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Revision as of 17:25, 15 June 2012

Name:kidney field
Definition:"region of the embryo into the area in which the kidney rudiment will develop." [GO:0072004, GOC:mtg_kidney_jan10]
Synonyms: "kidney anlage" RELATED [GOC:mtg_kidney_jan10]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo)



Children

develops from:UBERON:0005095 (kidney rudiment)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007687 (kidney field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.73e-86FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_6c275b85209f50c58566f905594e060bp4@PAX2
1.73e-86FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_6c275b85209f50c58566f905594e060bp4@PAX2
2.28e-80FFCP PHASE1:Mm9::chr2:74542680..74542705,+#_d40c18114037deb0685662971f859592p6@Hoxd8
2.28e-80FFCP PHASE2:Mm9::chr2:74542680..74542705,+#_d40c18114037deb0685662971f859592p6@Hoxd8
3.64e-74FFCP PHASE2:Mm9::chr2:74542589..74542602,+#_0bf015eea8f65586dddfa104e305f655p8@Hoxd8
3.64e-74FFCP PHASE1:Mm9::chr2:74542589..74542602,+#_0bf015eea8f65586dddfa104e305f655p8@Hoxd8
5.03e-73FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_ca0d09a3a40aa2431e1fa3f4f26d9679p3@PAX2
5.03e-73FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_ca0d09a3a40aa2431e1fa3f4f26d9679p3@PAX2
3.13e-70FFCP PHASE1:Hg19::chr2:693380..693398,+#_741ec3b01be1e0bddd52095ea6142564p@chr2:693380..693398, +
3.13e-70FFCP PHASE2:Hg19::chr2:693380..693398,+#_741ec3b01be1e0bddd52095ea6142564p@chr2:693380..693398, +
5.44e-68FFCP PHASE2:Mm9::chr19:44824107..44824111,-#_330f1983ed34a9eb14258717f13a863ep@chr19:44824107..44824111, -
5.44e-68FFCP PHASE1:Mm9::chr19:44824107..44824111,-#_330f1983ed34a9eb14258717f13a863ep@chr19:44824107..44824111, -
6.57e-66FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_3c2ed7c9e4a047b1cc2b8142e090e4a2p7@HOXA10
6.57e-66FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_3c2ed7c9e4a047b1cc2b8142e090e4a2p7@HOXA10
2.27e-64FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_332ec6b0e4184053370c3fb8fd4d015dp2@PAX2
2.27e-64FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_332ec6b0e4184053370c3fb8fd4d015dp2@PAX2
2.61e-63FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_6742dcc6bdc49492b8ee8c96636e18c8p4@AIF1L
2.61e-63FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_6742dcc6bdc49492b8ee8c96636e18c8p4@AIF1L
9.07e-63FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_7ec5a4716c683c64607219426732d5a3p1@ENST00000418041, p1@ENST00000443104
9.07e-63FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_7ec5a4716c683c64607219426732d5a3p1@ENST00000418041, p1@ENST00000443104
1.43e-62FFCP PHASE1:Mm9::chr10:3291561..3291580,+#_486e2476e164fb81c39d877b329ff0eap@chr10:3291561..3291580, +
1.43e-62FFCP PHASE2:Mm9::chr10:3291561..3291580,+#_486e2476e164fb81c39d877b329ff0eap@chr10:3291561..3291580, +
7.58e-62FFCP PHASE2:Mm9::chr19:44821149..44821161,+#_b1c30190b8e06fa6fa325da7d3f929c8p@chr19:44821149..44821161, +
7.58e-62FFCP PHASE1:Mm9::chr19:44821149..44821161,+#_b1c30190b8e06fa6fa325da7d3f929c8p@chr19:44821149..44821161, +
7.58e-62FFCP PHASE2:Mm9::chr19:44899724..44899728,+#_b1c30190b8e06fa6fa325da7d3f929c8p@chr19:44899724..44899728, +
7.58e-62FFCP PHASE1:Mm9::chr19:44899724..44899728,+#_b1c30190b8e06fa6fa325da7d3f929c8p@chr19:44899724..44899728, +
4.78e-61FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_c1749f44802b052767ea11a918757afep4@MEGF11
4.78e-61FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_c1749f44802b052767ea11a918757afep4@MEGF11
1.07e-59FFCP PHASE1:Mm9::chr8:107148422..107148433,+#_a15588a85182792edaef23a04918594fp@chr8:107148422..107148433, +
1.07e-59FFCP PHASE2:Mm9::chr8:107148422..107148433,+#_a15588a85182792edaef23a04918594fp@chr8:107148422..107148433, +
6.23e-58FFCP PHASE1:Mm9::chr10:50689167..50689171,+#_2496630b9ec15aeb7c4126819bc372c4p@chr10:50689167..50689171, +
6.23e-58FFCP PHASE2:Mm9::chr10:50689167..50689171,+#_2496630b9ec15aeb7c4126819bc372c4p@chr10:50689167..50689171, +
8.0e-58FFCP PHASE1:Mm9::chr5:24755801..24755819,+#_989fd965d9e55162ca3a98163b01472cp@chr5:24755801..24755819, +
8.0e-58FFCP PHASE2:Mm9::chr5:24755801..24755819,+#_989fd965d9e55162ca3a98163b01472cp@chr5:24755801..24755819, +
1.03e-57FFCP PHASE2:Mm9::chr19:59532611..59532623,+#_333878a2681b6979ba7f11f6bb999953p@chr19:59532611..59532623, +
1.03e-57FFCP PHASE1:Mm9::chr19:59532611..59532623,+#_333878a2681b6979ba7f11f6bb999953p@chr19:59532611..59532623, +
2.2e-56FFCP PHASE2:Mm9::chr4:44956599..44956663,+#_5e0a26564f467904afcb09ab0d1ac528p1@ENSMUST00000154177
2.2e-56FFCP PHASE1:Mm9::chr4:44956599..44956663,+#_5e0a26564f467904afcb09ab0d1ac528p1@ENSMUST00000154177
9.89e-56FFCP PHASE1:Mm9::chr10:79277411..79277429,+#_101257dce07bd8430f10a0d4dbace910p@chr10:79277411..79277429, +
9.89e-56FFCP PHASE1:Mm9::chr19:17554168..17554181,+#_101257dce07bd8430f10a0d4dbace910p@chr19:17554168..17554181, +
9.89e-56FFCP PHASE2:Mm9::chr19:17554168..17554181,+#_101257dce07bd8430f10a0d4dbace910p@chr19:17554168..17554181, +
9.89e-56FFCP PHASE2:Mm9::chr7:31244771..31244782,+#_101257dce07bd8430f10a0d4dbace910p2@Nphs1
9.89e-56FFCP PHASE2:Mm9::chr7:47891824..47891827,-#_101257dce07bd8430f10a0d4dbace910p@chr7:47891824..47891827, -
9.89e-56FFCP PHASE2:Mm9::chr10:50622895..50622905,+#_101257dce07bd8430f10a0d4dbace910p@chr10:50622895..50622905, +
9.89e-56FFCP PHASE1:Mm9::chr7:47891824..47891827,-#_101257dce07bd8430f10a0d4dbace910p@chr7:47891824..47891827, -
9.89e-56FFCP PHASE1:Mm9::chr10:50622895..50622905,+#_101257dce07bd8430f10a0d4dbace910p@chr10:50622895..50622905, +
9.89e-56FFCP PHASE2:Mm9::chr10:39251651..39251690,+#_101257dce07bd8430f10a0d4dbace910p@chr10:39251651..39251690, +
9.89e-56FFCP PHASE1:Mm9::chr8:118959620..118959632,-#_101257dce07bd8430f10a0d4dbace910p@chr8:118959620..118959632, -
9.89e-56FFCP PHASE1:Mm9::chr1:89952042..89952053,+#_101257dce07bd8430f10a0d4dbace910p2@LOC100048662, p2@LOC100048744, p2@Ugt1a10
9.89e-56FFCP PHASE2:Mm9::chr7:126785928..126785945,-#_101257dce07bd8430f10a0d4dbace910p3@uc009jll.1
9.89e-56FFCP PHASE2:Mm9::chr8:118959620..118959632,-#_101257dce07bd8430f10a0d4dbace910p@chr8:118959620..118959632, -
9.89e-56FFCP PHASE2:Mm9::chr10:51915118..51915138,-#_101257dce07bd8430f10a0d4dbace910p4@Ros1
9.89e-56FFCP PHASE2:Mm9::chr2:74971765..74971779,-#_101257dce07bd8430f10a0d4dbace910p@chr2:74971765..74971779, -
9.89e-56FFCP PHASE2:Mm9::chr5:5694436..5694447,-#_101257dce07bd8430f10a0d4dbace910p7@Steap2
9.89e-56FFCP PHASE2:Mm9::chr1:89952042..89952053,+#_101257dce07bd8430f10a0d4dbace910p2@LOC100048662, p2@LOC100048744, p2@Ugt1a10
9.89e-56FFCP PHASE1:Mm9::chr5:5694436..5694447,-#_101257dce07bd8430f10a0d4dbace910p7@Steap2
9.89e-56FFCP PHASE1:Mm9::chr7:31244771..31244782,+#_101257dce07bd8430f10a0d4dbace910p2@Nphs1
9.89e-56FFCP PHASE2:Mm9::chr10:79277411..79277429,+#_101257dce07bd8430f10a0d4dbace910p@chr10:79277411..79277429, +
9.89e-56FFCP PHASE1:Mm9::chr2:74971765..74971779,-#_101257dce07bd8430f10a0d4dbace910p@chr2:74971765..74971779, -
9.89e-56FFCP PHASE1:Mm9::chr10:39251651..39251690,+#_101257dce07bd8430f10a0d4dbace910p@chr10:39251651..39251690, +
9.89e-56FFCP PHASE1:Mm9::chr7:126785928..126785945,-#_101257dce07bd8430f10a0d4dbace910p3@uc009jll.1
9.89e-56FFCP PHASE1:Mm9::chr10:51915118..51915138,-#_101257dce07bd8430f10a0d4dbace910p4@Ros1
1.76e-55FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_926432e99b9ebd490edaf737aab5dda4p@chr18:3456189..3456200, +
1.76e-55FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_926432e99b9ebd490edaf737aab5dda4p@chr18:3456189..3456200, +
3.07e-55FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_d3ef84648b64305ed5b810da24e710d4p@chr9:119741711..119741743, -
3.07e-55FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_d3ef84648b64305ed5b810da24e710d4p@chr9:119741711..119741743, -
6.17e-52FFCP PHASE1:Mm9::chr11:75720190..75720216,-#_8319a7237a7b8d2aa7de0fbee97fe228p@chr11:75720190..75720216, -
6.17e-52FFCP PHASE2:Mm9::chr11:75720190..75720216,-#_8319a7237a7b8d2aa7de0fbee97fe228p@chr11:75720190..75720216, -
6.97e-52FFCP PHASE1:Mm9::chr13:108834249..108834299,+#_79ae85215f8135cc08bcde7b70e41ed8p3@2810008M24Rik
6.97e-52FFCP PHASE2:Mm9::chr13:108834249..108834299,+#_79ae85215f8135cc08bcde7b70e41ed8p3@2810008M24Rik
1.64e-51FFCP PHASE2:Mm9::chr2:74975548..74975563,-#_e00b29fe14b00f26f4424a90ea51e5f1p1@ENSMUST00000143898
1.64e-51FFCP PHASE1:Mm9::chr2:74975548..74975563,-#_e00b29fe14b00f26f4424a90ea51e5f1p1@ENSMUST00000143898
6.24e-51FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_19b262a54cb8a5fa789e374a9486abd0p@chr7:7606139..7606151, -
6.24e-51FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_19b262a54cb8a5fa789e374a9486abd0p@chr7:7606139..7606151, -
1.67e-50FFCP PHASE2:Mm9::chr3:96637141..96637180,+#_cc14d36adc94dffd2b4c1370dc5e2b43p4@Pdzk1
1.67e-50FFCP PHASE1:Mm9::chr3:96637141..96637180,+#_cc14d36adc94dffd2b4c1370dc5e2b43p4@Pdzk1
2.31e-50FFCP PHASE1:Mm9::chr13:98786159..98786170,-#_16b030068665bee5195987ee4300d747p8@Rgnef
2.31e-50FFCP PHASE2:Mm9::chr13:98786159..98786170,-#_16b030068665bee5195987ee4300d747p8@Rgnef
2.36e-50FFCP PHASE1:Mm9::chr16:88563303..88563315,-#_2971ce6ecb21374dd2eef38aebca5c5ap5@Cldn8
2.36e-50FFCP PHASE2:Mm9::chr16:88563303..88563315,-#_2971ce6ecb21374dd2eef38aebca5c5ap5@Cldn8
2.38e-50FFCP PHASE2:Mm9::chr7:126785968..126785980,-#_c38bc85de800cf28389299c0afc2e89ep2@uc009jll.1
2.38e-50FFCP PHASE1:Mm9::chr7:31244710..31244719,+#_c38bc85de800cf28389299c0afc2e89ep4@Nphs1
2.38e-50FFCP PHASE2:Mm9::chr3:154257229..154257241,-#_c38bc85de800cf28389299c0afc2e89ep@chr3:154257229..154257241, -
2.38e-50FFCP PHASE1:Mm9::chr7:126785968..126785980,-#_c38bc85de800cf28389299c0afc2e89ep2@uc009jll.1
2.38e-50FFCP PHASE2:Mm9::chr10:12353875..12353921,-#_c38bc85de800cf28389299c0afc2e89ep@chr10:12353875..12353921, -
2.38e-50FFCP PHASE1:Mm9::chr10:12353875..12353921,-#_c38bc85de800cf28389299c0afc2e89ep@chr10:12353875..12353921, -
2.38e-50FFCP PHASE2:Mm9::chr7:31244710..31244719,+#_c38bc85de800cf28389299c0afc2e89ep4@Nphs1
2.38e-50FFCP PHASE1:Mm9::chr3:154257229..154257241,-#_c38bc85de800cf28389299c0afc2e89ep@chr3:154257229..154257241, -
3.53e-50FFCP PHASE2:Mm9::chr10:3291584..3291599,+#_d30871ebd0e749efb1ab5c3d2648b4a9p@chr10:3291584..3291599, +
3.53e-50FFCP PHASE1:Mm9::chr10:3291584..3291599,+#_d30871ebd0e749efb1ab5c3d2648b4a9p@chr10:3291584..3291599, +
5.98e-50FFCP PHASE1:Mm9::chr17:34764056..34764069,-#_adb6062175b5eeb7a7e69fa8ac14c789p9@Ppt2
5.98e-50FFCP PHASE2:Mm9::chr17:34764056..34764069,-#_adb6062175b5eeb7a7e69fa8ac14c789p9@Ppt2
6.48e-50FFCP PHASE2:Mm9::chr4:107817557..107817589,-#_913e209efe254e8b2e437c8afaf3d8e6p5@Scp2
6.48e-50FFCP PHASE1:Mm9::chr4:107817557..107817589,-#_913e209efe254e8b2e437c8afaf3d8e6p5@Scp2
7.43e-50FFCP PHASE1:Mm9::chr2:74543235..74543246,+#_6e8fb03d5ca327541ddeb86534de8d16p7@Hoxd8
7.43e-50FFCP PHASE2:Mm9::chr2:74543235..74543246,+#_6e8fb03d5ca327541ddeb86534de8d16p7@Hoxd8
1.21e-49FFCP PHASE2:Mm9::chr2:74542882..74542894,+#_c36ea2f78b6167b2dd1011a0e8728c4dp10@Hoxd8
1.21e-49FFCP PHASE2:Mm9::chr16:26463232..26463247,+#_c36ea2f78b6167b2dd1011a0e8728c4dp3@Cldn16
1.21e-49FFCP PHASE1:Mm9::chr2:74971811..74971824,-#_c36ea2f78b6167b2dd1011a0e8728c4dp@chr2:74971811..74971824, -
1.21e-49FFCP PHASE1:Mm9::chr14:71030002..71030013,-#_c36ea2f78b6167b2dd1011a0e8728c4dp14@Epb4.9

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