Personal tools

DOID:65: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:65 |name=connective tissue disease |namespace= |def="A tissue disease that affects tissues such as skin, tendons, and cartilage." [url:http\://www.niams.ni...")
 
No edit summary
Line 2: Line 2:
|id=DOID:65
|id=DOID:65
|name=connective tissue disease
|name=connective tissue disease
|namespace=
|namespace=disease_ontology
|def="A tissue disease that affects tissues such as skin, tendons, and cartilage." [url:http\://www.niams.nih.gov/Health_Info/Scleroderma/default.asp]
|def="A tissue disease that affects tissues such as skin, tendons, and cartilage." [url:http\://www.niams.nih.gov/Health_Info/Scleroderma/default.asp]
|xref=
|xref=MSH:D003240;;NCI:C26729;;SNOMEDCT_2010_1_31:105969002;;SNOMEDCT_2010_1_31:201432001;;SNOMEDCT_2010_1_31:268048008;;SNOMEDCT_2010_1_31:268126004;;UMLS_CUI:C0009782
|is_a=DOID:17
|is_a=DOID:17
|synonym="Connective tissue dis." EXACT [SNOMEDCT_2005_07_31:268048008];;"Connective tissue disease" EXACT [SNOMEDCT_2005_07_31:201432001];;"Connective tissue disease" EXACT [MTH:NOCODE];;"connective tissue disorder" EXACT [CSP2005:0729-7208];;"Connective tissue disorder" EXACT [NCI2004_11_17:C26729];;"disorder of connective tissue (disorder)" EXACT [SNOMEDCT_2005_07_31:105969002];;"Other musculoskelet/connectiv" EXACT [SNOMEDCT_2005_07_31:268126004]
|synonym="Connective tissue dis." EXACT [SNOMEDCT_2005_07_31:268048008];;"Connective tissue disease" EXACT [MTH:NOCODE];;"Connective tissue disease" EXACT [SNOMEDCT_2005_07_31:201432001];;"Connective tissue disorder" EXACT [NCI2004_11_17:C26729];;"connective tissue disorder" EXACT [CSP2005:0729-7208];;"disorder of connective tissue (disorder)" EXACT [SNOMEDCT_2005_07_31:105969002];;"Other musculoskelet/connectiv" EXACT [SNOMEDCT_2005_07_31:268126004]
|comment=
|comment=
|alt_id=
|alt_id=
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:01, 11 June 2012

Name:connective tissue disease
Namespace:disease_ontology
Definition:"A tissue disease that affects tissues such as skin, tendons, and cartilage." [url:http\://www.niams.nih.gov/Health_Info/Scleroderma/default.asp]
Xrefs:
links:

MSH:D003240
NCI:C26729
SNOMEDCT_2010_1_31:105969002
SNOMEDCT_2010_1_31:201432001
SNOMEDCT_2010_1_31:268048008
SNOMEDCT_2010_1_31:268126004

UMLS_CUI:C0009782
Synonyms: "Connective tissue dis." EXACT [SNOMEDCT_2005_07_31:268048008]
"Connective tissue disease" EXACT [MTH:NOCODE]
"Connective tissue disease" EXACT [SNOMEDCT_2005_07_31:201432001]
"Connective tissue disorder" EXACT [NCI2004_11_17:C26729]
"connective tissue disorder" EXACT [CSP2005:0729-7208]
"disorder of connective tissue (disorder)" EXACT [SNOMEDCT_2005_07_31:105969002]
"Other musculoskelet/connectiv" EXACT [SNOMEDCT_2005_07_31:268126004]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:17(musculoskeletal system disease)



Children


is a:DOID:854 (collagen disease)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:65 (connective tissue disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results