Personal tools

FFCP PHASE1:Mm9::chr9:113840108..113840184,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:113840108..113840184,+
|short_description=p2@Ubp1
|description=CAGE_peak_2_at_Ubp1_5end
|association_with_transcript=56bp_to_ENSMUST00000009885,ENSMUST00000084885,NM_001083319,NM_013699,uc009rwx.1,uc009rwy.1_5end
|EntrezGene=22221
|EntrezGene=22221
|HGNC=
|HGNC=
|UniProt=Q811S7
|UniProt=Q811S7
|association_with_transcript=56bp_to_ENSMUST00000009885,ENSMUST00000084885,NM_001083319,NM_013699,uc009rwx.1,uc009rwy.1_5end
|description=CAGE_peak_2_at_Ubp1_5end
|id=chr9:113840108..113840184,+
|ontology_enrichment_disease=
|phase1_expression=13.9329496981171,1.04692622291808,0.909998478779072,1.51232105653415,2.50447864973174,3.3575854382378,1.63528848416868,4.13194635013044,6.335492496825,2.80877431586392,8.56089841127525,2.31339261086476,6.67682846731702,1.83582845079895,7.99463428357591,6.88415909125408,9.09430441566591,6.78243655520211,8.91243818437302,2.54633791078818,2.72138528483423,4.56738375524072,6.79119451761232,0.95995453676044,2.06468352960453,1.14846392823004,0.86152399231815,0.430942465371778,0.190023419456374,1.26015064879965,0.886922042621219,5.71527606113668,3.69038872550742,0,5.48818077527422,4.82080471539628,6.12508068787107,7.11503772252743,4.6880120671428,4.71171369576418,5.88231488031014,4.09827290975067,4.36959317728038,3.14742044938943,3.34543873024398,4.40512205188036,2.34717403304412,2.8343270329458,1.31811709640683,2.3331587888914,2.51975558925653,1.43752564364972,9.89917375740644,10.8804321301702,9.74672017513146,1.80081605225163,3.72493471920384,4.12537673821954,12.3413041124355,12.6957835025288,13.3104594736298,2.03306719241479,3.55717918444456,2.6996991518442,1.97773272513395,2.8419204597844,1.79760066311043,1.15265491596466,7.56934169851887,8.50537411489651,6.09942387919008,6.85562362569129,3.53389665522582,9.18680994112155,9.39285615978716,6.43453150627015,3.30347642998166,8.17198963745201,5.9906547969935,13.8480602116704,12.6252948171325,14.5855743755893,8.37548997004143,3.93933827022176,8.40390362772456,4.71405736757868,4.9830088279686,7.26957838718672,2.80186915332781,2.64500460373749,4.05810284182349,3.44169550792555,2.03991400112325,5.93673510801599,3.89865850468601,4.92829575807069,1.40444420131752,2.21559419351475,1.81850203222008,1.7666978725517,5.35204995151386,3.84979432242953,7.64415719119937,21.3320010945999,3.68034769719064,3.04031838570118,3.53867111510348,2.05530983494308,8.54495016035667,6.82833839698194,8.84775166507293,7.61163695780353,7.37969591219387,7.68685466818375,7.4080885495494,2.76466500925286,7.41584903203122,5.20557684911682,3.5384422077995,6.14714029800155,5.96272099843063,5.33362778448744,3.72783522436244,16.1029438356351,17.5935233723302,2.55457055208591,5.75112597628417,4.19931911695385,3.93917703926501,15.5782264981016,16.9275223042892,16.9633375352367,16.6871347384585,20.7129520437568,14.7529511637288,14.4394724130304,12.9335992089902,6.34475550111474,3.53811861807145,6.73413938836717,11.0602376518298,11.9549094305406,13.6847218652065,13.1113191517072,15.7844678031081,11.2740073850668,12.3686276418842,10.3481348295606,15.5208954911646,13.9938499324186,17.7710635405588,15.3437012699302,13.3462679628287,11.1440693287093,8.43706759272568,16.7188784127534,1.40442637462647,3.86021860672073,5.39910648851626,14.0845525324141,11.4917769390737,10.8037236876609,7.33908680314152,9.83821158737019,8.17615698303105,7.20855228726264,6.43856163359086,11.2094728672483,10.5318303944627,7.38753588355929,11.2685645268739,8.77199924551994,9.00155472693308,6.03928884421673,16.4026159880019,19.0373532901676,0.991256348951394,1.32225283331772,11.7308537794379,12.7730169523241,10.5671318284117,8.0673409849337,6.89371935919098,3.61428689613862,5.69434873853414,1.97638745668813,5.7807098024062,6.56556357735798,5.26403035221624,2.69645822596266,1.94524244887225,3.38540164532424,14.9837641752935,8.91138398355885,11.270773567308,12.0154283428735,9.89157684554891,10.5905088034381,11.8252324422361,5.01874503130647,6.75094529717912,3.57851775373222,2.37162101669719,10.1775514486817,11.9900987019054,8.54476027062444,8.72298521970563,8.44120059133459,6.11102044275408,6.90470729881945,8.10676133875177,4.66754402419738,2.87536413054709,5.95425516269605,5.92871578917665,4.04126204715379,6.63770430031075,3.85954817090694,7.7596339869974,11.5589761179996,11.2445833744998,8.65699937453459,7.51008794523207,9.04533790185805,10.9500074807566,11.5128852236101,13.0837169608139,11.9590932410338,12.437471955284,8.84861899464985,6.73471429276993,6.79850575333104,7.53956419696361,2.17562273527484,0.491764273019036,8.27810238914197,10.4357883492065,10.6662634798905,2.62295912602681,5.04941854408746,3.15508219416257,2.73307121007647,3.44677436372478,5.4962823529087,6.01556420022464,7.64306633129848,3.23848561339915,4.09158201075837,4.74345333535828,22.1711708331047,10.9293865610367,14.4233138970477,13.3567306669932,10.5580878702423,10.619611067197,10.1967867185092,7.25576536715402,6.41257271170054,5.02013217897314,6.7635732547664,8.26970538138308,4.36240475373007,9.9819265947722,5.05658812697306,4.21674434299995,4.12542172992747,12.2558258071364,16.7456817449118,14.3588138998857,12.0028739617692,9.93105308396732,7.84822797449111,10.86023535974,8.22055362609418,5.16277757740163,8.89694697628045,3.30792597082443,8.73897140589844,8.88054346827481,8.86599996443891,7.63983001620073,9.02774948597837,2.91480836629851,8.90041449650446,6.66396435111626,9.90656966223468,8.70414278637645,9.23005439322986,8.06495943554049,10.2950177942935,9.00885678967433,8.39708713941948,11.746997773376,2.86401185404534,13.6024477239888,9.55601495496189,7.02034715341708,7.10900206449194,6.33251434863915,5.39457385539283,6.61227645802687,4.4498510137285,2.46268449254406,4.97071450469541,7.32800820289447,12.1108402295623,10.9202603701684,12.250424865675,6.58715099736429,10.1373675294467,11.5010093872839,10.0257376329842,10.3810750981454,7.9722759872582,5.76060012515731,12.324433704499,7.29810775044591,10.3738066736476,11.0432699531126,9.48841487037652,10.7287931581883,13.1013039976766,11.3720935924424,10.2985778947111,13.86963881121,13.6115349934735,12.0847772117293,10.8719381053572,13.2070899465173,5.44152920676507,1.33191572024439,2.87084341150322,6.04384618910682,6.56844619709447,6.19352168988901,10.6227942075014,5.78794623513478,3.51100472824754,16.3778034358949,8.28585425712918,10.3121192419091,15.9823459579629,8.22099023724771,15.8632718451837,12.1504050041725,11.2580300806055,12.6879874515577,13.4617681055473,15.1529527472898,21.1483182902546,13.8294220660849,11.1829089851415,10.8998844566551,9.92754945630076,8.44537565646138,9.27157757575024,11.5530915453053,7.58091635291392,9.37873409593887,9.24269072791773,9.36415074698824,10.5641501468034,9.13223956394251,10.0021675169445,9.96605203125757,8.87382414133043,11.9504911232959,8.83193520806384,7.20025430009372,7.63145966485151,11.921809497366,11.7730597472186,11.387235030255,9.56145069175945,10.426894453748,7.3659519202596,10.3211126522855,12.3451299764702,9.84670650430645,10.3429706494342,8.59385190656348,10.2258315182738,9.45242393807593,9.99242311751784,12.6323068560521,12.247650080753,10.7121465958552,6.17655973534643,6.4922993973718
|phase1_expression=13.9329496981171,1.04692622291808,0.909998478779072,1.51232105653415,2.50447864973174,3.3575854382378,1.63528848416868,4.13194635013044,6.335492496825,2.80877431586392,8.56089841127525,2.31339261086476,6.67682846731702,1.83582845079895,7.99463428357591,6.88415909125408,9.09430441566591,6.78243655520211,8.91243818437302,2.54633791078818,2.72138528483423,4.56738375524072,6.79119451761232,0.95995453676044,2.06468352960453,1.14846392823004,0.86152399231815,0.430942465371778,0.190023419456374,1.26015064879965,0.886922042621219,5.71527606113668,3.69038872550742,0,5.48818077527422,4.82080471539628,6.12508068787107,7.11503772252743,4.6880120671428,4.71171369576418,5.88231488031014,4.09827290975067,4.36959317728038,3.14742044938943,3.34543873024398,4.40512205188036,2.34717403304412,2.8343270329458,1.31811709640683,2.3331587888914,2.51975558925653,1.43752564364972,9.89917375740644,10.8804321301702,9.74672017513146,1.80081605225163,3.72493471920384,4.12537673821954,12.3413041124355,12.6957835025288,13.3104594736298,2.03306719241479,3.55717918444456,2.6996991518442,1.97773272513395,2.8419204597844,1.79760066311043,1.15265491596466,7.56934169851887,8.50537411489651,6.09942387919008,6.85562362569129,3.53389665522582,9.18680994112155,9.39285615978716,6.43453150627015,3.30347642998166,8.17198963745201,5.9906547969935,13.8480602116704,12.6252948171325,14.5855743755893,8.37548997004143,3.93933827022176,8.40390362772456,4.71405736757868,4.9830088279686,7.26957838718672,2.80186915332781,2.64500460373749,4.05810284182349,3.44169550792555,2.03991400112325,5.93673510801599,3.89865850468601,4.92829575807069,1.40444420131752,2.21559419351475,1.81850203222008,1.7666978725517,5.35204995151386,3.84979432242953,7.64415719119937,21.3320010945999,3.68034769719064,3.04031838570118,3.53867111510348,2.05530983494308,8.54495016035667,6.82833839698194,8.84775166507293,7.61163695780353,7.37969591219387,7.68685466818375,7.4080885495494,2.76466500925286,7.41584903203122,5.20557684911682,3.5384422077995,6.14714029800155,5.96272099843063,5.33362778448744,3.72783522436244,16.1029438356351,17.5935233723302,2.55457055208591,5.75112597628417,4.19931911695385,3.93917703926501,15.5782264981016,16.9275223042892,16.9633375352367,16.6871347384585,20.7129520437568,14.7529511637288,14.4394724130304,12.9335992089902,6.34475550111474,3.53811861807145,6.73413938836717,11.0602376518298,11.9549094305406,13.6847218652065,13.1113191517072,15.7844678031081,11.2740073850668,12.3686276418842,10.3481348295606,15.5208954911646,13.9938499324186,17.7710635405588,15.3437012699302,13.3462679628287,11.1440693287093,8.43706759272568,16.7188784127534,1.40442637462647,3.86021860672073,5.39910648851626,14.0845525324141,11.4917769390737,10.8037236876609,7.33908680314152,9.83821158737019,8.17615698303105,7.20855228726264,6.43856163359086,11.2094728672483,10.5318303944627,7.38753588355929,11.2685645268739,8.77199924551994,9.00155472693308,6.03928884421673,16.4026159880019,19.0373532901676,0.991256348951394,1.32225283331772,11.7308537794379,12.7730169523241,10.5671318284117,8.0673409849337,6.89371935919098,3.61428689613862,5.69434873853414,1.97638745668813,5.7807098024062,6.56556357735798,5.26403035221624,2.69645822596266,1.94524244887225,3.38540164532424,14.9837641752935,8.91138398355885,11.270773567308,12.0154283428735,9.89157684554891,10.5905088034381,11.8252324422361,5.01874503130647,6.75094529717912,3.57851775373222,2.37162101669719,10.1775514486817,11.9900987019054,8.54476027062444,8.72298521970563,8.44120059133459,6.11102044275408,6.90470729881945,8.10676133875177,4.66754402419738,2.87536413054709,5.95425516269605,5.92871578917665,4.04126204715379,6.63770430031075,3.85954817090694,7.7596339869974,11.5589761179996,11.2445833744998,8.65699937453459,7.51008794523207,9.04533790185805,10.9500074807566,11.5128852236101,13.0837169608139,11.9590932410338,12.437471955284,8.84861899464985,6.73471429276993,6.79850575333104,7.53956419696361,2.17562273527484,0.491764273019036,8.27810238914197,10.4357883492065,10.6662634798905,2.62295912602681,5.04941854408746,3.15508219416257,2.73307121007647,3.44677436372478,5.4962823529087,6.01556420022464,7.64306633129848,3.23848561339915,4.09158201075837,4.74345333535828,22.1711708331047,10.9293865610367,14.4233138970477,13.3567306669932,10.5580878702423,10.619611067197,10.1967867185092,7.25576536715402,6.41257271170054,5.02013217897314,6.7635732547664,8.26970538138308,4.36240475373007,9.9819265947722,5.05658812697306,4.21674434299995,4.12542172992747,12.2558258071364,16.7456817449118,14.3588138998857,12.0028739617692,9.93105308396732,7.84822797449111,10.86023535974,8.22055362609418,5.16277757740163,8.89694697628045,3.30792597082443,8.73897140589844,8.88054346827481,8.86599996443891,7.63983001620073,9.02774948597837,2.91480836629851,8.90041449650446,6.66396435111626,9.90656966223468,8.70414278637645,9.23005439322986,8.06495943554049,10.2950177942935,9.00885678967433,8.39708713941948,11.746997773376,2.86401185404534,13.6024477239888,9.55601495496189,7.02034715341708,7.10900206449194,6.33251434863915,5.39457385539283,6.61227645802687,4.4498510137285,2.46268449254406,4.97071450469541,7.32800820289447,12.1108402295623,10.9202603701684,12.250424865675,6.58715099736429,10.1373675294467,11.5010093872839,10.0257376329842,10.3810750981454,7.9722759872582,5.76060012515731,12.324433704499,7.29810775044591,10.3738066736476,11.0432699531126,9.48841487037652,10.7287931581883,13.1013039976766,11.3720935924424,10.2985778947111,13.86963881121,13.6115349934735,12.0847772117293,10.8719381053572,13.2070899465173,5.44152920676507,1.33191572024439,2.87084341150322,6.04384618910682,6.56844619709447,6.19352168988901,10.6227942075014,5.78794623513478,3.51100472824754,16.3778034358949,8.28585425712918,10.3121192419091,15.9823459579629,8.22099023724771,15.8632718451837,12.1504050041725,11.2580300806055,12.6879874515577,13.4617681055473,15.1529527472898,21.1483182902546,13.8294220660849,11.1829089851415,10.8998844566551,9.92754945630076,8.44537565646138,9.27157757575024,11.5530915453053,7.58091635291392,9.37873409593887,9.24269072791773,9.36415074698824,10.5641501468034,9.13223956394251,10.0021675169445,9.96605203125757,8.87382414133043,11.9504911232959,8.83193520806384,7.20025430009372,7.63145966485151,11.921809497366,11.7730597472186,11.387235030255,9.56145069175945,10.426894453748,7.3659519202596,10.3211126522855,12.3451299764702,9.84670650430645,10.3429706494342,8.59385190656348,10.2258315182738,9.45242393807593,9.99242311751784,12.6323068560521,12.247650080753,10.7121465958552,6.17655973534643,6.4922993973718
|short_description=p2@Ubp1
}}
}}

Revision as of 02:17, 19 April 2012

Short description:p2@Ubp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ubp1_5end
Coexpression cluster:NA
Association with transcript: 56bp_to_ENSMUST00000009885, ENSMUST00000084885, NM_001083319, NM_013699, uc009rwx.1, uc009rwy.1_5end
EntrezGene:Ubp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ubp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F116.96
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C611.06
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D413.11
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G812.37
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E215.52
forelimb, embryo E12.CNhs10600.359-14H213.99
forelimb, embryo E13.CNhs10589.384-1E217.77
forelimb, embryo E14.CNhs10577.413-26A815.34
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I616.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E311.21
heart, neonate N03.CNhs11221.1349-25I210.53
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G111.27
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G119.04
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I914.98
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D511.83
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F810.18
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F58.44
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F48.11
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A69.05
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E513.08
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C210.44
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I922.17
ovary, adult.CNhs10507.91-2I710.93
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E616.75
pituitary gland, embryo E13.CNhs11009.370-44C714.36
pituitary gland, embryo E14.CNhs11037.398-44A512.00
pituitary gland, embryo E15.CNhs10592.427-16B99.93
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G48.88
skin, neonate N03.CNhs11215.662-22H38.87
skin, neonate N06.CNhs11097.693-20I57.64
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D19.23
spleen, neonate N20.CNhs11112.824-19H18.06
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.75
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G89.56
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F512.11
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G512.25
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B711.50
testis, neonate N07.CNhs11222.726-26I410.03
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I210.37
thymus, embryo E16.CNhs11002.456-26C511.04
thymus, embryo E17.CNhs10581.478-18C19.49
thymus, embryo E18.CNhs10595.1273-19G410.73
thymus, neonate N02.CNhs11181.1541-43F813.10
thymus, neonate N03.CNhs11137.2104-43C711.37
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D313.87
thymus, neonate N10.CNhs11194.748-24E413.61
thymus, neonate N20.CNhs11186.820-7A212.08
thymus, neonate N25.CNhs11125.1362-25G710.87
thymus, neonate N30.CNhs11132.1393-42G213.21
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I815.15
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H213.83
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B312.63
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:113840108..113840184,%2B&oldid=1002027"