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FFCP PHASE1:Mm9::chr9:95758047..95758105,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:95758047..95758105,+
|short_description=p1@Atr
|description=CAGE_peak_1_at_Atr_5end
|association_with_transcript=-13bp_to_ENSMUST00000098471_5end
|EntrezGene=245000
|EntrezGene=245000
|HGNC=
|HGNC=
|UniProt=Q3UXJ0
|UniProt=Q3UXJ0
|association_with_transcript=-13bp_to_ENSMUST00000098471_5end
|description=CAGE_peak_1_at_Atr_5end
|id=chr9:95758047..95758105,+
|ontology_enrichment_disease=
|phase1_expression=13.2923543096979,4.53668029931169,2.27499619694768,0.60492842261366,0.500895729946347,8.89760141133016,9.34450562382103,25.0499247476658,15.3459707145317,15.9163877898956,29.4494905347869,21.3789386107502,24.6529051100936,21.5928393974924,22.6514638034651,19.4376256694233,15.3903613188192,35.1740314374435,33.8672651006175,24.6145998042858,70.1607143746326,18.2695350209629,20.112383763698,8.95957567643077,6.65286915094793,4.01962374880514,3.01533397311352,7.54149314400612,5.89072600314759,10.0812051903972,9.75614246883341,28.5763803056834,29.5231098040594,31.6963362030877,22.5304263405994,16.4572298904907,20.2127662699745,7.53356935326434,3.1253413780952,10.9939986234498,5.29408339227913,6.14740936462601,9.71020706062307,17.4996576986052,14.5982780956101,15.7850206859046,6.25913075478431,4.79655344036982,1.09843091367236,6.02732687130279,3.3596741190087,4.31257693094915,22.9862170299099,25.3876749703971,20.1656279485478,5.65970759279083,10.3152038377952,5.67239301505187,8.9019242778223,5.81890077199236,12.0427966666174,3.72728985276045,4.4464739805557,4.49949858640699,1.97773272513395,3.5524005747305,6.5912024314049,3.07374644257244,13.1685807631767,6.21027316325777,9.25429829946081,7.14127461009509,8.83474163806454,12.8615339175702,9.39285615978716,8.27296907949019,11.0115880999389,12.896421146604,11.366883460962,6.59431438650969,6.31264740856627,7.29278718779464,6.97957497503452,10.6924895906019,10.5430790965999,14.4368006882097,15.5185132071022,10.9975673036927,10.298762293313,10.8067330952703,22.3195656300292,10.3250865237766,7.47968467078526,7.55584468292944,24.6915038630114,21.0572636935748,17.2746636762055,6.81721290312231,8.83272415649754,7.42013106471715,13.661811718338,7.69958864485907,7.64415719119937,14.2213340630666,12.5564803786504,12.92135313923,14.6602089054287,20.4389144697117,31.3314839213078,16.3286352971307,11.1030609130327,12.1786191324856,13.3756988408514,14.0172055713939,18.6966044345771,14.0746582289237,9.88779870937496,13.3031408366319,15.0383793831479,16.0149181447935,14.7963817368464,14.5462575940567,13.0474232852686,18.1524094147159,14.4518227701284,8.43008282188352,21.6865375355716,20.3966928537759,18.4251829255944,12.4326230706003,19.2150253183823,16.8376831831238,14.6012428961512,10.9957646652042,10.389402227978,10.2211995732687,21.9973025916683,12.6895110022295,15.4160882644542,11.7847439296425,24.2024023910629,17.012755728077,21.7875177064473,22.0029034040144,28.2351471478011,26.2633126583942,22.3010104452155,19.6614561761652,12.0718076042392,23.070941780474,21.1141348996739,15.3437012699302,16.9608822027615,16.3678518265418,14.1989674121481,28.262865888226,26.6841011179029,23.6760074545538,16.76564646434,16.9843133479112,18.9966108584688,16.7457717158744,21.3070262026689,19.2828947112456,18.357786433598,20.2304531932855,16.3646774853768,15.880086561935,20.899100939012,17.7300861205423,12.5656654796076,11.1111990443253,16.9053588774109,11.2733391758712,9.46304768538573,16.4647379806855,2.97376904685418,9.78467096655114,19.1959425481711,22.0624838267417,18.8146493530256,19.3616183638409,15.1217069814512,11.6037631928661,9.49058123089023,8.72904460037258,8.54539709920916,11.1415624343044,12.6726656627428,13.4822911298133,10.59076444386,7.76650965692032,7.01771233526402,23.3066965723847,25.9227792048085,19.3468761453049,20.9468686141036,23.2149563836954,22.9548629761054,15.0562350939194,16.9558626068685,16.9054114572867,9.78293669387591,17.8524263116221,18.0834275504147,14.1663130802458,11.7658870405332,18.0882869814313,13.4951701444152,14.6725030099913,22.86106697528,20.0429831627299,17.2521847832825,17.1184835927512,20.9065240986756,19.4485736019276,20.2719077279761,13.9908621195376,18.4753190166605,19.8965982359009,22.1632367961155,20.5391553787978,17.8364588699262,20.2682571504597,18.3293603482231,15.6106918286239,21.438379598442,20.1532867580385,20.2507556195009,16.877921415721,14.3328534948693,12.150520920847,10.5553898757491,13.5976420954677,16.7199852826472,15.7283945393698,13.4862495589745,11.2523219128515,7.86887737808042,7.82659874333556,15.1443945319803,17.9601822376454,18.3109888072879,18.161628644394,17.8238939265915,17.5507449089076,19.02610297872,15.1973046113882,20.5549644532192,11.5675673911851,22.1426532924899,13.8891170860459,27.2021222120472,19.4664745107592,7.96470830039777,14.8096188054539,15.7208249621671,12.4479352638893,6.79194353625777,13.8345816574767,13.4382712447475,15.9954840970102,15.6858846489277,13.2735438333043,11.5960469432499,11.3449097573006,16.3411010761818,19.9867814374754,4.65691261617916,16.289614662401,19.6847659342924,11.5939731441346,16.9485491220185,9.13394847343798,9.62154003061212,13.1335883935569,11.688005096913,11.5420377059036,20.50598219038,20.6270203254293,18.6220856644893,20.0251897688975,7.86998258900597,12.7943458387252,18.6249260069659,16.3045625690946,17.0378965180135,20.720530270516,17.6335553760122,15.328137604837,19.0375841593118,17.0740771834863,17.8277966207707,3.81868247206045,21.3526795667266,19.9253077784312,18.468913280528,16.936151977172,13.7568415160092,16.0488572197937,16.2000773221658,10.7319936213452,9.20266310371729,13.0481255748254,370.346260715513,27.3615279260481,20.0204773453088,24.50084973135,17.307416346016,23.1469891922366,32.6253123435196,32.2906874412996,62.8107473110008,281.203916641471,252.602315488148,17.3806116345498,14.3934902856017,16.9473079321965,15.200736288402,16.2914293057408,14.9011016085949,17.5485356299155,18.0181223152984,19.183625490148,22.938248803155,18.6528442503155,19.8814076709095,17.0294959703383,19.9859502730483,12.2434407152214,15.0950448294364,8.25367480807176,10.0730769818447,19.318959403219,13.1377732815827,15.9341913112521,16.291996810009,12.5393026008841,9.60078132449013,13.8097570952153,14.3223878359849,16.1541991403066,10.9613203163303,15.107877947794,10.1253375034771,18.0128481289688,7.70342095273148,10.3552062350364,16.5021882658841,27.1336913912701,16.3904261523969,17.9898970630538,14.4633082213308,11.0306105070008,17.5574914963276,16.4828045791115,19.5760717851007,16.9307131881744,18.5039888919875,17.9195024316772,15.5444902400005,14.8538353579297,13.3250287977023,23.8146845641537,17.7303018695629,15.2398284166327,14.4230065281157,16.4862790550525,17.8292011240416,12.9557338496316,17.1674056762071,15.9881058295561,16.6573603335135,17.9382968730354,16.097661612804,15.7841826862706,14.2594319538155,19.0788372363631,17.0834426098811,17.7308068276014,19.6430900721451,15.3387472774106,19.4835677090953,11.4912865851455,13.1001700729429,18.693781702202,14.3466249051633,10.1472052794977,16.9263520002908
|phase1_expression=13.2923543096979,4.53668029931169,2.27499619694768,0.60492842261366,0.500895729946347,8.89760141133016,9.34450562382103,25.0499247476658,15.3459707145317,15.9163877898956,29.4494905347869,21.3789386107502,24.6529051100936,21.5928393974924,22.6514638034651,19.4376256694233,15.3903613188192,35.1740314374435,33.8672651006175,24.6145998042858,70.1607143746326,18.2695350209629,20.112383763698,8.95957567643077,6.65286915094793,4.01962374880514,3.01533397311352,7.54149314400612,5.89072600314759,10.0812051903972,9.75614246883341,28.5763803056834,29.5231098040594,31.6963362030877,22.5304263405994,16.4572298904907,20.2127662699745,7.53356935326434,3.1253413780952,10.9939986234498,5.29408339227913,6.14740936462601,9.71020706062307,17.4996576986052,14.5982780956101,15.7850206859046,6.25913075478431,4.79655344036982,1.09843091367236,6.02732687130279,3.3596741190087,4.31257693094915,22.9862170299099,25.3876749703971,20.1656279485478,5.65970759279083,10.3152038377952,5.67239301505187,8.9019242778223,5.81890077199236,12.0427966666174,3.72728985276045,4.4464739805557,4.49949858640699,1.97773272513395,3.5524005747305,6.5912024314049,3.07374644257244,13.1685807631767,6.21027316325777,9.25429829946081,7.14127461009509,8.83474163806454,12.8615339175702,9.39285615978716,8.27296907949019,11.0115880999389,12.896421146604,11.366883460962,6.59431438650969,6.31264740856627,7.29278718779464,6.97957497503452,10.6924895906019,10.5430790965999,14.4368006882097,15.5185132071022,10.9975673036927,10.298762293313,10.8067330952703,22.3195656300292,10.3250865237766,7.47968467078526,7.55584468292944,24.6915038630114,21.0572636935748,17.2746636762055,6.81721290312231,8.83272415649754,7.42013106471715,13.661811718338,7.69958864485907,7.64415719119937,14.2213340630666,12.5564803786504,12.92135313923,14.6602089054287,20.4389144697117,31.3314839213078,16.3286352971307,11.1030609130327,12.1786191324856,13.3756988408514,14.0172055713939,18.6966044345771,14.0746582289237,9.88779870937496,13.3031408366319,15.0383793831479,16.0149181447935,14.7963817368464,14.5462575940567,13.0474232852686,18.1524094147159,14.4518227701284,8.43008282188352,21.6865375355716,20.3966928537759,18.4251829255944,12.4326230706003,19.2150253183823,16.8376831831238,14.6012428961512,10.9957646652042,10.389402227978,10.2211995732687,21.9973025916683,12.6895110022295,15.4160882644542,11.7847439296425,24.2024023910629,17.012755728077,21.7875177064473,22.0029034040144,28.2351471478011,26.2633126583942,22.3010104452155,19.6614561761652,12.0718076042392,23.070941780474,21.1141348996739,15.3437012699302,16.9608822027615,16.3678518265418,14.1989674121481,28.262865888226,26.6841011179029,23.6760074545538,16.76564646434,16.9843133479112,18.9966108584688,16.7457717158744,21.3070262026689,19.2828947112456,18.357786433598,20.2304531932855,16.3646774853768,15.880086561935,20.899100939012,17.7300861205423,12.5656654796076,11.1111990443253,16.9053588774109,11.2733391758712,9.46304768538573,16.4647379806855,2.97376904685418,9.78467096655114,19.1959425481711,22.0624838267417,18.8146493530256,19.3616183638409,15.1217069814512,11.6037631928661,9.49058123089023,8.72904460037258,8.54539709920916,11.1415624343044,12.6726656627428,13.4822911298133,10.59076444386,7.76650965692032,7.01771233526402,23.3066965723847,25.9227792048085,19.3468761453049,20.9468686141036,23.2149563836954,22.9548629761054,15.0562350939194,16.9558626068685,16.9054114572867,9.78293669387591,17.8524263116221,18.0834275504147,14.1663130802458,11.7658870405332,18.0882869814313,13.4951701444152,14.6725030099913,22.86106697528,20.0429831627299,17.2521847832825,17.1184835927512,20.9065240986756,19.4485736019276,20.2719077279761,13.9908621195376,18.4753190166605,19.8965982359009,22.1632367961155,20.5391553787978,17.8364588699262,20.2682571504597,18.3293603482231,15.6106918286239,21.438379598442,20.1532867580385,20.2507556195009,16.877921415721,14.3328534948693,12.150520920847,10.5553898757491,13.5976420954677,16.7199852826472,15.7283945393698,13.4862495589745,11.2523219128515,7.86887737808042,7.82659874333556,15.1443945319803,17.9601822376454,18.3109888072879,18.161628644394,17.8238939265915,17.5507449089076,19.02610297872,15.1973046113882,20.5549644532192,11.5675673911851,22.1426532924899,13.8891170860459,27.2021222120472,19.4664745107592,7.96470830039777,14.8096188054539,15.7208249621671,12.4479352638893,6.79194353625777,13.8345816574767,13.4382712447475,15.9954840970102,15.6858846489277,13.2735438333043,11.5960469432499,11.3449097573006,16.3411010761818,19.9867814374754,4.65691261617916,16.289614662401,19.6847659342924,11.5939731441346,16.9485491220185,9.13394847343798,9.62154003061212,13.1335883935569,11.688005096913,11.5420377059036,20.50598219038,20.6270203254293,18.6220856644893,20.0251897688975,7.86998258900597,12.7943458387252,18.6249260069659,16.3045625690946,17.0378965180135,20.720530270516,17.6335553760122,15.328137604837,19.0375841593118,17.0740771834863,17.8277966207707,3.81868247206045,21.3526795667266,19.9253077784312,18.468913280528,16.936151977172,13.7568415160092,16.0488572197937,16.2000773221658,10.7319936213452,9.20266310371729,13.0481255748254,370.346260715513,27.3615279260481,20.0204773453088,24.50084973135,17.307416346016,23.1469891922366,32.6253123435196,32.2906874412996,62.8107473110008,281.203916641471,252.602315488148,17.3806116345498,14.3934902856017,16.9473079321965,15.200736288402,16.2914293057408,14.9011016085949,17.5485356299155,18.0181223152984,19.183625490148,22.938248803155,18.6528442503155,19.8814076709095,17.0294959703383,19.9859502730483,12.2434407152214,15.0950448294364,8.25367480807176,10.0730769818447,19.318959403219,13.1377732815827,15.9341913112521,16.291996810009,12.5393026008841,9.60078132449013,13.8097570952153,14.3223878359849,16.1541991403066,10.9613203163303,15.107877947794,10.1253375034771,18.0128481289688,7.70342095273148,10.3552062350364,16.5021882658841,27.1336913912701,16.3904261523969,17.9898970630538,14.4633082213308,11.0306105070008,17.5574914963276,16.4828045791115,19.5760717851007,16.9307131881744,18.5039888919875,17.9195024316772,15.5444902400005,14.8538353579297,13.3250287977023,23.8146845641537,17.7303018695629,15.2398284166327,14.4230065281157,16.4862790550525,17.8292011240416,12.9557338496316,17.1674056762071,15.9881058295561,16.6573603335135,17.9382968730354,16.097661612804,15.7841826862706,14.2594319538155,19.0788372363631,17.0834426098811,17.7308068276014,19.6430900721451,15.3387472774106,19.4835677090953,11.4912865851455,13.1001700729429,18.693781702202,14.3466249051633,10.1472052794977,16.9263520002908
|short_description=p1@Atr
}}
}}

Revision as of 03:58, 19 April 2012

Short description:p1@Atr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atr_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000098471_5end
EntrezGene:Atr
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Atr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A433.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A370.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.11
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I328.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G629.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.99
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.00
Mouse Schwann, donor1.CNhs12507.11728-123D910.30
Mouse Schwann, donor2.CNhs12573.11746-123F910.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.44
accessory axillary lymph node, adult.CNhs10475.1063-29H931.33
adrenal gland, adult.CNhs10508.49-24D716.33
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F514.02
adrenal gland, neonate N00.CNhs11191.1311-23C118.70
adrenal gland, neonate N25.CNhs11223.1377-27I314.07
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F516.01
bone (os femoris), neonate N16.CNhs11225.1525-43A614.80
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.69
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.43
corpora quadrigemina, adult.CNhs10501.16-22A412.43
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F116.84
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.69
epididymis, adult.CNhs10490.58-23B215.42
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C624.20
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D422.00
eyeball, neonate N00.CNhs11207.633-15C628.24
eyeball, neonate N01.CNhs11140.1532-43E726.26
eyeball, neonate N02.CNhs11205.1551-44G822.30
eyeball, neonate N16.CNhs11188.777-19A219.66
forelimb, embryo E11.CNhs10596.335-25E212.07
forelimb, embryo E12.CNhs10600.359-14H223.07
forelimb, embryo E13.CNhs10589.384-1E221.11
forelimb, embryo E14.CNhs10577.413-26A815.34
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I628.26
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.68
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.77
heart, embryo E11.CNhs10586.331-24E916.98
heart, embryo E12.CNhs11015.353-12F519.00
heart, embryo E13.CNhs11013.376-3I916.75
heart, embryo E14.CNhs10597.403-26D421.31
heart, embryo E15.CNhs11017.431-16C819.28
heart, embryo E16.CNhs11021.457-17C618.36
heart, embryo E17.CNhs11025.479-18E520.23
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E315.88
heart, neonate N03.CNhs11221.1349-25I220.90
heart, neonate N10.CNhs11118.749-24G117.73
heart, neonate N16.CNhs11209.782-15G112.57
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D316.91
heart, neonate N30.CNhs11202.1390-42D211.27
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G116.46
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I519.20
intestine, embryo E13.CNhs11010.381-16D522.06
intestine, embryo E15.CNhs10602.976-16D818.81
intestine, embryo E16.CNhs10585.463-22H419.36
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F711.60
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A512.67
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E310.59
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F823.31
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G723.21
kidney, neonate N10.CNhs11206.758-6D522.95
kidney, neonate N20.CNhs11113.832-19I115.06
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H116.91
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F817.85
liver, embryo E13.CNhs10524.378-3H618.08
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D711.77
liver, embryo E16.CNhs10523.462-17F518.09
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F422.86
liver, neonate N03.CNhs11123.1345-25G220.04
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H217.12
liver, neonate N10.CNhs11115.751-24B920.91
liver, neonate N20.CNhs11220.823-25A319.45
liver, neonate N25.CNhs11198.1368-26H120.27
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B118.48
lung, embryo E12.CNhs10522.354-16G219.90
lung, embryo E14.CNhs10604.404-26F822.16
lung, embryo E15.CNhs11020.432-17C520.54
lung, embryo E16.CNhs10998.458-17B617.84
lung, embryo E17.CNhs10605.480-44A620.27
lung, embryo E18.CNhs10583.1287-20I618.33
lung, neonate N00.CNhs11224.640-42C615.61
lung, neonate N06.CNhs11212.683-20E521.44
lung, neonate N07.CNhs11111.715-19A320.15
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A416.88
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C213.49
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I722.14
ovary, embryo E18.CNhs11040.505-44H713.89
ovary, neonate N00.CNhs11217.1299-22I427.20
oviduct, adult pregnant day01.CNhs10500.988-6G619.47
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F414.81
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E512.45
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G816.34
pituitary gland, embryo E12.CNhs11018.346-16E619.99
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F611.59
pituitary gland, embryo E17.CNhs11039.1265-44F516.95
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G313.13
prostate, adult.CNhs10470.859-1F811.69
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G420.51
skin, neonate N03.CNhs11215.662-22H320.63
skin, neonate N06.CNhs11097.693-20I518.62
skin, neonate N10.CNhs11108.762-6C420.03
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G218.62
spleen, embryo E16.CNhs11035.461-43C116.30
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D120.72
spleen, neonate N20.CNhs11112.824-19H117.63
spleen, neonate N25.CNhs11099.1354-25G315.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E321.35
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D418.47
stomach, embryo E17.CNhs11006.1035-18D516.94
stomach, embryo E18.CNhs10999.1286-20C613.76
stomach, neonate N03.CNhs11193.1340-24B816.05
stomach, neonate N07.CNhs11210.718-18A916.20
stomach, neonate N25.CNhs11104.1355-25E410.73
stomach, neonate N30.CNhs11134.1386-42I19.20
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G5370.35
testis, embryo E13.CNhs11031.389-23F527.36
testis, embryo E15.CNhs11034.443-27C520.02
testis, embryo E16.CNhs11033.470-26G524.50
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G523.15
testis, neonate N00.CNhs11189.1300-22B732.63
testis, neonate N07.CNhs11222.726-26I432.29
testis, neonate N10.CNhs11204.763-44D962.81
testis, neonate N20.CNhs11110.839-18H3281.20
testis, neonate N30.CNhs11130.1391-42E2252.60
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I414.39
thymus, embryo E15.CNhs11005.430-45I216.95
thymus, embryo E16.CNhs11002.456-26C515.20
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F817.55
thymus, neonate N03.CNhs11137.2104-43C718.02
thymus, neonate N06.CNhs11197.681-26C419.18
thymus, neonate N07.CNhs11211.713-19D322.94
thymus, neonate N10.CNhs11194.748-24E418.65
thymus, neonate N20.CNhs11186.820-7A219.88
thymus, neonate N25.CNhs11125.1362-25G717.03
thymus, neonate N30.CNhs11132.1393-42G219.99
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.07
urinary bladder, adult.CNhs10481.879-12E419.32
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D516.29
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I816.50
whole body, embryo E12.CNhs10587.857-27C927.13
whole body, embryo E13.CNhs10512.372-23H216.39
whole body, embryo E14.5.CNhs10578.420-27D217.99
whole body, embryo E14.CNhs10519.395-14B114.46
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F919.48
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C218.69
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B416.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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