UBERON:0001473: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001473
|name=lymphatic vessel
|namespace=
|def="A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft o...") |
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|part_of=UBERON:0004536;;UBERON:0006558 | |part_of=UBERON:0004536;;UBERON:0006558 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
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Revision as of 17:12, 15 June 2012
| Name: | lymphatic vessel | ||
|---|---|---|---|
| Definition: | "A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure[BTO]." [BTO:0000752, Wikipedia:Lymphatic_vessel] | ||
| Xrefs: |
| ||
| Synonyms: | "lymph vessel" EXACT [] | ||
| Alt_id: | UBERON:FMA_30315-FMA_5034-MA_0000138-MA_0000139-MIAA_0000197-XAO_0000375-ZFA_0005105 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000055(vessel) |
|---|---|
| disjoint_from: | UBERON:0001981(blood vessel) |
| part_of: | UBERON:0004536(lymph vasculature),UBERON:0006558(lymphatic part of lymphoid system) |
Children
| part of: | CL:0002138 (endothelial cell of lymphatic vessel),CL:0002554 (fibroblast of lymphatic vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
- 11393-118C7 (Endothelial Cells - Lymphatic, donor3)
- 11506-119G3 (Fibroblast - Lymphatic, donor1)
- 11586-120G2 (Fibroblast - Lymphatic, donor2)
- 11638-122C9
- 11667-122G2 (Fibroblast - Lymphatic, donor3)
- 11715-123C5
- 11733-123E5
- 12260-130A1 (Lymphatic Endothelial cells response to VEGFC)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001473 (lymphatic vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.05e-102 | FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_b0da3c5270919cc8b8b5c331ce4489db | p@chr9:13432964..13432971, - |
| 5.05e-102 | FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_b0da3c5270919cc8b8b5c331ce4489db | p@chr9:13432964..13432971, - |
| 4.74e-79 | FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_9b123895fc8a30fecdac24ff4c045c65 | p15@JAK1 |
| 4.74e-79 | FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_9b123895fc8a30fecdac24ff4c045c65 | p15@JAK1 |
| 1.08e-76 | FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_a40f37cebdcf9c01c13767036ad3fcfd | p@chr3:30560368..30560379, + |
| 1.08e-76 | FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_a40f37cebdcf9c01c13767036ad3fcfd | p@chr3:30560368..30560379, + |
| 6.73e-74 | FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_216540668d2afd258bb99051e0f2339c | p@chr17:28534912..28534942, - |
| 6.73e-74 | FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_216540668d2afd258bb99051e0f2339c | p@chr17:28534912..28534942, - |
| 2.1e-68 | FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_48933b1a96f108782f7e2725dc832fa6 | p14@EFEMP1 |
| 2.1e-68 | FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_48933b1a96f108782f7e2725dc832fa6 | p14@EFEMP1 |
| 1.18e-65 | FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_5e935c619f8913021070ac5d34795f20 | p7@PLA2G4C |
| 1.18e-65 | FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_5e935c619f8913021070ac5d34795f20 | p7@PLA2G4C |
| 3.64e-64 | FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_1a1897af2f4a990b66de8db131b805af | p@chr6:74848034..74848043, + |
| 3.64e-64 | FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_1a1897af2f4a990b66de8db131b805af | p@chr6:74848034..74848043, + |
| 6.87e-57 | FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_ab4700e5d238d17fa5a754d35ce3c8fc | p1@AK126470 |
| 6.87e-57 | FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_ab4700e5d238d17fa5a754d35ce3c8fc | p1@AK126470 |
| 9.15e-57 | FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_e39ee3e40e109e59d96379e0f623be65 | p25@CD36 |
| 9.15e-57 | FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_e39ee3e40e109e59d96379e0f623be65 | p25@CD36 |
| 1.06e-56 | FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_e05761710d59728963da5680ab144a24 | p17@PLSCR4 |
| 1.06e-56 | FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_e05761710d59728963da5680ab144a24 | p17@PLSCR4 |
| 1.22e-56 | FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_f6b9637c5137fe327094b1c395153d50 | p17@RASGRP3 |
| 1.22e-56 | FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_f6b9637c5137fe327094b1c395153d50 | p17@RASGRP3 |
| 1.41e-56 | FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_7d9d0f04c71fafb5dd2316e337ef8861 | p2@ENST00000428006 |
| 1.41e-56 | FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_7d9d0f04c71fafb5dd2316e337ef8861 | p2@ENST00000428006 |
| 4.57e-56 | FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_7c69fa12c8098d7ce18a39f392837f26 | p@chr17:28534879..28534889, - |
| 4.57e-56 | FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_7c69fa12c8098d7ce18a39f392837f26 | p@chr12:46807404..46807413, + |
| 4.57e-56 | FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_7c69fa12c8098d7ce18a39f392837f26 | p@chr17:28534879..28534889, - |
| 4.57e-56 | FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_7c69fa12c8098d7ce18a39f392837f26 | p@chr12:46807404..46807413, + |
| 6.66e-56 | FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_44aaebbcaa8f1ff95cde992ad9861126 | p26@CD36 |
| 6.66e-56 | FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_44aaebbcaa8f1ff95cde992ad9861126 | p26@CD36 |
| 2.32e-54 | FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_4915e22e0732ec2620e99cdacbf6f9b6 | p10@RBPMS |
| 2.32e-54 | FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_4915e22e0732ec2620e99cdacbf6f9b6 | p10@RBPMS |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_33d233b9adeb6b47b025f5c3e10358f3 | p58@ANK2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_33d233b9adeb6b47b025f5c3e10358f3 | p58@ANK2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_33d233b9adeb6b47b025f5c3e10358f3 | p54@PDE4B |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_33d233b9adeb6b47b025f5c3e10358f3 | p54@PDE4B |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_33d233b9adeb6b47b025f5c3e10358f3 | p23@RASGRP3 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_33d233b9adeb6b47b025f5c3e10358f3 | p23@RASGRP3 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794408..108794422, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794429..108794441, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794408..108794422, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr17:75873825..75873826, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr17:75873825..75873826, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794429..108794441, + |
| 9.58e-48 | FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_0c3fbfaddf62fad60cda61850c35951e | p@chr4:189881560..189881604, - |
| 9.58e-48 | FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_0c3fbfaddf62fad60cda61850c35951e | p@chr4:189881560..189881604, - |
| 1.55e-47 | FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_6b5e3bac26c72cd9a2d1ad57cb8f76a5 | p@chr4:90857427..90857438, + |
| 1.55e-47 | FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_6b5e3bac26c72cd9a2d1ad57cb8f76a5 | p@chr4:90857427..90857438, + |
| 1.71e-47 | FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_a94d66a755313bbf6a71a06e9e704399 | p@chr10:4823152..4823165, - |
| 1.71e-47 | FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_a94d66a755313bbf6a71a06e9e704399 | p@chr10:4823152..4823165, - |
| 3.05e-47 | FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_66f1475ca6e56ca9a3a0d8a0f8ab9b83 | p@chr6:49534004..49534016, + |
| 3.05e-47 | FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_66f1475ca6e56ca9a3a0d8a0f8ab9b83 | p@chr6:49534004..49534016, + |
| 7.08e-47 | FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_774c9ec08928917759aa000d38205f22 | p@chr12:96841308..96841312, + |
| 7.08e-47 | FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_774c9ec08928917759aa000d38205f22 | p@chr12:96841308..96841312, + |
| 3.73e-45 | FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_a24165d82f288bd195b0197e407e366c | p6@HYI |
| 3.73e-45 | FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_a24165d82f288bd195b0197e407e366c | p6@HYI |
| 4.34e-45 | FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_e8de854ebce651115028ee18b4731f10 | p@chr3:34262215..34262222, + |
| 4.34e-45 | FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_e8de854ebce651115028ee18b4731f10 | p@chr3:34262215..34262222, + |
| 5.04e-45 | FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_82c5782696cccd3d99c342072db59cd2 | p7@WDR7 |
| 5.04e-45 | FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_82c5782696cccd3d99c342072db59cd2 | p7@WDR7 |
| 6.81e-45 | FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_ff87b515eec7b4a61826733d07347632 | p@chr7:10196589..10196595, - |
| 6.81e-45 | FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_ff87b515eec7b4a61826733d07347632 | p@chr7:10196589..10196595, - |
| 7.92e-45 | FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_3f5968e6dfa5f3fa3bd13787feb6f9c6 | p@chr2:62705562..62705579, + |
| 7.92e-45 | FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_3f5968e6dfa5f3fa3bd13787feb6f9c6 | p@chr2:62705562..62705579, + |
| 3.69e-44 | FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_657e7ea1f19ccb6ffec237be719bbfd7 | p@chr4:90856951..90856962, + |
| 3.69e-44 | FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_657e7ea1f19ccb6ffec237be719bbfd7 | p@chr4:90856951..90856962, + |
| 3.69e-44 | FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_657e7ea1f19ccb6ffec237be719bbfd7 | p12@PTPRB |
| 3.69e-44 | FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_657e7ea1f19ccb6ffec237be719bbfd7 | p12@PTPRB |
| 3.18e-40 | FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_3063c1b80fb4aa409af5e85c8041be42 | p@chr12:105882068..105882076, + |
| 3.18e-40 | FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_3063c1b80fb4aa409af5e85c8041be42 | p@chr12:105882068..105882076, + |
| 3.89e-40 | FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_9683dbb41cd8cf47d452080885c2c770 | p@chr8:6459787..6459796, + |
| 3.89e-40 | FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_9683dbb41cd8cf47d452080885c2c770 | p@chr8:6459787..6459796, + |
| 1.55e-39 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_3f0d94d5c4d805ddc01ad542d7065484 | p@chr4:38057595..38057624, - |
| 1.55e-39 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_3f0d94d5c4d805ddc01ad542d7065484 | p@chr4:38057595..38057624, - |
| 6.2e-39 | FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_cc242f9a7f86bcbcd50776105ab9c9a0 | p1@ENST00000426468 |
| 6.2e-39 | FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_cc242f9a7f86bcbcd50776105ab9c9a0 | p1@ENST00000426468 |
| 9.18e-38 | FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_0b8be2d80cf587dedd73f8b0b05ee2b6 | p13@MSR1 |
| 9.18e-38 | FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_0b8be2d80cf587dedd73f8b0b05ee2b6 | p13@MSR1 |
| 1.51e-37 | FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_acd3898d41f591d5f16ba6799d983294 | p3@LOC441179 |
| 1.51e-37 | FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_acd3898d41f591d5f16ba6799d983294 | p3@LOC441179 |
| 1.95e-37 | FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_0644ba878c78a983eb041597f377a062 | p@chr2:27487913..27487933, - |
| 1.95e-37 | FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_0644ba878c78a983eb041597f377a062 | p@chr2:27487913..27487933, - |
| 5.85e-37 | FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_4bd52bb53b90b4d6c22589a9d11cb3b2 | p5@ANGPT2 |
| 5.85e-37 | FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_4bd52bb53b90b4d6c22589a9d11cb3b2 | p5@ANGPT2 |
| 1.23e-36 | FFCP PHASE1:Hg19::chr6:168195926..168195943,+#_7c45e301ab0db7c4142d54663367033e | p1@LOC441179 |
| 1.23e-36 | FFCP PHASE2:Hg19::chr6:168195926..168195943,+#_7c45e301ab0db7c4142d54663367033e | p1@LOC441179 |
| 1.33e-36 | FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_9e60badab6ac6a881883c81177258b15 | p8@EXOC6 |
| 1.33e-36 | FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_9e60badab6ac6a881883c81177258b15 | p8@EXOC6 |
| 5.59e-36 | FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_a9cd0ab17c61ae3b6c7ef311b3be3d4b | p5@MSR1 |
| 5.59e-36 | FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_a9cd0ab17c61ae3b6c7ef311b3be3d4b | p5@MSR1 |
| 1.86e-34 | FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_2bc8d45d843feca748efa0983defc651 | p@chr17:79426425..79426444, + |
| 1.86e-34 | FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_2bc8d45d843feca748efa0983defc651 | p@chr17:79426425..79426444, + |
| 3.14e-34 | FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_82d34aebe64357d2db2e9f514b82b917 | p@chr11:57543275..57543296, + |
| 3.14e-34 | FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_82d34aebe64357d2db2e9f514b82b917 | p@chr11:57543275..57543296, + |
| 2.31e-33 | FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_c8be5d8d4d25c6612d9beb34cb851c46 | p@chr19:45226133..45226157, - |
| 2.31e-33 | FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_c8be5d8d4d25c6612d9beb34cb851c46 | p@chr19:45226133..45226157, - |
| 2.61e-33 | FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_f3d251d62a727e9d8b0b663f947f3359 | p43@SCHIP1 |
| 2.61e-33 | FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_f3d251d62a727e9d8b0b663f947f3359 | p43@SCHIP1 |
| 7.63e-33 | FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_8f9bd7ae89bd7f18c4f4dd56cfa6b188 | p10@PTPRB |
| 7.63e-33 | FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_8f9bd7ae89bd7f18c4f4dd56cfa6b188 | p10@PTPRB |
