UBERON:0001230: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001230
|name=glomerular capsule
|namespace=
|def="The Bowman's capsule is a cup-like sac at the beginning of the tubular component of a nephron in the...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of=UBERON:0001229 | |part_of=UBERON:0001229 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:11, 15 June 2012
| Name: | glomerular capsule | ||
|---|---|---|---|
| Definition: | "The Bowman's capsule is a cup-like sac at the beginning of the tubular component of a nephron in the mammalian kidney. A glomerulus is enclosed in the sac. Fluids from blood in the glomerulus are collected in the Bowman's capsule and further processed along the nephron to form urine. This process is known as ultrafiltration. [WP,unvetted]." [Wikipedia:Glomerular_capsule] | ||
| Xrefs: |
| ||
| Synonyms: |
"Bowman's capsule" EXACT [1] "Bowmans capsule" EXACT [KUPO:0001001] | ||
| Comments: | One fold of the S-shaped body gives rise to Bowman窶冱 capsule[GUDMAP] | ||
| Alt_id: | UBERON:FMA_15626-MA_0001660 | ||
| Subset: |
uberon_slim vertebrate_core |
200px-Gray1130.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0004199(S-shaped body) |
| part_of: | UBERON:0001229(renal corpuscle) |
Children
| part of: | UBERON:0005749 (glomerular tuft) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001230 (glomerular capsule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.87e-64 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_e7d0f9f44dcc2fdf1df564bf222dcd8c | p@chr2:120409486..120409492, + |
| 6.87e-64 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_e7d0f9f44dcc2fdf1df564bf222dcd8c | p@chr2:120409486..120409492, + |
| 9.62e-40 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_2180156f83f8bbe85e52b23168d8a57a | p1@ENST00000413103 |
| 9.62e-40 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_2180156f83f8bbe85e52b23168d8a57a | p1@ENST00000413103 |
| 1.16e-36 | FFCP PHASE1:Hg19::chr17:79426453..79426462,+#_297162f83033179a0e739ebd9f88c194 | p@chr17:79426453..79426462, + |
| 1.16e-36 | FFCP PHASE2:Hg19::chr17:79426453..79426462,+#_297162f83033179a0e739ebd9f88c194 | p@chr17:79426453..79426462, + |
| 1.31e-36 | FFCP PHASE2:Hg19::chr8:77557753..77557755,-#_16e6214c3e96bc75535950ec1a7413b8 | p@chr8:77557753..77557755, - |
| 1.31e-36 | FFCP PHASE1:Hg19::chr8:77557753..77557755,-#_16e6214c3e96bc75535950ec1a7413b8 | p@chr8:77557753..77557755, - |
| 5.58e-32 | FFCP PHASE2:Hg19::chr1:32042764..32042776,+#_5d174e8e6b4123743ae0d5911015f266 | p6@TINAGL1 |
| 5.58e-32 | FFCP PHASE1:Hg19::chr1:32042764..32042776,+#_5d174e8e6b4123743ae0d5911015f266 | p6@TINAGL1 |
| 1.53e-30 | FFCP PHASE2:Hg19::chr15:91416076..91416089,+#_91f541b3e622d9beb8a62150411ea178 | p9@FURIN |
| 1.53e-30 | FFCP PHASE1:Hg19::chr15:91416076..91416089,+#_91f541b3e622d9beb8a62150411ea178 | p9@FURIN |
| 3.83e-30 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_41ac9cf2c60c907d7ebff05093897062 | p7@LRRN4 |
| 3.83e-30 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_41ac9cf2c60c907d7ebff05093897062 | p7@LRRN4 |
| 1.78e-29 | FFCP PHASE1:Hg19::chr2:26700331..26700340,-#_491ab00c6c920f6a20abd63c05951e9c | p@chr2:26700331..26700340, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr22:47030082..47030087,+#_491ab00c6c920f6a20abd63c05951e9c | p@chr22:47030082..47030087, + |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:42777312..42777314,+#_491ab00c6c920f6a20abd63c05951e9c | p@chr1:42777312..42777314, + |
| 1.78e-29 | FFCP PHASE1:Hg19::chr22:47030082..47030087,+#_491ab00c6c920f6a20abd63c05951e9c | p@chr22:47030082..47030087, + |
| 1.78e-29 | FFCP PHASE2:Hg19::chr2:26700984..26700993,-#_491ab00c6c920f6a20abd63c05951e9c | p7@OTOF |
| 1.78e-29 | FFCP PHASE2:Hg19::chr6:18225523..18225534,-#_491ab00c6c920f6a20abd63c05951e9c | p@chr6:18225523..18225534, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr2:26700331..26700340,-#_491ab00c6c920f6a20abd63c05951e9c | p@chr2:26700331..26700340, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:42777312..42777314,+#_491ab00c6c920f6a20abd63c05951e9c | p@chr1:42777312..42777314, + |
| 1.78e-29 | FFCP PHASE1:Hg19::chr2:26700984..26700993,-#_491ab00c6c920f6a20abd63c05951e9c | p7@OTOF |
| 1.78e-29 | FFCP PHASE1:Hg19::chr6:18225523..18225534,-#_491ab00c6c920f6a20abd63c05951e9c | p@chr6:18225523..18225534, - |
| 7.96e-27 | FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_1c0ac78a8286c61ebb7fe4b63e68bc4d | p@chr10:3477893..3477912, - |
| 7.96e-27 | FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_1c0ac78a8286c61ebb7fe4b63e68bc4d | p@chr10:3477893..3477912, - |
| 6.29e-26 | FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_5dfa1cf03a191c5fb10ef2cf38d67e32 | p@chr1:172926077..172926120, - |
| 6.29e-26 | FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_5dfa1cf03a191c5fb10ef2cf38d67e32 | p@chr1:172926077..172926120, - |
| 6.32e-26 | FFCP PHASE2:Hg19::chrX:128782722..128782738,-#_91412f019c00dda53fee08eb28e1eb82 | p5@APLN |
| 6.32e-26 | FFCP PHASE1:Hg19::chrX:128782722..128782738,-#_91412f019c00dda53fee08eb28e1eb82 | p5@APLN |
| 9.89e-26 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_d1d1bd250d052ac3a10e1bf937c861d5 | p@chr2:693380..693398, + |
| 9.89e-26 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_d1d1bd250d052ac3a10e1bf937c861d5 | p@chr2:693380..693398, + |
| 1.28e-23 | FFCP PHASE1:Hg19::chr6:84849252..84849259,+#_e9c8a2362e6fc65e27c2173ac80c9c9a | p@chr6:84849252..84849259, + |
| 1.28e-23 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_e9c8a2362e6fc65e27c2173ac80c9c9a | p@chr2:133426030..133426041, - |
| 1.28e-23 | FFCP PHASE2:Hg19::chr6:84849252..84849259,+#_e9c8a2362e6fc65e27c2173ac80c9c9a | p@chr6:84849252..84849259, + |
| 1.28e-23 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_e9c8a2362e6fc65e27c2173ac80c9c9a | p@chr2:133426030..133426041, - |
| 1.44e-23 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_5cfc8493a45fc941ed520d13404da091 | p23@TTC39A |
| 1.44e-23 | FFCP PHASE2:Hg19::chr7:28998254..28998261,-#_5cfc8493a45fc941ed520d13404da091 | p10@TRIL |
| 1.44e-23 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_5cfc8493a45fc941ed520d13404da091 | p23@TTC39A |
| 1.44e-23 | FFCP PHASE1:Hg19::chr7:28998254..28998261,-#_5cfc8493a45fc941ed520d13404da091 | p10@TRIL |
| 1.61e-23 | FFCP PHASE2:Hg19::chr7:4051097..4051112,+#_1eddfee44f4ab60bc4f27277366f10a6 | p@chr7:4051097..4051112, + |
| 1.61e-23 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_1eddfee44f4ab60bc4f27277366f10a6 | p@chr15:85403302..85403304, + |
| 1.61e-23 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_1eddfee44f4ab60bc4f27277366f10a6 | p@chr15:85403302..85403304, + |
| 1.61e-23 | FFCP PHASE1:Hg19::chr7:4051097..4051112,+#_1eddfee44f4ab60bc4f27277366f10a6 | p@chr7:4051097..4051112, + |
| 1.8e-23 | FFCP PHASE2:Hg19::chr16:2141529..2141537,+#_8dd2364191a89e7ef5e355bc2330a120 | p@chr16:2141529..2141537, + |
| 1.8e-23 | FFCP PHASE1:Hg19::chr16:2141529..2141537,+#_8dd2364191a89e7ef5e355bc2330a120 | p@chr16:2141529..2141537, + |
| 2.92e-22 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_7ebd35d2a80a2ad19dbea94912ca5233 | p@chr5:74244100..74244117, + |
| 2.92e-22 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_7ebd35d2a80a2ad19dbea94912ca5233 | p@chr5:74244100..74244117, + |
| 5.69e-22 | FFCP PHASE2:Hg19::chr5:148651758..148651769,-#_82c399ea10469267f6ef4c4162366b2d | p@chr5:148651758..148651769, - |
| 5.69e-22 | FFCP PHASE1:Hg19::chr5:148651758..148651769,-#_82c399ea10469267f6ef4c4162366b2d | p@chr5:148651758..148651769, - |
| 2.9e-21 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_ab092c0dbf4547c84f7994ba41bc17dc | p@chr16:86768403..86768437, + |
| 2.9e-21 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_ab092c0dbf4547c84f7994ba41bc17dc | p@chr16:86768403..86768437, + |
| 4.78e-21 | FFCP PHASE1:Hg19::chr17:2076002..2076026,-#_a4de870e64770504718f6d235192ee13 | p@chr17:2076002..2076026, - |
| 4.78e-21 | FFCP PHASE2:Hg19::chr17:2076002..2076026,-#_a4de870e64770504718f6d235192ee13 | p@chr17:2076002..2076026, - |
| 1.26e-20 | FFCP PHASE2:Hg19::chr1:32712897..32712909,+#_5e40d48f7ecbbed3d279382b4c4cc9e8 | p3@FAM167B |
| 1.26e-20 | FFCP PHASE1:Hg19::chr1:32712897..32712909,+#_5e40d48f7ecbbed3d279382b4c4cc9e8 | p3@FAM167B |
| 2.32e-20 | FFCP PHASE2:Hg19::chr11:124628392..124628427,-#_57f140eeb20e3d366266332f0a166c42 | p@chr11:124628392..124628427, - |
| 2.32e-20 | FFCP PHASE1:Hg19::chr11:124628392..124628427,-#_57f140eeb20e3d366266332f0a166c42 | p@chr11:124628392..124628427, - |
| 3.42e-20 | FFCP PHASE2:Hg19::chr3:98591021..98591026,-#_9efe8da278b1f80fde8a7f9d61ba9368 | p1@ENST00000487339 |
| 3.42e-20 | FFCP PHASE1:Hg19::chr3:98591021..98591026,-#_9efe8da278b1f80fde8a7f9d61ba9368 | p1@ENST00000487339 |
| 3.44e-20 | FFCP PHASE1:Hg19::chr19:47231340..47231383,-#_0cdd25374a6cc533f43225fdb84a719d | p@chr19:47231340..47231383, - |
| 3.44e-20 | FFCP PHASE2:Hg19::chr19:47231340..47231383,-#_0cdd25374a6cc533f43225fdb84a719d | p@chr19:47231340..47231383, - |
| 3.58e-20 | FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_f6b2cad9690be4aad4077b21adc3a513 | p@chr19:1826957..1826984, - |
| 3.58e-20 | FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_f6b2cad9690be4aad4077b21adc3a513 | p@chr19:1826957..1826984, - |
| 4.39e-20 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_6c5ba727b091cc42bbd23a4daa10e9d7 | p@chr4:38057595..38057624, - |
| 4.39e-20 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_6c5ba727b091cc42bbd23a4daa10e9d7 | p@chr4:38057595..38057624, - |
| 7.13e-20 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_2acb5fc2e2d44d0621660c41ab3e1c50 | p@chr2:133426106..133426117, - |
| 7.13e-20 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_2acb5fc2e2d44d0621660c41ab3e1c50 | p@chr2:133426106..133426117, - |
| 7.84e-20 | FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_410b3b11b86c1eeefe45f48c0922ec79 | p@chr15:36653709..36653720, - |
| 7.84e-20 | FFCP PHASE1:Hg19::chr9:35753821..35753835,-#_410b3b11b86c1eeefe45f48c0922ec79 | p@chr9:35753821..35753835, - |
| 7.84e-20 | FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_410b3b11b86c1eeefe45f48c0922ec79 | p@chr15:36653709..36653720, - |
| 7.84e-20 | FFCP PHASE2:Hg19::chr9:35753821..35753835,-#_410b3b11b86c1eeefe45f48c0922ec79 | p@chr9:35753821..35753835, - |
| 8.62e-20 | FFCP PHASE1:Hg19::chr4:145568170..145568180,-#_97df2be6694e88379466fd72d7080a52 | p@chr4:145568170..145568180, - |
| 8.62e-20 | FFCP PHASE2:Hg19::chr4:145568170..145568180,-#_97df2be6694e88379466fd72d7080a52 | p@chr4:145568170..145568180, - |
| 1.04e-19 | FFCP PHASE1:Hg19::chr19:38397228..38397266,-#_ad7bb940b7a21fa14a0c14c174b8d92e | p1@WDR87 |
| 1.04e-19 | FFCP PHASE2:Hg19::chr19:38397228..38397266,-#_ad7bb940b7a21fa14a0c14c174b8d92e | p1@WDR87 |
| 1.15e-19 | FFCP PHASE2:Hg19::chr14:91270270..91270281,-#_4639d158ad39e9b3f80a976fbc1ac9f0 | p@chr14:91270270..91270281, - |
| 1.15e-19 | FFCP PHASE1:Hg19::chr14:91270270..91270281,-#_4639d158ad39e9b3f80a976fbc1ac9f0 | p@chr14:91270270..91270281, - |
| 2.44e-19 | FFCP PHASE2:Hg19::chr12:52306196..52306215,+#_25067e386d17b6b53f5e350018ee87b0 | p6@ACVRL1 |
| 2.44e-19 | FFCP PHASE1:Hg19::chr12:52306196..52306215,+#_25067e386d17b6b53f5e350018ee87b0 | p6@ACVRL1 |
| 3.27e-19 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_cf1d2a6e0f19d250ca69d957cfa63d79 | p@chr3:43538305..43538325, - |
| 3.27e-19 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_cf1d2a6e0f19d250ca69d957cfa63d79 | p@chr3:43538305..43538325, - |
| 4.64e-19 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_96735087ce07b97844408cd6127be310 | p@chr17:171147..171161, + |
| 4.64e-19 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_96735087ce07b97844408cd6127be310 | p@chr17:171147..171161, + |
| 5.39e-19 | FFCP PHASE1:Hg19::chr1:22211913..22211920,+#_5f74a123ef0aaaa6e486f8b335a496e5 | p@chr1:22211913..22211920, + |
| 5.39e-19 | FFCP PHASE2:Hg19::chr1:22211913..22211920,+#_5f74a123ef0aaaa6e486f8b335a496e5 | p@chr1:22211913..22211920, + |
| 1.99e-18 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_08e64f6c1f6662517a1523ef65d4a6b2 | p7@HOXA10 |
| 1.99e-18 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_08e64f6c1f6662517a1523ef65d4a6b2 | p7@HOXA10 |
| 2.69e-18 | FFCP PHASE2:Hg19::chr1:32041957..32041990,+#_77efd865b366261444841be945750f76 | p3@TINAGL1 |
| 2.69e-18 | FFCP PHASE1:Hg19::chr1:32041957..32041990,+#_77efd865b366261444841be945750f76 | p3@TINAGL1 |
| 4.1e-18 | FFCP PHASE1:Hg19::chr6:132270228..132270243,-#_981f5aa8d3e60cd2fe48039e8a4d8ed2 | p17@CTGF |
| 4.1e-18 | FFCP PHASE2:Hg19::chr6:132270228..132270243,-#_981f5aa8d3e60cd2fe48039e8a4d8ed2 | p17@CTGF |
| 5.7e-18 | FFCP PHASE2:Hg19::chr11:940729..940745,+#_e2133ea53eac1704b0d059c4da3463e7 | p5@AP2A2 |
| 5.7e-18 | FFCP PHASE1:Hg19::chr11:940729..940745,+#_e2133ea53eac1704b0d059c4da3463e7 | p5@AP2A2 |
| 6.5e-18 | FFCP PHASE2:Hg19::chr19:42007093..42007107,-#_6b6533d529869c506374fba88feefb27 | p@chr19:42007093..42007107, - |
| 6.5e-18 | FFCP PHASE1:Hg19::chr19:42007093..42007107,-#_6b6533d529869c506374fba88feefb27 | p@chr19:42007093..42007107, - |
| 6.99e-18 | FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_c60fa069a080c68b06980d5c5719627d | p@chrX:128781853..128781866, - |
| 6.99e-18 | FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_c60fa069a080c68b06980d5c5719627d | p@chrX:128781853..128781866, - |
| 1.24e-17 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_86a1608115d90cae73b4500af0331939 | p@chr16:86604624..86604648, + |
| 1.24e-17 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_86a1608115d90cae73b4500af0331939 | p@chr16:86604624..86604648, + |
