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(Created page with "{{DOID |id=DOID:2394 |name=ovarian cancer |namespace= |def= |xref= |is_a=DOID:120 |synonym="malignant Ovarian tumor" EXACT [NCI2004_11_17:C7431];;"malignant tumor of ov...")
 
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|id=DOID:2394
|id=DOID:2394
|name=ovarian cancer
|name=ovarian cancer
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D010051;;NCI:C4984;;OMIM:167000;;SNOMEDCT_2010_1_31:123843001;;SNOMEDCT_2010_1_31:154528000;;SNOMEDCT_2010_1_31:363443007;;SNOMEDCT_2010_1_31:372117006;;SNOMEDCT_2010_1_31:93934004;;UMLS_CUI:C0919267;;UMLS_CUI:C1140680;;UMLS_CUI:C1299247
|is_a=DOID:120
|is_a=DOID:120
|synonym="malignant Ovarian tumor" EXACT [NCI2004_11_17:C7431];;"malignant tumor of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:363443007];;"malignant tumour of ovary" EXACT [SNOMEDCT_2005_07_31:154528000];;"neoplasm of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:123843001];;"ovarian cancer" EXACT [CSP2005:2016-1387];;"ovarian neoplasm" EXACT [MTH:NOCODE];;"ovary cancer" EXACT [];;"ovary neoplasm" EXACT [CSP2005:2016-1387];;"primary malignant neoplasm of ovary and other uterine adnexa (disorder)" EXACT [SNOMEDCT_2005_07_31:372117006];;"primary ovarian cancer" EXACT [];;"tumor of the Ovary" EXACT [NCI2004_11_17:C4984]
|synonym="malignant Ovarian tumor" EXACT [NCI2004_11_17:C7431];;"malignant tumor of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:363443007];;"malignant tumour of ovary" EXACT [SNOMEDCT_2005_07_31:154528000];;"neoplasm of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:123843001];;"ovarian cancer" EXACT [CSP2005:2016-1387];;"ovarian neoplasm" EXACT [MTH:NOCODE];;"ovary cancer" EXACT [];;"ovary neoplasm" EXACT [CSP2005:2016-1387];;"primary malignant neoplasm of ovary and other uterine adnexa (disorder)" EXACT [SNOMEDCT_2005_07_31:372117006];;"primary ovarian cancer" EXACT [];;"tumor of the Ovary" EXACT [NCI2004_11_17:C4984]
|comment=
|comment=OMIM mapping confirmed by DO. [SN].
|alt_id=DOID:0060070;;DOID:2144;;DOID:9595
|alt_id=DOID:0060070;;DOID:2144;;DOID:9595
|disjoint_from=
|disjoint_from=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 13:59, 11 June 2012

Name:ovarian cancer
Namespace:disease_ontology
Xrefs:
links:

MSH:D010051
NCI:C4984
OMIM:167000
SNOMEDCT_2010_1_31:123843001
SNOMEDCT_2010_1_31:154528000
SNOMEDCT_2010_1_31:363443007
SNOMEDCT_2010_1_31:372117006
SNOMEDCT_2010_1_31:93934004
UMLS_CUI:C0919267
UMLS_CUI:C1140680

UMLS_CUI:C1299247
Synonyms: "malignant Ovarian tumor" EXACT [NCI2004_11_17:C7431]
"malignant tumor of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:363443007]
"malignant tumour of ovary" EXACT [SNOMEDCT_2005_07_31:154528000]
"neoplasm of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:123843001]
"ovarian cancer" EXACT [CSP2005:2016-1387]
"ovarian neoplasm" EXACT [MTH:NOCODE]
"ovary cancer" EXACT []
"ovary neoplasm" EXACT [CSP2005:2016-1387]
"primary malignant neoplasm of ovary and other uterine adnexa (disorder)" EXACT [SNOMEDCT_2005_07_31:372117006]
"primary ovarian cancer" EXACT []
"tumor of the Ovary" EXACT [NCI2004_11_17:C4984]
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:0060070
DOID:2144
DOID:9595

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:120(female reproductive organ cancer)



Children


is a:DOID:2152 (ovary epithelial cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10687-109F3 (Krukenberg tumor cell line:HSKTC)
  • 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
  • 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
  • 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
  • 11758-123H3 (mesenchymal precursor cell - ovarian cancer metastasis, donor1)
  • 11759-123H4 (mesenchymal precursor cell - ovarian cancer right ovary, donor2)
  • 11760-123H5 (mesenchymal precursor cell - ovarian cancer left ovary, donor3)
  • 11761-123H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02))
  • 11762-123H7 (mesenchymal precursor cell - ovarian cancer metastasis, donor3)
  • 11833-124G6 (mesenchymal precursor cell - ovarian cancer left ovary, donor2)

... further results Mouse (Mus musculus)

  • 10687-109F3 (Krukenberg tumor cell line:HSKTC)
  • 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
  • 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
  • 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
  • 11758-123H3 (mesenchymal precursor cell - ovarian cancer metastasis, donor1)
  • 11759-123H4 (mesenchymal precursor cell - ovarian cancer right ovary, donor2)
  • 11760-123H5 (mesenchymal precursor cell - ovarian cancer left ovary, donor3)
  • 11761-123H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02))
  • 11762-123H7 (mesenchymal precursor cell - ovarian cancer metastasis, donor3)
  • 11833-124G6 (mesenchymal precursor cell - ovarian cancer left ovary, donor2)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2394 (ovarian cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.52e-73FFCP PHASE2:Hg19::chr4:90332316..90332323,+#_ea617e7414713166ba7b81c8766edf70p@chr4:90332316..90332323, +
3.52e-73FFCP PHASE1:Hg19::chr4:90332316..90332323,+#_ea617e7414713166ba7b81c8766edf70p@chr4:90332316..90332323, +
9.75e-71FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_e0409eb9ad6f90bc85859f45bb9a93ecp@chr5:81654563..81654582, +
9.75e-71FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_e0409eb9ad6f90bc85859f45bb9a93ecp@chr5:81654563..81654582, +
4.2e-67FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_b7d17b9c03322d3c34c66a6c0dcad772p@chr16:88278862..88278869, -
4.2e-67FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_b7d17b9c03322d3c34c66a6c0dcad772p@chr16:88278862..88278869, -
4.43e-65FFCP PHASE2:Hg19::chr5:136482422..136482426,+#_76f19b63ef567541228623da042b6e14p@chr5:136482422..136482426, +
4.43e-65FFCP PHASE1:Hg19::chr5:136482422..136482426,+#_76f19b63ef567541228623da042b6e14p@chr5:136482422..136482426, +
1.95e-62FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_2222f6cb274000c710ccb8315242bbbfp3@ENST00000437157
1.95e-62FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_2222f6cb274000c710ccb8315242bbbfp3@ENST00000437157
9.13e-57FFCP PHASE2:Hg19::chr18:25694851..25694855,-#_86d61512d8f4157f84c9614dd5965e26p@chr18:25694851..25694855, -
9.13e-57FFCP PHASE1:Hg19::chr18:25694851..25694855,-#_86d61512d8f4157f84c9614dd5965e26p@chr18:25694851..25694855, -
3.62e-56FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_836355b6bdb015d09a40da32c8439a56p@chr5:81654586..81654599, +
3.62e-56FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_836355b6bdb015d09a40da32c8439a56p@chr5:81654586..81654599, +
4.53e-56FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_17d580235b9e3a624264883929dea82fp@chr9:6257179..6257191, +
4.53e-56FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_17d580235b9e3a624264883929dea82fp@chr9:6257179..6257191, +
3.14e-52FFCP PHASE2:Hg19::chr4:167068286..167068320,+#_86aab51aece1db04b1c963be3e8906c9p@chr4:167068286..167068320, +
3.14e-52FFCP PHASE1:Hg19::chr4:167068286..167068320,+#_86aab51aece1db04b1c963be3e8906c9p@chr4:167068286..167068320, +
2.29e-50FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_a4b150b04d69619fb760c08c4bf42beap@chr4:38143865..38143904, -
2.29e-50FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_a4b150b04d69619fb760c08c4bf42beap@chr4:38143865..38143904, -
9.5e-49FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_5b687060e35de8ca669a78c3684d467bp@chr6:14671928..14671958, +
9.5e-49FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_5b687060e35de8ca669a78c3684d467bp@chr6:14671928..14671958, +
3.05e-47FFCP PHASE2:Hg19::chr5:64469134..64469150,-#_16c621771c2121d4beaaeda4fe6c91dap@chr5:64469134..64469150, -
3.05e-47FFCP PHASE1:Hg19::chr5:64469134..64469150,-#_16c621771c2121d4beaaeda4fe6c91dap@chr5:64469134..64469150, -
2.45e-43FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_b23973f2f8d7f33fc8c93b7050b85865p@chr18:53169326..53169330, -
2.45e-43FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_b23973f2f8d7f33fc8c93b7050b85865p@chr18:53169326..53169330, -
3.69e-42FFCP PHASE2:Hg19::chr9:83566735..83566738,+#_c4c2217783f1a3d095242a87cad9f9e9p@chr9:83566735..83566738, +
3.69e-42FFCP PHASE1:Hg19::chr9:83566735..83566738,+#_c4c2217783f1a3d095242a87cad9f9e9p@chr9:83566735..83566738, +
4.36e-42FFCP PHASE2:Hg19::chr3:45152138..45152151,-#_a0a400431fbfbb6f7fc3fe4426abf40dp5@CDCP1
4.36e-42FFCP PHASE1:Hg19::chr3:45152138..45152151,-#_a0a400431fbfbb6f7fc3fe4426abf40dp5@CDCP1
5.67e-42FFCP PHASE2:Hg19::chr13:38083855..38083873,+#_262fb55936812954043e5913710cdb23p@chr13:38083855..38083873, +
5.67e-42FFCP PHASE1:Hg19::chr13:38083855..38083873,+#_262fb55936812954043e5913710cdb23p@chr13:38083855..38083873, +
3.48e-41FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_e45e6ebb8734b9030d1fafb1d9a884dep6@IQCG
3.48e-41FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_e45e6ebb8734b9030d1fafb1d9a884dep6@IQCG
5.35e-40FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_fce9b77c8d97466219d56490a82577e4p@chr9:118435168..118435186, +
5.35e-40FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_fce9b77c8d97466219d56490a82577e4p@chr9:118435168..118435186, +
7.73e-40FFCP PHASE2:Hg19::chr10:4284210..4284228,+#_cdc3888386343c2919d50d2f4380a1c4p@chr10:4284210..4284228, +
7.73e-40FFCP PHASE1:Hg19::chr10:4284210..4284228,+#_cdc3888386343c2919d50d2f4380a1c4p@chr10:4284210..4284228, +
1.51e-39FFCP PHASE1:Hg19::chr9:5621474..5621483,-#_3b0d632c762a085230658109ed4aa179p@chr9:5621474..5621483, -
1.51e-39FFCP PHASE2:Hg19::chr9:5621474..5621483,-#_3b0d632c762a085230658109ed4aa179p@chr9:5621474..5621483, -
2.67e-39FFCP PHASE2:Hg19::chr7:17409475..17409478,-#_e4db29e8f21b9c3f213718e6741b800ap@chr7:17409475..17409478, -
2.67e-39FFCP PHASE1:Hg19::chr7:17409475..17409478,-#_e4db29e8f21b9c3f213718e6741b800ap@chr7:17409475..17409478, -
6.08e-39FFCP PHASE1:Hg19::chr9:6257148..6257157,+#_ccd899019c9af29d80094f39310ba164p@chr9:6257148..6257157, +
6.08e-39FFCP PHASE2:Hg19::chr9:6257148..6257157,+#_ccd899019c9af29d80094f39310ba164p@chr9:6257148..6257157, +
7.14e-39FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_b3354ffd7c565bd830431d55fecc8b47p4@STAR
7.14e-39FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_b3354ffd7c565bd830431d55fecc8b47p4@STAR
3.72e-38FFCP PHASE1:Hg19::chr1:98206661..98206672,-#_e87e96e06f4847b87e4f1dadcdaca61dp@chr1:98206661..98206672, -
3.72e-38FFCP PHASE2:Hg19::chr1:98206661..98206672,-#_e87e96e06f4847b87e4f1dadcdaca61dp@chr1:98206661..98206672, -
7.05e-38FFCP PHASE2:Hg19::chr2:162927693..162927706,-#_e5eba50500fcb8ce6cae565aacca373fp@chr2:162927693..162927706, -
7.05e-38FFCP PHASE1:Hg19::chr2:162927693..162927706,-#_e5eba50500fcb8ce6cae565aacca373fp@chr2:162927693..162927706, -
7.57e-38FFCP PHASE1:Hg19::chr3:101909187..101909198,+#_f25f2c25e0d5ddba7decad3a6e8b004ap@chr3:101909187..101909198, +
7.57e-38FFCP PHASE2:Hg19::chr3:101909187..101909198,+#_f25f2c25e0d5ddba7decad3a6e8b004ap@chr3:101909187..101909198, +
1.11e-37FFCP PHASE2:Hg19::chr2:162931138..162931149,-#_15198aedddc12abb7ae34652c483797dp14@DPP4
1.11e-37FFCP PHASE1:Hg19::chr2:162931138..162931149,-#_15198aedddc12abb7ae34652c483797dp14@DPP4
1.32e-37FFCP PHASE1:Hg19::chr2:1048832..1048860,+#_bc33684bd920f41476dc2b059ce6e57dp@chr2:1048832..1048860, +
1.32e-37FFCP PHASE2:Hg19::chr2:1048832..1048860,+#_bc33684bd920f41476dc2b059ce6e57dp@chr2:1048832..1048860, +
7.71e-36FFCP PHASE2:Hg19::chr13:44794616..44794621,+#_39781e4896cf792b8027143bb7ee96aap@chr13:44794616..44794621, +
7.71e-36FFCP PHASE1:Hg19::chr13:44794616..44794621,+#_39781e4896cf792b8027143bb7ee96aap@chr13:44794616..44794621, +
1.68e-35FFCP PHASE1:Hg19::chr9:93271212..93271237,-#_e79c76c25dcec0bee611fd954e00503ep@chr9:93271212..93271237, -
1.68e-35FFCP PHASE2:Hg19::chr9:93271212..93271237,-#_e79c76c25dcec0bee611fd954e00503ep@chr9:93271212..93271237, -
1.94e-35FFCP PHASE2:Hg19::chr11:9588526..9588534,+#_0bd81c32bf3c8ac6da761e6f286e73a0p@chr11:9588526..9588534, +
1.94e-35FFCP PHASE1:Hg19::chr11:9588526..9588534,+#_0bd81c32bf3c8ac6da761e6f286e73a0p@chr11:9588526..9588534, +
2.42e-35FFCP PHASE2:Hg19::chr4:118247051..118247056,+#_9e9998be528edc459153a8605882e281p@chr4:118247051..118247056, +
2.42e-35FFCP PHASE1:Hg19::chr4:118247051..118247056,+#_9e9998be528edc459153a8605882e281p@chr4:118247051..118247056, +
2.89e-35FFCP PHASE1:Hg19::chr9:6257212..6257223,+#_295040a24b50874f482e2cc95c0d7350p@chr9:6257212..6257223, +
2.89e-35FFCP PHASE2:Hg19::chr9:6257212..6257223,+#_295040a24b50874f482e2cc95c0d7350p@chr9:6257212..6257223, +
6.45e-34FFCP PHASE1:Hg19::chr2:40270530..40270541,+#_5783bf3a192ef72a875c8eb23bf05a46p@chr2:40270530..40270541, +
6.45e-34FFCP PHASE2:Hg19::chr2:40270530..40270541,+#_5783bf3a192ef72a875c8eb23bf05a46p@chr2:40270530..40270541, +
6.57e-34FFCP PHASE1:Hg19::chr2:67753505..67753511,-#_197c4eae1ec3965658f459e3668ec12cp@chr2:67753505..67753511, -
6.57e-34FFCP PHASE2:Hg19::chr2:67753505..67753511,-#_197c4eae1ec3965658f459e3668ec12cp@chr2:67753505..67753511, -
6.87e-34FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_776405a218c0711ea1281bf11de324a1p@chr9:6256728..6256739, +
6.87e-34FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_776405a218c0711ea1281bf11de324a1p@chr9:6256728..6256739, +
8.93e-34FFCP PHASE2:Hg19::chr9:133736506..133736518,+#_b9ac2a331da5d93d730341597466b549p@chr9:133736506..133736518, +
8.93e-34FFCP PHASE1:Hg19::chr9:133736506..133736518,+#_b9ac2a331da5d93d730341597466b549p@chr9:133736506..133736518, +
1.81e-33FFCP PHASE1:Hg19::chr9:6237073..6237087,+#_d6eb61705452b06992019dc0ba7ad6f8p@chr9:6237073..6237087, +
1.81e-33FFCP PHASE2:Hg19::chr9:6237073..6237087,+#_d6eb61705452b06992019dc0ba7ad6f8p@chr9:6237073..6237087, +
4.6e-33FFCP PHASE2:Hg19::chr1:209859518..209859540,+#_861810172a277cb74e93de9a989bddf8p4@HSD11B1
4.6e-33FFCP PHASE1:Hg19::chr1:209859518..209859540,+#_861810172a277cb74e93de9a989bddf8p4@HSD11B1
8.19e-33FFCP PHASE2:Hg19::chr1:222079924..222079927,-#_75128138820da1a901f4348977f6e94ep@chr1:222079924..222079927, -
8.19e-33FFCP PHASE1:Hg19::chr1:222079924..222079927,-#_75128138820da1a901f4348977f6e94ep@chr1:222079924..222079927, -
1.13e-32FFCP PHASE1:Hg19::chr10:74096608..74096630,-#_09d795fd945d7f18678af75d53f8e96cp8@DNAJB12
1.13e-32FFCP PHASE2:Hg19::chr10:74096608..74096630,-#_09d795fd945d7f18678af75d53f8e96cp8@DNAJB12
3.22e-32FFCP PHASE2:Hg19::chr2:46562120..46562166,+#_57d3a2f475007d09173378a7fcbee82dp@chr2:46562120..46562166, +
3.22e-32FFCP PHASE1:Hg19::chr2:46562120..46562166,+#_57d3a2f475007d09173378a7fcbee82dp@chr2:46562120..46562166, +
6.53e-32FFCP PHASE1:Hg19::chr9:6256995..6256999,+#_bd4f95fc0fc6042c7aa8ef1ad0caadfap@chr9:6256995..6256999, +
6.53e-32FFCP PHASE2:Hg19::chr9:6256995..6256999,+#_bd4f95fc0fc6042c7aa8ef1ad0caadfap@chr9:6256995..6256999, +
6.57e-32FFCP PHASE1:Hg19::chr14:62024238..62024249,+#_8a6a98a02f30b64c66054873b8e90890p@chr14:62024238..62024249, +
6.57e-32FFCP PHASE2:Hg19::chr14:62024238..62024249,+#_8a6a98a02f30b64c66054873b8e90890p@chr14:62024238..62024249, +
9.6e-32FFCP PHASE2:Hg19::chr7:22637806..22637822,+#_3f39bb71ade25138e304a23844eaab45p@chr7:22637806..22637822, +
9.6e-32FFCP PHASE1:Hg19::chr7:22637806..22637822,+#_3f39bb71ade25138e304a23844eaab45p@chr7:22637806..22637822, +
3.01e-31FFCP PHASE2:Hg19::chr2:162931058..162931063,-#_71916a6915c785ca0a925997212adf49p16@DPP4
3.01e-31FFCP PHASE1:Hg19::chr2:162931058..162931063,-#_71916a6915c785ca0a925997212adf49p16@DPP4
3.34e-31FFCP PHASE2:Hg19::chr6:83073074..83073093,+#_1720680374fee72e13bd2664b91b7f5ep15@TPBG
3.34e-31FFCP PHASE1:Hg19::chr6:83073074..83073093,+#_1720680374fee72e13bd2664b91b7f5ep15@TPBG
1.24e-30FFCP PHASE1:Hg19::chr20:4071339..4071342,-#_5ad9452bf98179273b4c5a947646eef7p@chr20:4071339..4071342, -
1.24e-30FFCP PHASE2:Hg19::chr20:4071339..4071342,-#_5ad9452bf98179273b4c5a947646eef7p@chr20:4071339..4071342, -
2.15e-30FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_e0b17d88a45e5589bbf3fd3baa0f9932p1@NR5A1
2.15e-30FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_e0b17d88a45e5589bbf3fd3baa0f9932p1@NR5A1
3.83e-30FFCP PHASE1:Hg19::chr3:98518647..98518667,-#_cfe25684967d183a991195122e9b0ec9p@chr3:98518647..98518667, -
3.83e-30FFCP PHASE2:Hg19::chr3:98518647..98518667,-#_cfe25684967d183a991195122e9b0ec9p@chr3:98518647..98518667, -

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