Personal tools

DOID:1325: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:1325 |name=bronchus cancer |namespace= |def= |xref= |is_a=DOID:1324 |synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:1...")
 
No edit summary
Line 2: Line 2:
|id=DOID:1325
|id=DOID:1325
|name=bronchus cancer
|name=bronchus cancer
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=ICD9CM:162.9;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:190092003;;SNOMEDCT_2010_1_31:269465004;;UMLS_CUI:C0348343
|is_a=DOID:1324
|is_a=DOID:1324
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 13:59, 11 June 2012

Name:bronchus cancer
Namespace:disease_ontology
Xrefs:
links:

ICD9CM:162.9
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:190092003
SNOMEDCT_2010_1_31:269465004

UMLS_CUI:C0348343
Synonyms: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3904 (bronchogenic carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1325 (bronchus cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr2:202413051..202413061,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:202413051..202413061, -
1.78e-29FFCP PHASE1:Hg19::chrX:10852011..10852021,-#_1b95cd093abad85ff1daec551ffc50b7p27@MID1
1.78e-29FFCP PHASE1:Hg19::chr4:41750020..41750029,-#_1b95cd093abad85ff1daec551ffc50b7p9@PHOX2B
1.78e-29FFCP PHASE1:Hg19::chr10:129703392..129703416,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129703392..129703416, +
1.78e-29FFCP PHASE1:Hg19::chr3:95401928..95401936,-#_1b95cd093abad85ff1daec551ffc50b7p3@ENST00000494840, p3@uc003dro.1
1.78e-29FFCP PHASE1:Hg19::chr17:70940275..70940283,+#_1b95cd093abad85ff1daec551ffc50b7p@chr17:70940275..70940283, +
1.78e-29FFCP PHASE1:Hg19::chr12:84664662..84664670,+#_1b95cd093abad85ff1daec551ffc50b7p3@ENST00000547882
1.78e-29FFCP PHASE2:Hg19::chr20:45418126..45418131,-#_1b95cd093abad85ff1daec551ffc50b7p@chr20:45418126..45418131, -
1.78e-29FFCP PHASE2:Hg19::chr15:96959907..96959930,+#_1b95cd093abad85ff1daec551ffc50b7p@chr15:96959907..96959930, +
1.78e-29FFCP PHASE2:Hg19::chr8:82275651..82275662,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:82275651..82275662, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626550..97626562,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97626550..97626562, -
1.78e-29FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_1b95cd093abad85ff1daec551ffc50b7p@chr16:13010571..13010578, +
1.78e-29FFCP PHASE1:Hg19::chr7:95776285..95776292,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95776285..95776292, -
1.78e-29FFCP PHASE1:Hg19::chr19:46763326..46763349,+#_1b95cd093abad85ff1daec551ffc50b7p@chr19:46763326..46763349, +
1.78e-29FFCP PHASE2:Hg19::chr17:63528638..63528642,+#_1b95cd093abad85ff1daec551ffc50b7p@chr17:63528638..63528642, +
1.78e-29FFCP PHASE1:Hg19::chr9:17454052..17454060,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:17454052..17454060, +
1.78e-29FFCP PHASE1:Hg19::chr16:13010571..13010578,+#_1b95cd093abad85ff1daec551ffc50b7p@chr16:13010571..13010578, +
1.78e-29FFCP PHASE1:Hg19::chr6:141460346..141460355,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:141460346..141460355, +
1.78e-29FFCP PHASE2:Hg19::chr10:129703430..129703445,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129703430..129703445, +
1.78e-29FFCP PHASE1:Hg19::chr10:115999570..115999575,+#_1b95cd093abad85ff1daec551ffc50b7p9@VWA2
1.78e-29FFCP PHASE1:Hg19::chr3:86703154..86703166,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:86703154..86703166, -
1.78e-29FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_1b95cd093abad85ff1daec551ffc50b7p@chr17:63511856..63511858, -
1.78e-29FFCP PHASE1:Hg19::chr12:79756349..79756364,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:79756349..79756364, -
1.78e-29FFCP PHASE1:Hg19::chr8:98108435..98108438,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98108435..98108438, -
1.78e-29FFCP PHASE1:Hg19::chr1:81686906..81686911,+#_1b95cd093abad85ff1daec551ffc50b7p@chr1:81686906..81686911, +
1.78e-29FFCP PHASE1:Hg19::chr16:7354636..7354645,-#_1b95cd093abad85ff1daec551ffc50b7p@chr16:7354636..7354645, -
1.78e-29FFCP PHASE2:Hg19::chr8:72938203..72938230,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:72938203..72938230, +
1.78e-29FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:125547084..125547089, +
1.78e-29FFCP PHASE2:Hg19::chr2:97625602..97625628,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97625602..97625628, -
1.78e-29FFCP PHASE2:Hg19::chr2:222160774..222160804,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222160774..222160804, +
1.78e-29FFCP PHASE2:Hg19::chr19:54024499..54024503,+#_1b95cd093abad85ff1daec551ffc50b7p48@ZNF331
1.78e-29FFCP PHASE1:Hg19::chr10:36850273..36850276,-#_1b95cd093abad85ff1daec551ffc50b7p@chr10:36850273..36850276, -
1.78e-29FFCP PHASE1:Hg19::chr4:139019174..139019198,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:139019174..139019198, -
1.78e-29FFCP PHASE1:Hg19::chr14:57127856..57127863,+#_1b95cd093abad85ff1daec551ffc50b7p@chr14:57127856..57127863, +
1.78e-29FFCP PHASE2:Hg19::chr2:138685510..138685520,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:138685510..138685520, -
1.78e-29FFCP PHASE1:Hg19::chr2:8803669..8803680,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:8803669..8803680, -
1.78e-29FFCP PHASE1:Hg19::chr1:199134722..199134729,+#_1b95cd093abad85ff1daec551ffc50b7p@chr1:199134722..199134729, +
1.78e-29FFCP PHASE2:Hg19::chr8:98070371..98070384,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98070371..98070384, -
1.78e-29FFCP PHASE2:Hg19::chr6:154858754..154858762,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:154858754..154858762, +
1.78e-29FFCP PHASE2:Hg19::chr5:28571958..28571968,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:28571958..28571968, -
1.78e-29FFCP PHASE2:Hg19::chr16:66088105..66088108,-#_1b95cd093abad85ff1daec551ffc50b7p@chr16:66088105..66088108, -
1.78e-29FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_1b95cd093abad85ff1daec551ffc50b7p1@ENST00000418699, p1@ENST00000432330
1.78e-29FFCP PHASE1:Hg19::chr14:60958049..60958051,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:60958049..60958051, -
1.78e-29FFCP PHASE2:Hg19::chr2:192805239..192805246,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:192805239..192805246, +
1.78e-29FFCP PHASE1:Hg19::chr13:95133382..95133389,-#_1b95cd093abad85ff1daec551ffc50b7p@chr13:95133382..95133389, -
1.78e-29FFCP PHASE2:Hg19::chr8:39970826..39970832,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:39970826..39970832, +
1.78e-29FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_1b95cd093abad85ff1daec551ffc50b7p@chr15:71685918..71685922, -
1.78e-29FFCP PHASE1:Hg19::chr8:98065877..98065881,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98065877..98065881, -
1.78e-29FFCP PHASE1:Hg19::chr11:42142040..42142055,+#_1b95cd093abad85ff1daec551ffc50b7p@chr11:42142040..42142055, +
1.78e-29FFCP PHASE2:Hg19::chr8:57525935..57525942,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:57525935..57525942, +
1.78e-29FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:26155734..26155742, +
1.78e-29FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:84651827..84651832, -
1.78e-29FFCP PHASE1:Hg19::chr7:120383546..120383560,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:120383546..120383560, +
1.78e-29FFCP PHASE1:Hg19::chr4:107955476..107955508,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:107955476..107955508, -
1.78e-29FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:26590563..26590574, -
1.78e-29FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:135119636..135119642, +
1.78e-29FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97972117..97972120, -
1.78e-29FFCP PHASE1:Hg19::chr8:116215335..116215378,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:116215335..116215378, +
1.78e-29FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222160741..222160750, +
1.78e-29FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_1b95cd093abad85ff1daec551ffc50b7p@chr18:10085817..10085825, +
1.78e-29FFCP PHASE1:Hg19::chr14:60194070..60194083,-#_1b95cd093abad85ff1daec551ffc50b7p25@RTN1
1.78e-29FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:79840323..79840338, +
1.78e-29FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:111234799..111234807, -
1.78e-29FFCP PHASE1:Hg19::chr13:76563913..76563916,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:76563913..76563916, +
1.78e-29FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_1b95cd093abad85ff1daec551ffc50b7p4@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:39018314..39018323, +
1.78e-29FFCP PHASE1:Hg19::chr4:185426203..185426209,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:185426203..185426209, -
1.78e-29FFCP PHASE1:Hg19::chr8:97964849..97964868,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97964849..97964868, -
1.78e-29FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:20538015..20538023, -
1.78e-29FFCP PHASE1:Hg19::chr3:102635473..102635480,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:102635473..102635480, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:1325&oldid=1832177"