Personal tools

FFCP PHASE1:Mm9::chrX:45807450..45807478,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:45807450..45807478,-
|short_description=p3@Elf4
|description=CAGE_peak_3_at_Elf4_5end
|association_with_transcript=-104bp_to_ENSMUST00000114958,uc009tce.2_5end
|EntrezGene=56501
|EntrezGene=56501
|HGNC=
|HGNC=
|UniProt=Q9Z2U4
|UniProt=Q9Z2U4
|association_with_transcript=-104bp_to_ENSMUST00000114958,uc009tce.2_5end
|description=CAGE_peak_3_at_Elf4_5end
|id=chrX:45807450..45807478,-
|ontology_enrichment_disease=
|phase1_expression=0.160148847104794,5.23463111459042,3.18499467572675,4.83942738090928,3.50627010962443,4.19698179779725,2.80335168714631,6.32704284863724,3.09735188733667,5.38348410540585,0.34243593645101,2.31339261086476,5.13602189793617,6.6439505838438,1.66554880907831,3.23960427823721,0.699561878128147,4.41647031501533,4.38766187538364,4.2438965179803,2.12608225377674,3.47518329203099,1.82839852397255,4.7997726838022,2.52350209173887,5.16808767703518,3.87685796543167,3.878482188346,3.04037471130198,6.04872311423834,3.76941868114018,0,0.61506478758457,0,1.44425809875637,1.82858109894342,1.63335485009895,10.8818223991596,8.5946887897618,4.18818995179039,9.99993529652724,15.0270006690858,11.6522484727477,2.01434908760924,1.52065396829272,2.20256102594018,4.69434806608824,1.09012578190223,2.41654801007919,1.74986909166855,2.37976916763116,0,5.20126078778983,2.90144856804538,6.72187598284928,1.28629718017973,1.71920063963254,2.06268836910977,0.202316460859598,0,0,4.74382344896785,2.66788438833342,2.2497492932035,7.9109309005358,3.5524005747305,2.39680088414724,2.30530983192933,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,1.13589289999776,1.058001841495,3.76823835312181,0,0.679971333707751,0,0,0.448026887097336,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,0,0,5.09610479413291,0,0.865964164044856,1.26679932737549,0,1.48439043634778,8.80388804400384,1.63286352971307,3.29622120855658,2.13125834818499,1.84492397804847,2.11011696773672,3.64524992120685,1.63366568728578,2.71914464507811,3.47038456607788,5.30766331169925,4.36770494858005,4.85851340612866,2.90925151881133,5.59175283654366,0.292780797011547,0,5.8755122697976,3.95389910869537,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,3.86989582631202,2.36373244159177,0,0.210441855886474,0.520481771850815,0.229902104433473,0.900310649026746,1.65775299619287,1.02054748726992,1.15302348256365,0.843315521037559,1.03481348295606,0.215567992932842,0.378212160335639,1.40760899331159,1.97276159184817,3.05851974148158,1.74126083261083,2.05782136407943,2.9855140022774,2.1066395619397,1.80143534980301,1.13665399758237,4.14251545071004,6.3322036194896,3.6012412292203,4.97163944728941,4.9191057936851,3.70241070929708,3.72054311600653,4.29237442239391,4.67061369468678,3.62031669809657,1.31333971263276,2.59420190546738,2.04679982395465,2.85415149878366,2.14730270016595,0,0.102904612379284,7.93005079161115,5.55346189993443,2.55945900642281,2.32236671860439,4.51036114627327,5.84882221407693,5.11469500843202,5.51654315726422,6.16887780007865,5.10566759644434,5.27803938480566,7.75930240960488,6.82374304916921,6.29173586057955,7.78096979548899,5.37681437786791,1.70701110857774,1.37098215131675,2.25415471346161,2.24016460629846,1.16371492300575,2.10407459670956,2.02356918797623,0.738050739898011,0.156998727841375,0.616985819609003,0.889357881261447,1.33476084572875,1.76903095601883,2.02375901146368,2.84004169943904,1.68824011826692,2.29163266603278,2.30156909960649,2.10775794807546,0.823684239564244,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,5.72734889516475,0.568474235311454,2.44447464663039,2.54617628662782,1.64283173801951,2.1775813467436,2.61848004974615,3.51240566144038,2.52216230569906,2.87904096543407,2.23236676120482,2.94953966488328,2.41758974612254,3.61622646453779,1.50791283939272,3.80733978673097,0.491764273019036,0.551873492609465,0.321101179975584,0,1.14754461763673,2.52470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,1.18586333383957,0,3.12268187458191,3.5613120733451,3.09485222771795,2.3095817216155,0,4.37005145078967,4.83717691143602,3.39489143560617,2.65771703592696,3.99665692327106,6.20227903603731,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,1.78368817602071,0.658196082408484,0,4.4587624532105,0.847328283455281,0.220528398054962,2.4732937941222,4.03661066739764,2.29189114726992,2.38744688006273,1.80554989719567,3.20628920292836,0.18542530201051,4.78438466233988,4.33412422722767,4.62986318424279,2.44878994106098,3.00727300986255,4.34678529092393,3.90950388985867,2.23922323717853,2.76399947608848,2.86401185404534,2.05618395827738,3.86306987541013,3.99619761040665,2.71814784818809,3.05707589244649,3.50647300600534,2.97552440611209,3.14107130380836,6.99920855775682,0.621339313086926,0.56369293868419,2.99033092087958,3.47462829959905,3.88902376688095,2.84151611651008,2.87225413334323,4.5769323071844,4.29674469985035,3.56521771047417,1.44950472495604,0.864090018773596,8.84831137758899,2.22997736819181,2.87590680061516,4.67714962720062,7.16106782669926,6.15912199821921,6.12996792551841,6.20296014133224,8.07731599585181,6.17275133905499,8.57022573663144,7.9915462206597,8.65906574762965,8.41513695707296,1.13365191807606,3.32978930061097,3.85769583420746,2.68615386182526,2.31827512838629,4.31669693537719,3.6630324853453,3.00115730710692,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,1.99512436700516,1.36586884603307,1.21553358534147,2.93458427679175,1.83843508450014,2.44471400581777,1.23621034343337,1.92551525755089,1.51618327058278,2.28131369901216,0.943131706930381,2.1537546718073,3.07320731543373,2.46972516509137,3.33405583898152,1.62238056322798,2.12200142510076,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,2.07040636913727,2.70766745253365,1.64635175585495,1.31534855718921,1.90125759384206,2.24456908663095,3.6776855618494,2.1670986122624,1.22769312950907,2.47898945897546,2.70069255373598,1.74867404556562,2.10538447600868,2.79332370262788,1.72159498861959,1.10295709559758,3.94175320554716
|phase1_expression=0.160148847104794,5.23463111459042,3.18499467572675,4.83942738090928,3.50627010962443,4.19698179779725,2.80335168714631,6.32704284863724,3.09735188733667,5.38348410540585,0.34243593645101,2.31339261086476,5.13602189793617,6.6439505838438,1.66554880907831,3.23960427823721,0.699561878128147,4.41647031501533,4.38766187538364,4.2438965179803,2.12608225377674,3.47518329203099,1.82839852397255,4.7997726838022,2.52350209173887,5.16808767703518,3.87685796543167,3.878482188346,3.04037471130198,6.04872311423834,3.76941868114018,0,0.61506478758457,0,1.44425809875637,1.82858109894342,1.63335485009895,10.8818223991596,8.5946887897618,4.18818995179039,9.99993529652724,15.0270006690858,11.6522484727477,2.01434908760924,1.52065396829272,2.20256102594018,4.69434806608824,1.09012578190223,2.41654801007919,1.74986909166855,2.37976916763116,0,5.20126078778983,2.90144856804538,6.72187598284928,1.28629718017973,1.71920063963254,2.06268836910977,0.202316460859598,0,0,4.74382344896785,2.66788438833342,2.2497492932035,7.9109309005358,3.5524005747305,2.39680088414724,2.30530983192933,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,1.13589289999776,1.058001841495,3.76823835312181,0,0.679971333707751,0,0,0.448026887097336,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,0,0,5.09610479413291,0,0.865964164044856,1.26679932737549,0,1.48439043634778,8.80388804400384,1.63286352971307,3.29622120855658,2.13125834818499,1.84492397804847,2.11011696773672,3.64524992120685,1.63366568728578,2.71914464507811,3.47038456607788,5.30766331169925,4.36770494858005,4.85851340612866,2.90925151881133,5.59175283654366,0.292780797011547,0,5.8755122697976,3.95389910869537,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,3.86989582631202,2.36373244159177,0,0.210441855886474,0.520481771850815,0.229902104433473,0.900310649026746,1.65775299619287,1.02054748726992,1.15302348256365,0.843315521037559,1.03481348295606,0.215567992932842,0.378212160335639,1.40760899331159,1.97276159184817,3.05851974148158,1.74126083261083,2.05782136407943,2.9855140022774,2.1066395619397,1.80143534980301,1.13665399758237,4.14251545071004,6.3322036194896,3.6012412292203,4.97163944728941,4.9191057936851,3.70241070929708,3.72054311600653,4.29237442239391,4.67061369468678,3.62031669809657,1.31333971263276,2.59420190546738,2.04679982395465,2.85415149878366,2.14730270016595,0,0.102904612379284,7.93005079161115,5.55346189993443,2.55945900642281,2.32236671860439,4.51036114627327,5.84882221407693,5.11469500843202,5.51654315726422,6.16887780007865,5.10566759644434,5.27803938480566,7.75930240960488,6.82374304916921,6.29173586057955,7.78096979548899,5.37681437786791,1.70701110857774,1.37098215131675,2.25415471346161,2.24016460629846,1.16371492300575,2.10407459670956,2.02356918797623,0.738050739898011,0.156998727841375,0.616985819609003,0.889357881261447,1.33476084572875,1.76903095601883,2.02375901146368,2.84004169943904,1.68824011826692,2.29163266603278,2.30156909960649,2.10775794807546,0.823684239564244,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,5.72734889516475,0.568474235311454,2.44447464663039,2.54617628662782,1.64283173801951,2.1775813467436,2.61848004974615,3.51240566144038,2.52216230569906,2.87904096543407,2.23236676120482,2.94953966488328,2.41758974612254,3.61622646453779,1.50791283939272,3.80733978673097,0.491764273019036,0.551873492609465,0.321101179975584,0,1.14754461763673,2.52470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,1.18586333383957,0,3.12268187458191,3.5613120733451,3.09485222771795,2.3095817216155,0,4.37005145078967,4.83717691143602,3.39489143560617,2.65771703592696,3.99665692327106,6.20227903603731,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,1.78368817602071,0.658196082408484,0,4.4587624532105,0.847328283455281,0.220528398054962,2.4732937941222,4.03661066739764,2.29189114726992,2.38744688006273,1.80554989719567,3.20628920292836,0.18542530201051,4.78438466233988,4.33412422722767,4.62986318424279,2.44878994106098,3.00727300986255,4.34678529092393,3.90950388985867,2.23922323717853,2.76399947608848,2.86401185404534,2.05618395827738,3.86306987541013,3.99619761040665,2.71814784818809,3.05707589244649,3.50647300600534,2.97552440611209,3.14107130380836,6.99920855775682,0.621339313086926,0.56369293868419,2.99033092087958,3.47462829959905,3.88902376688095,2.84151611651008,2.87225413334323,4.5769323071844,4.29674469985035,3.56521771047417,1.44950472495604,0.864090018773596,8.84831137758899,2.22997736819181,2.87590680061516,4.67714962720062,7.16106782669926,6.15912199821921,6.12996792551841,6.20296014133224,8.07731599585181,6.17275133905499,8.57022573663144,7.9915462206597,8.65906574762965,8.41513695707296,1.13365191807606,3.32978930061097,3.85769583420746,2.68615386182526,2.31827512838629,4.31669693537719,3.6630324853453,3.00115730710692,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,1.99512436700516,1.36586884603307,1.21553358534147,2.93458427679175,1.83843508450014,2.44471400581777,1.23621034343337,1.92551525755089,1.51618327058278,2.28131369901216,0.943131706930381,2.1537546718073,3.07320731543373,2.46972516509137,3.33405583898152,1.62238056322798,2.12200142510076,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,2.07040636913727,2.70766745253365,1.64635175585495,1.31534855718921,1.90125759384206,2.24456908663095,3.6776855618494,2.1670986122624,1.22769312950907,2.47898945897546,2.70069255373598,1.74867404556562,2.10538447600868,2.79332370262788,1.72159498861959,1.10295709559758,3.94175320554716
|short_description=p3@Elf4
}}
}}

Revision as of 04:45, 19 April 2012

Short description:p3@Elf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Elf4_5end
Coexpression cluster:NA
Association with transcript: -104bp_to_ENSMUST00000114958, uc009tce.2_5end
EntrezGene:Elf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Elf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D36.17
thymus, neonate N10.CNhs11194.748-24E48.57
thymus, neonate N20.CNhs11186.820-7A27.99
thymus, neonate N25.CNhs11125.1362-25G78.66
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:45807450..45807478,-&oldid=1023881"