UBERON:0001768: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001768
|name=vascular layer of eyeball
|namespace=
|def="pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascul...") |
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|part_of=UBERON:0001801 | |part_of=UBERON:0001801 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:13, 15 June 2012
| Name: | vascular layer of eyeball | ||
|---|---|---|---|
| Definition: | "pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascular coat of the eyeball, consisting of the CHOROID; CILIARY BODY; and IRIS, which are continuous with each other. (Cline et al., Dictionary of Visual Science, 4th ed)[GAID]." [Wikipedia:Uvea] | ||
| Xrefs: |
| ||
| Synonyms: |
"tunica vasculosa of eyeball" EXACT [] "uvea" EXACT [] "uveal tract" EXACT [] | ||
| Comments: | TODO - check child terms, isa vs partof | ||
| Alt_id: | UBERON:FMA_58103-MA_0002480 | ||
| Subset: | uberon_slim |
200px-Gray869.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002049(vasculature),UBERON:0002203(vasculature of eye) |
|---|---|
| part_of: | UBERON:0001801(anterior segment of eyeball) |
Children
| part of: | UBERON:0003956 (aqueous drainage system),UBERON:0011892 (anterior uvea) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11532-120A2 (Trabecular Meshwork Cells, donor1)
- 11610-120I8
- 11612-122A1 (Trabecular Meshwork Cells, donor2)
- 11691-122I8
- 11693-123A1 (Trabecular Meshwork Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001768 (vascular layer of eyeball), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.51e-104 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_ba6b37ed99feb7bc36ca9c40c3570f29 | p@chrX:106198807..106198826, - |
| 1.51e-104 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_ba6b37ed99feb7bc36ca9c40c3570f29 | p@chrX:106198807..106198826, - |
| 2.17e-75 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_d53d7548042a5597d163dcb622a88b22 | p1@BC033145 |
| 2.17e-75 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_d53d7548042a5597d163dcb622a88b22 | p1@BC033145 |
| 2.58e-74 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_2ae0f0978bb6d228451c5ea2547b9f4e | p@chr7:115723897..115723915, - |
| 2.58e-74 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_2ae0f0978bb6d228451c5ea2547b9f4e | p@chr7:115723897..115723915, - |
| 4.26e-74 | FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_347466dac98c237094927410b18bf546 | p@chr12:97856211..97856221, + |
| 4.26e-74 | FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_347466dac98c237094927410b18bf546 | p@chr12:97856211..97856221, + |
| 8.15e-60 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_cde879dd48de14491fff24a50a22115e | p@chr7:115723925..115723935, - |
| 8.15e-60 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_cde879dd48de14491fff24a50a22115e | p@chr7:115723925..115723935, - |
| 9.96e-60 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_346b1607b0e41f5e8debcf9374bd2498 | p@chr2:35680607..35680613, - |
| 9.96e-60 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_346b1607b0e41f5e8debcf9374bd2498 | p@chr2:35680607..35680613, - |
| 1.49e-59 | FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_219b4344e9cb41be267fc0a2cbbbd2ed | p@chr13:36052762..36052767, - |
| 1.49e-59 | FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_219b4344e9cb41be267fc0a2cbbbd2ed | p5@SFRP1 |
| 1.49e-59 | FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_219b4344e9cb41be267fc0a2cbbbd2ed | p@chr13:36052762..36052767, - |
| 1.49e-59 | FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_219b4344e9cb41be267fc0a2cbbbd2ed | p5@SFRP1 |
| 1.82e-59 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_491d9ba6049372df761b618ee562715c | p@chr7:131803806..131803815, + |
| 1.82e-59 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_491d9ba6049372df761b618ee562715c | p@chr7:131803806..131803815, + |
| 2.72e-59 | FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_04afc7ab75636d8e2cf6aefa8bef1102 | p@chr16:58896129..58896134, - |
| 2.72e-59 | FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_04afc7ab75636d8e2cf6aefa8bef1102 | p@chr16:58896129..58896134, - |
| 1.03e-52 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_220f12ddc7a08de870b357ca7d940685 | p1@CLRN1 |
| 1.03e-52 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_220f12ddc7a08de870b357ca7d940685 | p1@CLRN1 |
| 2.01e-52 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_d690bec0521c26fb677a553bd7fd5c8f | p@chr8:124692287..124692298, + |
| 2.01e-52 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_d690bec0521c26fb677a553bd7fd5c8f | p@chr8:124692287..124692298, + |
| 3.84e-50 | FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_d7409a5256786ab89631a636fe23d1c8 | p33@PRKCH |
| 3.84e-50 | FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_d7409a5256786ab89631a636fe23d1c8 | p33@PRKCH |
| 7.51e-50 | FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_cc5dfe1240ebdd9475b44f568e45a5f1 | p2@RIPPLY1 |
| 7.51e-50 | FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_cc5dfe1240ebdd9475b44f568e45a5f1 | p2@RIPPLY1 |
| 9.31e-45 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_18ab8c895074aba5876b9f62205a9967 | p7@PTPRU |
| 9.31e-45 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_18ab8c895074aba5876b9f62205a9967 | p7@PTPRU |
| 9.76e-45 | FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_3880c830343f8144d8b89fbe32a57c79 | p@chr2:210798666..210798677, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_3880c830343f8144d8b89fbe32a57c79 | p@chr2:210798666..210798677, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_3880c830343f8144d8b89fbe32a57c79 | p@chr5:78112479..78112482, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_3880c830343f8144d8b89fbe32a57c79 | p@chr5:78112479..78112482, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_f55b0ac2b0f0da7f51da4feffc351142 | p@chr13:36052713..36052724, - |
| 1.52e-44 | FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_f55b0ac2b0f0da7f51da4feffc351142 | p@chr13:36052713..36052724, - |
| 4.21e-43 | FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_82e0d20d4544b3e32be55904eafb47c0 | p1@ENST00000526061 |
| 4.21e-43 | FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_82e0d20d4544b3e32be55904eafb47c0 | p1@ENST00000526061 |
| 6.48e-43 | FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_9344cb9b9542f3d4196f0397ff077c40 | p@chr10:91294399..91294401, - |
| 6.48e-43 | FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_9344cb9b9542f3d4196f0397ff077c40 | p@chr10:91294399..91294401, - |
| 9.96e-43 | FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_99965d68375fa020c0d08bdcbcbefcab | p16@HECW1 |
| 9.96e-43 | FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_99965d68375fa020c0d08bdcbcbefcab | p16@HECW1 |
| 4.07e-42 | FFCP PHASE2:Hg19::chr22:31536360..31536389,-#_823de92873f13e36e6866d3cff3f2970 | p4@PLA2G3 |
| 4.07e-42 | FFCP PHASE1:Hg19::chr22:31536360..31536389,-#_823de92873f13e36e6866d3cff3f2970 | p4@PLA2G3 |
| 2.21e-41 | FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_97d5dc6982c67c4fa199a744c140eac5 | p@chr2:66670833..66670853, + |
| 2.21e-41 | FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_97d5dc6982c67c4fa199a744c140eac5 | p@chr2:66670833..66670853, + |
| 3.35e-41 | FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_65e034c513ee4b045d649f6972efe6ac | p1@OPTC |
| 3.35e-41 | FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_65e034c513ee4b045d649f6972efe6ac | p1@OPTC |
| 4.56e-41 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_906d1c9e5847addacc66cd279be058ea | p3@SIX6 |
| 4.56e-41 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_906d1c9e5847addacc66cd279be058ea | p3@SIX6 |
| 1.28e-40 | FFCP PHASE2:Hg19::chr13:36050976..36050990,+#_3b9ddc64f5cd12b99011b3d7b36b0398 | p8@NBEA |
| 1.28e-40 | FFCP PHASE1:Hg19::chr13:36050976..36050990,+#_3b9ddc64f5cd12b99011b3d7b36b0398 | p8@NBEA |
| 1.92e-40 | FFCP PHASE1:Hg19::chr14:68569696..68569698,-#_44dda8c7a0768f45cec3b1a1500e5f92 | p@chr14:68569696..68569698, - |
| 1.92e-40 | FFCP PHASE2:Hg19::chr14:68569696..68569698,-#_44dda8c7a0768f45cec3b1a1500e5f92 | p@chr14:68569696..68569698, - |
| 2.55e-38 | FFCP PHASE1:Hg19::chr14:80892074..80892111,-#_b4593b77e01ebd987adb580f623556ff | p@chr14:80892074..80892111, - |
| 2.55e-38 | FFCP PHASE2:Hg19::chr14:80892074..80892111,-#_b4593b77e01ebd987adb580f623556ff | p@chr14:80892074..80892111, - |
| 4.9e-38 | FFCP PHASE2:Hg19::chr2:45166478..45166502,-#_ff2c861df929670ea1d907cd5e1f07d6 | p3@ENST00000437916 |
| 4.9e-38 | FFCP PHASE1:Hg19::chr2:45166478..45166502,-#_ff2c861df929670ea1d907cd5e1f07d6 | p3@ENST00000437916 |
| 9.19e-38 | FFCP PHASE2:Hg19::chr8:94713146..94713159,+#_882f45b48a3fc35308dab6ea5388dba5 | p8@FAM92A1 |
| 9.19e-38 | FFCP PHASE1:Hg19::chr8:94713146..94713159,+#_882f45b48a3fc35308dab6ea5388dba5 | p8@FAM92A1 |
| 1.07e-37 | FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_af3414c93ce13bae25140b362725f100 | p1@ENST00000448923 |
| 1.07e-37 | FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_af3414c93ce13bae25140b362725f100 | p1@ENST00000448923 |
| 1.18e-37 | FFCP PHASE1:Hg19::chr4:183006122..183006131,-#_cd979cb148eee47eef90c3ed98a48d52 | p3@ENST00000505537 |
| 1.18e-37 | FFCP PHASE2:Hg19::chr4:183006122..183006131,-#_cd979cb148eee47eef90c3ed98a48d52 | p3@ENST00000505537 |
| 5.61e-36 | FFCP PHASE2:Hg19::chr8:99076582..99076599,+#_05a65799e0917bffe5ff0919214b97e4 | p6@C8orf47 |
| 5.61e-36 | FFCP PHASE1:Hg19::chr8:99076582..99076599,+#_05a65799e0917bffe5ff0919214b97e4 | p6@C8orf47 |
| 2.8e-35 | FFCP PHASE1:Hg19::chr4:77356957..77356973,+#_80cd6af93969a728f8b286284186065a | p20@SHROOM3 |
| 2.8e-35 | FFCP PHASE2:Hg19::chr4:77356957..77356973,+#_80cd6af93969a728f8b286284186065a | p20@SHROOM3 |
| 4.14e-34 | FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_46204238d7680ca40fd7435c68ef4d72 | p10@NLGN1 |
| 4.14e-34 | FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_46204238d7680ca40fd7435c68ef4d72 | p10@NLGN1 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr19:30716539..30716546,+#_73337ef349147f7a54f9a3f3a48f2eb8 | p@chr19:30716539..30716546, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr19:30716539..30716546,+#_73337ef349147f7a54f9a3f3a48f2eb8 | p@chr19:30716539..30716546, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr2:63196015..63196016,+#_73337ef349147f7a54f9a3f3a48f2eb8 | p@chr2:63196015..63196016, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr2:63196015..63196016,+#_73337ef349147f7a54f9a3f3a48f2eb8 | p@chr2:63196015..63196016, + |
| 5.98e-34 | FFCP PHASE2:Hg19::chr1:218579326..218579337,+#_a763a092e293ac46b9f98170a1d2be8b | p@chr1:218579326..218579337, + |
| 5.98e-34 | FFCP PHASE1:Hg19::chr1:218579326..218579337,+#_a763a092e293ac46b9f98170a1d2be8b | p@chr1:218579326..218579337, + |
| 6.72e-34 | FFCP PHASE2:Hg19::chr3:110846331..110846333,+#_62d915117984b308ad0ec4952b50e9a0 | p@chr3:110846331..110846333, + |
| 6.72e-34 | FFCP PHASE1:Hg19::chr3:110846331..110846333,+#_62d915117984b308ad0ec4952b50e9a0 | p@chr3:110846331..110846333, + |
| 7.07e-34 | FFCP PHASE1:Hg19::chr8:53853688..53853698,-#_b1b67f7de6eda41cb997d8c801aefce9 | p3@BC033145 |
| 7.07e-34 | FFCP PHASE2:Hg19::chr8:53853688..53853698,-#_b1b67f7de6eda41cb997d8c801aefce9 | p3@BC033145 |
| 7.51e-34 | FFCP PHASE2:Hg19::chr2:237677787..237677800,+#_f37c37a26806eb315d6e8f4825a7fa8c | p@chr2:237677787..237677800, + |
| 7.51e-34 | FFCP PHASE1:Hg19::chr2:237677787..237677800,+#_f37c37a26806eb315d6e8f4825a7fa8c | p@chr2:237677787..237677800, + |
| 8.35e-34 | FFCP PHASE2:Hg19::chr15:79501729..79501736,+#_0c7c17858ee4b9204b7cdfe5e36aa8c2 | p1@MIR184 |
| 8.35e-34 | FFCP PHASE1:Hg19::chr15:79501729..79501736,+#_0c7c17858ee4b9204b7cdfe5e36aa8c2 | p1@MIR184 |
| 9.39e-34 | FFCP PHASE2:Hg19::chr11:89224826..89224839,-#_a0d7e49ba8f40dfd2b6561ec94600297 | p14@NOX4 |
| 9.39e-34 | FFCP PHASE1:Hg19::chr11:89224826..89224839,-#_a0d7e49ba8f40dfd2b6561ec94600297 | p14@NOX4 |
| 9.87e-34 | FFCP PHASE2:Hg19::chr3:50191610..50191612,-#_14c1a8eca754cbc12241caf5d5d9eef5 | p@chr3:50191610..50191612, - |
| 9.87e-34 | FFCP PHASE1:Hg19::chr3:50191610..50191612,-#_14c1a8eca754cbc12241caf5d5d9eef5 | p@chr3:50191610..50191612, - |
| 1.17e-33 | FFCP PHASE2:Hg19::chr1:12416343..12416350,+#_cda4757e934b77df4c947c4c63916cb6 | p@chr1:12416343..12416350, + |
| 1.17e-33 | FFCP PHASE1:Hg19::chr1:12416343..12416350,+#_cda4757e934b77df4c947c4c63916cb6 | p@chr1:12416343..12416350, + |
| 1.17e-33 | FFCP PHASE1:Hg19::chrX:106142727..106142730,-#_cda4757e934b77df4c947c4c63916cb6 | p@chrX:106142727..106142730, - |
| 1.17e-33 | FFCP PHASE2:Hg19::chr3:139258648..139258667,+#_cda4757e934b77df4c947c4c63916cb6 | p1@ENST00000381790 |
| 1.17e-33 | FFCP PHASE2:Hg19::chrX:106142727..106142730,-#_cda4757e934b77df4c947c4c63916cb6 | p@chrX:106142727..106142730, - |
| 1.17e-33 | FFCP PHASE1:Hg19::chr3:139258648..139258667,+#_cda4757e934b77df4c947c4c63916cb6 | p1@ENST00000381790 |
| 3.98e-33 | FFCP PHASE2:Hg19::chr11:31816236..31816261,-#_398bcb06c0d93d872d509fe59cd07416 | p@chr11:31816236..31816261, - |
| 3.98e-33 | FFCP PHASE1:Hg19::chr11:31816236..31816261,-#_398bcb06c0d93d872d509fe59cd07416 | p@chr11:31816236..31816261, - |
| 9.74e-32 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_90534a007e5c78152f436e413a7e1d5d | p10@SIX3 |
| 9.74e-32 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_90534a007e5c78152f436e413a7e1d5d | p10@SIX3 |
| 1.14e-31 | FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_5dce4c8e9aac5c0bd79758e94d4a72df | p2@SIX6 |
| 1.14e-31 | FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_5dce4c8e9aac5c0bd79758e94d4a72df | p2@SIX6 |
