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{{Coexpression_clusters
{{Coexpression_clusters
|full_id=C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate
|full_id=C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate
|gostat_on_coexpression_clusters=GO:0005764!lysosome!1.0480335735187e-12!1508;2760;54;5641;1512;1509;5660;1522;10437$GO:0000323!lytic vacuole!1.0480335735187e-12!1508;2760;54;5641;1512;1509;5660;1522;10437$GO:0005773!vacuole!2.55788396001967e-12!1508;2760;54;5641;1512;1509;5660;1522;10437$GO:0048770!pigment granule!2.00977059816662e-05!1508;1509;10457;822$GO:0042470!melanosome!2.00977059816662e-05!1508;1509;10457;822$GO:0004197!cysteine-type endopeptidase activity!0.000144102989006187!1508;1522;5641;1512$GO:0044444!cytoplasmic part!0.000543690591520644!1508;2760;54;5641;10457;822;1512;5660;1509;1522;23646;10437$GO:0004175!endopeptidase activity!0.000543690591520644!1508;1509;4318;1522;5641;1512$GO:0016787!hydrolase activity!0.000695068473515278!1508;4318;2760;54;5641;1512;5660;1509;1522;6035;23646$GO:0008234!cysteine-type peptidase activity!0.00148800656465349!1508;1522;5641;1512$GO:0043231!intracellular membrane-bound organelle!0.00148800656465349!1508;7942;10734;2760;54;5641;10457;822;1512;5660;1509;3663;1522;23646;10437$GO:0043227!membrane-bound organelle!0.00148800656465349!1508;7942;10734;2760;54;5641;10457;822;1512;5660;1509;3663;1522;23646;10437$GO:0006687!glycosphingolipid metabolic process!0.00203212951820557!5660;2760$GO:0016023!cytoplasmic membrane-bound vesicle!0.00203212951820557!1508;1509;10457;822$GO:0031988!membrane-bound vesicle!0.00203212951820557!1508;1509;10457;822$GO:0008233!peptidase activity!0.00302605906957373!1508;1509;4318;1522;5641;1512$GO:0006664!glycolipid metabolic process!0.00324472019915184!5660;2760$GO:0031410!cytoplasmic vesicle!0.00324472019915184!1508;1509;10457;822$GO:0005737!cytoplasm!0.00324472019915184!1508;2760;54;5641;10457;822;4481;1512;5660;1509;1522;23646;10437$GO:0031982!vesicle!0.00324472019915184!1508;1509;10457;822$GO:0006508!proteolysis!0.00324472019915184!1508;1509;4318;1522;5641;1512$GO:0042007!interleukin-18 binding!0.00828775827557786!10068$GO:0030290!sphingolipid activator protein activity!0.00828775827557786!2760$GO:0032428!beta-N-acetylgalactosaminidase activity!0.00828775827557786!2760$GO:0004213!cathepsin B activity!0.00828775827557786!1508$GO:0004192!cathepsin D activity!0.00828775827557786!1509$GO:0004215!cathepsin H activity!0.00828775827557786!1512$GO:0004229!gelatinase B activity!0.00828775827557786!4318$GO:0030984!kininogen binding!0.00828775827557786!1508$GO:0006665!sphingolipid metabolic process!0.0115021181945284!5660;2760$GO:0043229!intracellular organelle!0.0123213930737607!1508;7942;10734;2760;54;5641;10457;822;1512;5660;1509;3663;1522;23646;10437$GO:0043226!organelle!0.0123213930737607!1508;7942;10734;2760;54;5641;10457;822;1512;5660;1509;3663;1522;23646;10437$GO:0004098!cerebroside-sulfatase activity!0.0123213930737607!5660$GO:0005889!hydrogen:potassium-exchanging ATPase complex!0.0123213930737607!2760$GO:0004557!alpha-galactosidase activity!0.0123213930737607!5660$GO:0016004!phospholipase activator activity!0.0123213930737607!2760$GO:0045179!apical cortex!0.0123213930737607!2760$GO:0030156!benzodiazepine receptor binding!0.0123213930737607!1622$GO:0009313!oligosaccharide catabolic process!0.0123213930737607!2760$GO:0045177!apical part of cell!0.0137390754098811!1508;2760$GO:0005319!lipid transporter activity!0.0166542704452397!2760;4481$GO:0004336!galactosylceramidase activity!0.0171563837113442!5660$GO:0004563!beta-N-acetylhexosaminidase activity!0.0218283282762773!2760$GO:0006689!ganglioside catabolic process!0.0218283282762773!2760$GO:0046479!glycosphingolipid catabolic process!0.0255355193792421!2760$GO:0008133!collagenase activity!0.0255355193792421!4318$GO:0004348!glucosylceramidase activity!0.0255355193792421!5660$GO:0006869!lipid transport!0.0266617983691264!5660;2760$GO:0044424!intracellular part!0.0266617983691264!7942;10734;54;10457;1512;3663;10437;1508;2760;5641;822;4481;1509;5660;1522;23646$GO:0008081!phosphoric diester hydrolase activity!0.0266617983691264!5660;23646$GO:0007130!synaptonemal complex assembly!0.0266617983691264!10734$GO:0004630!phospholipase D activity!0.0266617983691264!23646$GO:0009898!internal side of plasma membrane!0.0266617983691264!2760$GO:0001509!legumain activity!0.0266617983691264!5641$GO:0016042!lipid catabolic process!0.0282327712385623!2760;23646$GO:0019377!glycolipid catabolic process!0.0294364417697988!2760$GO:0007129!synapsis!0.0294364417697988!10734$GO:0005102!receptor binding!0.0294364417697988!57817;1622;2896;10068$GO:0005615!extracellular space!0.0314492967441854!5660;2896;4318$GO:0019915!sequestering of lipid!0.0314492967441854!2760$GO:0001573!ganglioside metabolic process!0.0314492967441854!2760$GO:0004767!sphingomyelin phosphodiesterase activity!0.0337110872120385!5660$GO:0030547!receptor inhibitor activity!0.0337110872120385!10068$GO:0048019!receptor antagonist activity!0.0337110872120385!10068$GO:0042578!phosphoric ester hydrolase activity!0.0360876906578836!5660;23646;54$GO:0016788!hydrolase activity, acting on ester bonds!0.0371161970695443!5660;6035;23646;54$GO:0004553!hydrolase activity, hydrolyzing O-glycosyl compounds!0.0371161970695443!5660;2760$GO:0030545!receptor regulator activity!0.0371161970695443!10068$GO:0003709!RNA polymerase III transcription factor activity!0.0371161970695443!3663$GO:0030225!macrophage differentiation!0.0371161970695443!4318$GO:0004565!beta-galactosidase activity!0.0371161970695443!5660$GO:0042088!T-helper 1 type immune response!0.0383185081814939!10068$GO:0017040!ceramidase activity!0.0383185081814939!5660$GO:0015925!galactosidase activity!0.0383185081814939!5660$GO:0050832!defense response to fungus!0.0383185081814939!57817$GO:0000795!synaptonemal complex!0.0409522584277374!10734$GO:0016798!hydrolase activity, acting on glycosyl bonds!0.0445242020859973!5660;2760$GO:0030149!sphingolipid catabolic process!0.0460112216962742!2760
|id=C71
|id=C71
}}
}}

Revision as of 17:41, 18 May 2012


Full id: C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate



Phase1 CAGE Peaks

Hg19::chr10:73576479..73576520,-p@chr10:73576479..73576520
-
Hg19::chr10:73576587..73576627,-p@chr10:73576587..73576627
-
Hg19::chr10:73576634..73576697,-p@chr10:73576634..73576697
-
Hg19::chr10:73576748..73576784,-p@chr10:73576748..73576784
-
Hg19::chr10:73576943..73576992,-p@chr10:73576943..73576992
-
Hg19::chr10:73577115..73577138,-p@chr10:73577115..73577138
-
Hg19::chr10:73577179..73577199,-p@chr10:73577179..73577199
-
Hg19::chr10:73578407..73578437,-p@chr10:73578407..73578437
-
Hg19::chr10:73578451..73578484,-p@chr10:73578451..73578484
-
Hg19::chr10:73579349..73579361,-p12@PSAP
Hg19::chr10:73579502..73579547,-p8@PSAP
Hg19::chr10:73587869..73587888,-p10@PSAP
Hg19::chr10:73587891..73587911,-p7@PSAP
Hg19::chr10:73588734..73588747,-p@chr10:73588734..73588747
-
Hg19::chr10:73594214..73594228,-p@chr10:73594214..73594228
-
Hg19::chr10:90973626..90973639,-p@chr10:90973626..90973639
-
Hg19::chr10:90973693..90973714,-p@chr10:90973693..90973714
-
Hg19::chr10:90973819..90973831,-p@chr10:90973819..90973831
-
Hg19::chr10:90974066..90974077,-p@chr10:90974066..90974077
-
Hg19::chr10:90974131..90974169,-p@chr10:90974131..90974169
-
Hg19::chr10:90974711..90974729,-p@chr10:90974711..90974729
-
Hg19::chr10:91015076..91015080,-p@chr10:91015076..91015080
-
Hg19::chr11:1774064..1774105,-p@chr11:1774064..1774105
-
Hg19::chr11:1774498..1774510,-p@chr11:1774498..1774510
-
Hg19::chr11:1774658..1774701,+p1@CU677606
Hg19::chr11:1774749..1774770,+p3@CU677606
Hg19::chr11:1774801..1774823,-p@chr11:1774801..1774823
-
Hg19::chr11:1774825..1774836,-p@chr11:1774825..1774836
-
Hg19::chr11:1774844..1774871,-p@chr11:1774844..1774871
-
Hg19::chr11:1775060..1775078,+p@chr11:1775060..1775078
+
Hg19::chr11:1775060..1775079,-p@chr11:1775060..1775079
-
Hg19::chr11:1775091..1775120,-p@chr11:1775091..1775120
-
Hg19::chr11:1775126..1775138,-p@chr11:1775126..1775138
-
Hg19::chr11:1775243..1775259,-p@chr11:1775243..1775259
-
Hg19::chr11:1775310..1775334,-p@chr11:1775310..1775334
-
Hg19::chr11:1775341..1775367,-p@chr11:1775341..1775367
-
Hg19::chr11:1776214..1776241,-p5@CTSD
Hg19::chr11:1778687..1778733,-p4@CTSD
Hg19::chr11:1778761..1778780,-p7@CTSD
Hg19::chr11:1780220..1780247,-p@chr11:1780220..1780247
-
Hg19::chr11:1780261..1780321,-p1@ENST00000427721
Hg19::chr11:1782603..1782619,-p@chr11:1782603..1782619
-
Hg19::chr11:1782625..1782656,-p@chr11:1782625..1782656
-
Hg19::chr11:58977610..58977614,-p@chr11:58977610..58977614
-
Hg19::chr11:61129827..61129874,+p1@TMEM138
Hg19::chr11:6635181..6635193,-p@chr11:6635181..6635193
-
Hg19::chr11:6635265..6635378,-p@chr11:6635265..6635378
-
Hg19::chr11:6635379..6635461,-p@chr11:6635379..6635461
-
Hg19::chr11:6635464..6635489,-p@chr11:6635464..6635489
-
Hg19::chr11:6635581..6635603,-p@chr11:6635581..6635603
-
Hg19::chr11:6635612..6635641,-p@chr11:6635612..6635641
-
Hg19::chr11:6635655..6635679,-p@chr11:6635655..6635679
-
Hg19::chr11:6635712..6635734,-p@chr11:6635712..6635734
-
Hg19::chr11:6635737..6635756,+p1@CU677100
Hg19::chr11:6635738..6635779,-p@chr11:6635738..6635779
-
Hg19::chr11:6635815..6635831,-p@chr11:6635815..6635831
-
Hg19::chr11:71709899..71709904,+p11@IL18BP
Hg19::chr11:71711506..71711524,+p@chr11:71711506..71711524
+
Hg19::chr11:71712835..71712858,+p4@IL18BP
Hg19::chr11:71712896..71712913,+p3@IL18BP
Hg19::chr11:71712944..71712962,+p10@IL18BP
Hg19::chr11:73685823..73685840,+p3@CU680035
Hg19::chr12:6929602..6929617,+p@chr12:6929602..6929617
+
Hg19::chr12:7651740..7651752,-p@chr12:7651740..7651752
-
Hg19::chr12:7653778..7653791,-p@chr12:7653778..7653791
-
Hg19::chr13:103052822..103052832,+p@chr13:103052822..103052832
+
Hg19::chr13:111115632..111115634,-p1@COL4A2-AS2
Hg19::chr14:21269756..21269773,-p10@RNASE1
Hg19::chr14:21269929..21269939,-p11@RNASE1
Hg19::chr14:21270019..21270028,-p12@RNASE1
Hg19::chr14:74946794..74946851,-p1@MIR4709
Hg19::chr14:93176153..93176178,-p@chr14:93176153..93176178
-
Hg19::chr14:93179177..93179188,-p6@LGMN
Hg19::chr14:93182505..93182508,-p@chr14:93182505..93182508
-
Hg19::chr14:93214962..93214979,-p1@LGMN
Hg19::chr15:79217748..79217762,-p@chr15:79217748..79217762
-
Hg19::chr15:79229733..79229748,-p4@CTSH
Hg19::chr17:37949522..37949523,+p@chr17:37949522..37949523
+
Hg19::chr17:42429816..42429828,+p@chr17:42429816..42429828
+
Hg19::chr17:42429879..42429924,-p1@BC127696
Hg19::chr17:42430024..42430037,+p@chr17:42430024..42430037
+
Hg19::chr17:42430205..42430221,+p@chr17:42430205..42430221
+
Hg19::chr17:7483746..7483753,+p@chr17:7483746..7483753
+
Hg19::chr17:7484033..7484055,+p@chr17:7484033..7484055
+
Hg19::chr17:7484875..7484887,+p@chr17:7484875..7484887
+
Hg19::chr19:11687914..11687926,-p10@ACP5
Hg19::chr19:18288003..18288038,+p@chr19:18288003..18288038
+
Hg19::chr19:18288064..18288080,+p@chr19:18288064..18288080
+
Hg19::chr19:18288514..18288554,+p6@IFI30
Hg19::chr19:18288780..18288808,+p4@IFI30
Hg19::chr19:35773242..35773257,+p3@HAMP
Hg19::chr19:35773262..35773314,+p2@HAMP
Hg19::chr19:40873627..40873641,+p@chr19:40873627..40873641
+
Hg19::chr19:40877583..40877609,+p7@PLD3
Hg19::chr19:4357364..4357367,+p@chr19:4357364..4357367
+
Hg19::chr19:45422516..45422534,+p@chr19:45422516..45422534
+
Hg19::chr19:49469610..49469651,+p@chr19:49469610..49469651
+
Hg19::chr19:49469870..49469884,+p@chr19:49469870..49469884
+
Hg19::chr19:49469894..49469928,+p@chr19:49469894..49469928
+
Hg19::chr19:52327915..52327926,+p@chr19:52327915..52327926
+
Hg19::chr1:110473205..110473218,+p@chr1:110473205..110473218
+
Hg19::chr1:160535230..160535238,-p@chr1:160535230..160535238
-
Hg19::chr1:161188661..161188679,+p@chr1:161188661..161188679
+
Hg19::chr1:201272002..201272005,-p@chr1:201272002..201272005
-
Hg19::chr1:24172598..24172603,-p@chr1:24172598..24172603
-
Hg19::chr1:24181014..24181027,-p@chr1:24181014..24181027
-
Hg19::chr1:24192072..24192082,-p@chr1:24192072..24192082
-
Hg19::chr1:6161022..6161037,+p@chr1:6161022..6161037
+
Hg19::chr20:35488267..35488271,+p@chr20:35488267..35488271
+
Hg19::chr20:4004776..4004790,+p2@FTLP3
Hg19::chr20:44637507..44637523,+p2@MMP9
Hg19::chr20:44638500..44638512,+p@chr20:44638500..44638512
+
Hg19::chr20:44638515..44638530,+p@chr20:44638515..44638530
+
Hg19::chr20:44638551..44638562,+p@chr20:44638551..44638562
+
Hg19::chr20:44638566..44638579,+p@chr20:44638566..44638579
+
Hg19::chr20:44638613..44638632,+p@chr20:44638613..44638632
+
Hg19::chr20:44638657..44638691,+p@chr20:44638657..44638691
+
Hg19::chr20:44638694..44638710,+p@chr20:44638694..44638710
+
Hg19::chr20:44638717..44638738,-p@chr20:44638717..44638738
-
Hg19::chr20:44639118..44639130,+p@chr20:44639118..44639130
+
Hg19::chr20:44639141..44639152,-p@chr20:44639141..44639152
-
Hg19::chr20:44639149..44639161,+p@chr20:44639149..44639161
+
Hg19::chr20:44639171..44639178,+p@chr20:44639171..44639178
+
Hg19::chr20:44639194..44639223,+p@chr20:44639194..44639223
+
Hg19::chr20:44639584..44639604,+p@chr20:44639584..44639604
+
Hg19::chr20:44639616..44639619,+p@chr20:44639616..44639619
+
Hg19::chr20:44639634..44639645,+p@chr20:44639634..44639645
+
Hg19::chr20:44639771..44639782,+p@chr20:44639771..44639782
+
Hg19::chr20:44639805..44639831,+p@chr20:44639805..44639831
+
Hg19::chr20:44639836..44639854,+p@chr20:44639836..44639854
+
Hg19::chr20:44639864..44639892,+p@chr20:44639864..44639892
+
Hg19::chr20:44639896..44639903,+p@chr20:44639896..44639903
+
Hg19::chr20:44639906..44639917,+p@chr20:44639906..44639917
+
Hg19::chr20:44639910..44639947,-p@chr20:44639910..44639947
-
Hg19::chr20:44639929..44639935,+p@chr20:44639929..44639935
+
Hg19::chr20:44640241..44640245,-p@chr20:44640241..44640245
-
Hg19::chr20:44640269..44640283,+p7@MMP9
Hg19::chr20:44640304..44640310,+p13@MMP9
Hg19::chr20:44640312..44640322,+p10@MMP9
Hg19::chr20:44640347..44640359,+p11@MMP9
Hg19::chr20:44640803..44640826,+p3@MMP9
Hg19::chr20:44640829..44640856,+p4@MMP9
Hg19::chr20:44640873..44640902,+p@chr20:44640873..44640902
+
Hg19::chr20:44641061..44641077,+p@chr20:44641061..44641077
+
Hg19::chr20:44641085..44641097,+p@chr20:44641085..44641097
+
Hg19::chr20:44641109..44641122,+p@chr20:44641109..44641122
+
Hg19::chr20:44641138..44641146,+p@chr20:44641138..44641146
+
Hg19::chr20:44641166..44641180,+p@chr20:44641166..44641180
+
Hg19::chr20:44641953..44641968,+p@chr20:44641953..44641968
+
Hg19::chr20:44642333..44642369,+p@chr20:44642333..44642369
+
Hg19::chr20:57570289..57570299,-p@chr20:57570289..57570299
-
Hg19::chr20:57570804..57570821,-p@chr20:57570804..57570821
-
Hg19::chr20:57571726..57571740,-p@chr20:57571726..57571740
-
Hg19::chr20:57571742..57571753,-p@chr20:57571742..57571753
-
Hg19::chr20:57571798..57571819,-p@chr20:57571798..57571819
-
Hg19::chr20:57571822..57571834,-p@chr20:57571822..57571834
-
Hg19::chr20:57572713..57572734,-p4@CTSZ
Hg19::chr20:57576512..57576549,+p@chr20:57576512..57576549
+
Hg19::chr20:57576573..57576591,-p@chr20:57576573..57576591
-
Hg19::chr20:57576595..57576610,-p@chr20:57576595..57576610
-
Hg19::chr20:57576634..57576649,-p@chr20:57576634..57576649
-
Hg19::chr20:57576662..57576680,+p@chr20:57576662..57576680
+
Hg19::chr20:57576663..57576679,-p@chr20:57576663..57576679
-
Hg19::chr20:57581400..57581407,-p7@CTSZ
Hg19::chr20:57581464..57581474,-p8@CTSZ
Hg19::chr20:57581518..57581550,-p3@CTSZ
Hg19::chr21:45194559..45194611,-p@chr21:45194559..45194611
-
Hg19::chr22:17661395..17661415,-p@chr22:17661395..17661415
-
Hg19::chr2:120125783..120125803,+p2@DBI
Hg19::chr2:85628691..85628713,-p9@CAPG
Hg19::chr2:85628754..85628782,-p8@CAPG
Hg19::chr3:158546800..158546806,+p@chr3:158546800..158546806
+
Hg19::chr3:9758708..9758722,+p@chr3:9758708..9758722
+
Hg19::chr4:26433638..26433663,+p@chr4:26433638..26433663
+
Hg19::chr5:150639431..150639450,+p8@GM2A
Hg19::chr5:150646304..150646337,+p@chr5:150646304..150646337
+
Hg19::chr5:150646409..150646437,+p@chr5:150646409..150646437
+
Hg19::chr5:150646897..150646939,+p@chr5:150646897..150646939
+
Hg19::chr5:150646966..150646980,+p@chr5:150646966..150646980
+
Hg19::chr5:150647000..150647027,+p@chr5:150647000..150647027
+
Hg19::chr5:150647079..150647092,+p@chr5:150647079..150647092
+
Hg19::chr5:150647096..150647119,+p@chr5:150647096..150647119
+
Hg19::chr5:150647233..150647242,+p@chr5:150647233..150647242
+
Hg19::chr5:150647245..150647268,+p@chr5:150647245..150647268
+
Hg19::chr5:150647383..150647397,+p@chr5:150647383..150647397
+
Hg19::chr5:150647424..150647447,+p@chr5:150647424..150647447
+
Hg19::chr5:150647455..150647492,+p@chr5:150647455..150647492
+
Hg19::chr5:150647578..150647589,+p@chr5:150647578..150647589
+
Hg19::chr5:150647622..150647708,+p@chr5:150647622..150647708
+
Hg19::chr5:150648469..150648481,+p15@GM2A
Hg19::chr6:134493391..134493422,-p29@SGK1
Hg19::chr6:137106709..137106722,+p@chr6:137106709..137106722
+
Hg19::chr6:41691289..41691312,-p9@TFEB
Hg19::chr6:46666704..46666713,-p@chr6:46666704..46666713
-
Hg19::chr6:46673031..46673038,-p@chr6:46673031..46673038
-
Hg19::chr6:46684758..46684771,-p@chr6:46684758..46684771
-
Hg19::chr7:128582226..128582238,+p7@IRF5
Hg19::chr7:23293783..23293819,+p@chr7:23293783..23293819
+
Hg19::chr7:23293830..23293872,+p@chr7:23293830..23293872
+
Hg19::chr7:23296511..23296525,+p@chr7:23296511..23296525
+
Hg19::chr7:23296584..23296598,+p@chr7:23296584..23296598
+
Hg19::chr7:23296612..23296636,+p@chr7:23296612..23296636
+
Hg19::chr7:23296645..23296661,+p@chr7:23296645..23296661
+
Hg19::chr7:23299616..23299627,+p@chr7:23299616..23299627
+
Hg19::chr7:23299631..23299647,+p@chr7:23299631..23299647
+
Hg19::chr7:23299660..23299676,+p@chr7:23299660..23299676
+
Hg19::chr7:23299706..23299719,+p@chr7:23299706..23299719
+
Hg19::chr7:23300071..23300080,+p@chr7:23300071..23300080
+
Hg19::chr7:23300125..23300137,+p@chr7:23300125..23300137
+
Hg19::chr7:23300220..23300250,+p@chr7:23300220..23300250
+
Hg19::chr7:23300331..23300358,+p@chr7:23300331..23300358
+
Hg19::chr7:23300355..23300393,-p@chr7:23300355..23300393
-
Hg19::chr7:23309611..23309632,+p6@GPNMB
Hg19::chr7:23309707..23309722,+p4@GPNMB
Hg19::chr7:23309737..23309748,+p10@GPNMB
Hg19::chr7:23313917..23313928,+p@chr7:23313917..23313928
+
Hg19::chr7:23313997..23314023,+p@chr7:23313997..23314023
+
Hg19::chr7:99798099..99798128,+p7@STAG3
Hg19::chr8:11700029..11700043,+p@chr8:11700029..11700043
+
Hg19::chr8:11700092..11700121,-p@chr8:11700092..11700121
-
Hg19::chr8:11701862..11701910,-p4@AK098296
Hg19::chr8:11701938..11701982,-p2@AK098296
Hg19::chr8:11702014..11702044,-p3@AK098296
Hg19::chr8:11702074..11702085,-p7@AK098296
Hg19::chr8:11702131..11702148,-p5@AK098296
Hg19::chr8:11702188..11702212,+p@chr8:11702188..11702212
+
Hg19::chr8:11702232..11702287,-p1@AK098296
Hg19::chr8:11702293..11702328,+p@chr8:11702293..11702328
+
Hg19::chr8:11702374..11702395,-p@chr8:11702374..11702395
-
Hg19::chr8:11702400..11702427,-p@chr8:11702400..11702427
-
Hg19::chr8:11702431..11702466,-p@chr8:11702431..11702466
-
Hg19::chr8:11702470..11702503,-p@chr8:11702470..11702503
-
Hg19::chr8:11702539..11702605,-p@chr8:11702539..11702605
-
Hg19::chr8:11702613..11702650,-p@chr8:11702613..11702650
-
Hg19::chr8:11702661..11702681,-p@chr8:11702661..11702681
-
Hg19::chr8:11702710..11702739,-p@chr8:11702710..11702739
-
Hg19::chr8:11703197..11703242,-p@chr8:11703197..11703242
-
Hg19::chr8:11704585..11704608,-p2@AK128472
Hg19::chr8:11704618..11704686,-p1@AK128472
Hg19::chr8:11705244..11705269,-p6@CTSB
Hg19::chr8:11705305..11705335,-p5@CTSB
Hg19::chr8:11705641..11705670,-p4@CTSB
Hg19::chr8:11706585..11706619,-p2@CTSB
Hg19::chr8:11706630..11706647,-p9@CTSB
Hg19::chr8:11706648..11706676,-p7@CTSB
Hg19::chr8:11708428..11708450,-p@chr8:11708428..11708450
-
Hg19::chr8:11708451..11708497,-p@chr8:11708451..11708497
-
Hg19::chr8:11710154..11710178,-p@chr8:11710154..11710178
-
Hg19::chr8:11710182..11710212,-p@chr8:11710182..11710212
-
Hg19::chr8:11710979..11710993,-p11@CTSB
Hg19::chr8:16050288..16050299,-p4@MSR1
Hg19::chr9:97367777..97367783,-p@chr9:97367777..97367783
-
Hg19::chrX:30648756..30648775,+p2@FTLP2
Hg19::chrX:37672478..37672492,+p@chrX:37672478..37672492
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005764lysosome1.0480335735187e-12
GO:0000323lytic vacuole1.0480335735187e-12
GO:0005773vacuole2.55788396001967e-12
GO:0048770pigment granule2.00977059816662e-05
GO:0042470melanosome2.00977059816662e-05
GO:0004197cysteine-type endopeptidase activity0.000144102989006187
GO:0044444cytoplasmic part0.000543690591520644
GO:0004175endopeptidase activity0.000543690591520644
GO:0016787hydrolase activity0.000695068473515278
GO:0008234cysteine-type peptidase activity0.00148800656465349
GO:0043231intracellular membrane-bound organelle0.00148800656465349
GO:0043227membrane-bound organelle0.00148800656465349
GO:0006687glycosphingolipid metabolic process0.00203212951820557
GO:0016023cytoplasmic membrane-bound vesicle0.00203212951820557
GO:0031988membrane-bound vesicle0.00203212951820557
GO:0008233peptidase activity0.00302605906957373
GO:0006664glycolipid metabolic process0.00324472019915184
GO:0031410cytoplasmic vesicle0.00324472019915184
GO:0005737cytoplasm0.00324472019915184
GO:0031982vesicle0.00324472019915184
GO:0006508proteolysis0.00324472019915184
GO:0042007interleukin-18 binding0.00828775827557786
GO:0030290sphingolipid activator protein activity0.00828775827557786
GO:0032428beta-N-acetylgalactosaminidase activity0.00828775827557786
GO:0004213cathepsin B activity0.00828775827557786
GO:0004192cathepsin D activity0.00828775827557786
GO:0004215cathepsin H activity0.00828775827557786
GO:0004229gelatinase B activity0.00828775827557786
GO:0030984kininogen binding0.00828775827557786
GO:0006665sphingolipid metabolic process0.0115021181945284
GO:0043229intracellular organelle0.0123213930737607
GO:0043226organelle0.0123213930737607
GO:0004098cerebroside-sulfatase activity0.0123213930737607
GO:0005889hydrogen:potassium-exchanging ATPase complex0.0123213930737607
GO:0004557alpha-galactosidase activity0.0123213930737607
GO:0016004phospholipase activator activity0.0123213930737607
GO:0045179apical cortex0.0123213930737607
GO:0030156benzodiazepine receptor binding0.0123213930737607
GO:0009313oligosaccharide catabolic process0.0123213930737607
GO:0045177apical part of cell0.0137390754098811
GO:0005319lipid transporter activity0.0166542704452397
GO:0004336galactosylceramidase activity0.0171563837113442
GO:0004563beta-N-acetylhexosaminidase activity0.0218283282762773
GO:0006689ganglioside catabolic process0.0218283282762773
GO:0046479glycosphingolipid catabolic process0.0255355193792421
GO:0008133collagenase activity0.0255355193792421
GO:0004348glucosylceramidase activity0.0255355193792421
GO:0006869lipid transport0.0266617983691264
GO:0044424intracellular part0.0266617983691264
GO:0008081phosphoric diester hydrolase activity0.0266617983691264
GO:0007130synaptonemal complex assembly0.0266617983691264
GO:0004630phospholipase D activity0.0266617983691264
GO:0009898internal side of plasma membrane0.0266617983691264
GO:0001509legumain activity0.0266617983691264
GO:0016042lipid catabolic process0.0282327712385623
GO:0019377glycolipid catabolic process0.0294364417697988
GO:0007129synapsis0.0294364417697988
GO:0005102receptor binding0.0294364417697988
GO:0005615extracellular space0.0314492967441854
GO:0019915sequestering of lipid0.0314492967441854
GO:0001573ganglioside metabolic process0.0314492967441854
GO:0004767sphingomyelin phosphodiesterase activity0.0337110872120385
GO:0030547receptor inhibitor activity0.0337110872120385
GO:0048019receptor antagonist activity0.0337110872120385
GO:0042578phosphoric ester hydrolase activity0.0360876906578836
GO:0016788hydrolase activity, acting on ester bonds0.0371161970695443
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds0.0371161970695443
GO:0030545receptor regulator activity0.0371161970695443
GO:0003709RNA polymerase III transcription factor activity0.0371161970695443
GO:0030225macrophage differentiation0.0371161970695443
GO:0004565beta-galactosidase activity0.0371161970695443
GO:0042088T-helper 1 type immune response0.0383185081814939
GO:0017040ceramidase activity0.0383185081814939
GO:0015925galactosidase activity0.0383185081814939
GO:0050832defense response to fungus0.0383185081814939
GO:0000795synaptonemal complex0.0409522584277374
GO:0016798hydrolase activity, acting on glycosyl bonds0.0445242020859973
GO:0030149sphingolipid catabolic process0.0460112216962742



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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