adult.CNhs10470.859-1F8103.87
skin, adult.CNhs10492.30-1C384.75
skin, neonate N00.CNhs11124.650-25G491.55
skin, neonate N03.CNhs11215.662-22H387.94
skin, neonate N06.CNhs11097.693-20I590.48
skin, neonate N10.CNhs11108.762-6C4115.56
small intestine, neonate N16.CNhs11114.790-21I1133.21
spinal cord, adult.CNhs10505.24-13C957.30
spleen, adult.CNhs10465.25-2G264.59
spleen, embryo E16.CNhs11035.461-43C153.45
spleen, embryo E18.CNhs11011.1271-21F255.00
spleen, neonate N10.CNhs11116.752-24D150.86
spleen, neonate N20.CNhs11112.824-19H157.82
spleen, neonate N25.CNhs11099.1354-25G371.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C669.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C965.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D368.13
stomach, adult.CNhs10503.33-1H6115.52
stomach, embryo E12.CNhs10588.356-43E346.82
stomach, embryo E15.CNhs10603.1252-16G864.86
stomach, embryo E16.CNhs11022.459-17D463.62
stomach, embryo E17.CNhs11006.1035-18D574.44
stomach, embryo E18.CNhs10999.1286-20C670.09
stomach, neonate N03.CNhs11193.1340-24B889.95
stomach, neonate N07.CNhs11210.718-18A998.77
stomach, neonate N25.CNhs11104.1355-25E498.42
stomach, neonate N30.CNhs11134.1386-42I1148.41
submandibular gland, adult.CNhs10469.59-29C1103.14
testis, adult.CNhs10504.57-7G563.13
testis, embryo E13.CNhs11031.389-23F543.36
testis, embryo E15.CNhs11034.443-27C534.42
testis, embryo E16.CNhs11033.470-26G549.78
testis, embryo E17.CNhs11029.486-18I540.17
testis, embryo E18.CNhs11027.503-18G544.77
testis, neonate N00.CNhs11189.1300-22B748.59
testis, neonate N07.CNhs11222.726-26I455.21
testis, neonate N10.CNhs11204.763-44D952.01
testis, neonate N20.CNhs11110.839-18H343.49
testis, neonate N30.CNhs11130.1391-42E247.81
thymus, adult.CNhs10471.38-12B5107.76
thymus, embryo E14.CNhs11041.402-44I450.48
thymus, embryo E15.CNhs11005.430-45I256.08
thymus, embryo E16.CNhs11002.456-26C560.54
thymus, embryo E17.CNhs10581.478-18C188.80
thymus, embryo E18.CNhs10595.1273-19G487.82
thymus, neonate N02.CNhs11181.1541-43F885.70
thymus, neonate N03.CNhs11137.2104-43C778.13
thymus, neonate N06.CNhs11197.681-26C478.35
thymus, neonate N07.CNhs11211.713-19D386.95
thymus, neonate N10.CNhs11194.748-24E487.01
thymus, neonate N20.CNhs11186.820-7A299.80
thymus, neonate N25.CNhs11125.1362-25G792.17
thymus, neonate N30.CNhs11132.1393-42G2111.85
tongue, adult.CNhs10499.32-1B4105.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H375.70
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F752.48
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G579.58
urinary bladder, adult.CNhs10481.879-12E486.94
uterus, adult pregnant day19.CNhs10497.590-15F5145.08
uterus, adult.CNhs10509.92-27E5120.51
vagina, adult.CNhs10502.89-27D5134.84
vesicular gland, adult.CNhs10491.51-27F876.74
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I830.82
whole body, embryo E12.CNhs10587.857-27C948.28
whole body, embryo E13.CNhs10512.372-23H235.17
whole body, embryo E14.5.CNhs10578.420-27D256.16
whole body, embryo E14.CNhs10519.395-14B147.58
whole body, embryo E16.CNhs10514.453-14F247.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G552.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G549.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G551.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G551.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G551.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G548.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G541.76
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G544.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G547.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G548.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G546.11
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.98
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G549.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G542.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G544.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G547.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G548.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G549.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G541.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G553.87
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G552.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G547.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.02
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.14
whole body, embryo E17.5.CNhs10513.490-9F955.94
whole body, embryo E17.CNhs10517.475-3I564.95
whole body, embryo E18.CNhs10516.493-3B369.71
whole body, neonate N00.CNhs10525.657-19C269.19
whole body, neonate N01.CNhs10576.659-23C664.27
whole body, neonate N06.CNhs10515.692-21D165.74
whole body, neonate N10.CNhs10518.761-6B454.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:113617327..113617376,-&oldid=1001982"