CL:0000083: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000083
|name=epithelial cell of pancreas
|namespace=cell
|def="An epithelial cell of the pancreas." [GOC:tfm]
|xref=BTO:0000028
|is_a=CL:0000066;;CL:0002371...") |
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{{CL | {{CL | ||
|id=CL:0000083 | |id=CL:0000083 | ||
|name= | |name=exocrine pancreas cell | ||
|namespace= | |namespace=efo | ||
|def="An epithelial cell of the pancreas." [GOC:tfm] | |def="An epithelial cell of the pancreas." [GOC:tfm] | ||
|xref=BTO:0000028 | |xref=BTO:0000028 | ||
|is_a=CL:0000066;;CL:0002371 | |is_a=CL:0000066;;CL:0002371;;EFO:0002966 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0001264 | |part_of=UBERON:0001264 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:36, 15 June 2012
| Name: | exocrine pancreas cell | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "An epithelial cell of the pancreas." [GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell),EFO:0002966() |
|---|---|
| develops_from: | CL:0000223(endodermal cell) |
| part_of: | UBERON:0001264(pancreas) |
Children
| is a: | FF:0000130 (pancreatic epithelial cell),CL:0000169 (type B pancreatic cell),CL:0000173 (pancreatic D cell),FF:0100304 (PANC-1 cell),FF:0101521 (pancreatic adenocarcinoma cell line),FF:10438-106E6 (ductal cell carcinoma cell line:KLM-1),FF:10488-107B2 (ductal cell carcinoma cell line:MIA Paca2),FF:10531-107F9 (),FF:10543-107H3 (),FF:10797-110I5 (tubular adenocarcinoma cell line:SUIT-2) |
|---|---|
| derives from: | FF:0103533 (NOR-P1 cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10438-106E6 (ductal cell carcinoma cell line:KLM-1)
- 10488-107B2 (ductal cell carcinoma cell line:MIA Paca2)
- 10489-107B3
- 10531-107F9
- 10542-107H2
- 10543-107H3
- 10698-109G5 (pancreatic carcinoma cell line:NOR-P1)
- 10797-110I5 (tubular adenocarcinoma cell line:SUIT-2)
Mouse (Mus musculus)
- 10438-106E6 (ductal cell carcinoma cell line:KLM-1)
- 10488-107B2 (ductal cell carcinoma cell line:MIA Paca2)
- 10489-107B3
- 10531-107F9
- 10542-107H2
- 10543-107H3
- 10698-109G5 (pancreatic carcinoma cell line:NOR-P1)
- 10797-110I5 (tubular adenocarcinoma cell line:SUIT-2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000083 (exocrine pancreas cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.67e-66 | FFCP PHASE2:Hg19::chr16:57945799..57945809,-#_fca9ef317a80a34a0161fdd8e13f7cb3 | p@chr16:57945799..57945809, - |
| 4.67e-66 | FFCP PHASE1:Hg19::chr16:57945799..57945809,-#_fca9ef317a80a34a0161fdd8e13f7cb3 | p@chr16:57945799..57945809, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:98779728..98779733,-#_6230535f48d35cc1645301e0abf2b21b | p@chr1:98779728..98779733, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:196278365..196278367,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:196278365..196278367, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:57529719..57529726,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529719..57529726, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:45928212..45928215,+#_6230535f48d35cc1645301e0abf2b21b | p14@IGFBP1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:27707697..27707707,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:27707697..27707707, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:79954988..79954992,-#_6230535f48d35cc1645301e0abf2b21b | p@chr12:79954988..79954992, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:78001338..78001348,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:78001338..78001348, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:83659759..83659783,-#_6230535f48d35cc1645301e0abf2b21b | p@chr3:83659759..83659783, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:139757287..139757309,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139757287..139757309, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:113425862..113425864,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:113425862..113425864, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:65144695..65144697,-#_6230535f48d35cc1645301e0abf2b21b | p@chr11:65144695..65144697, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:189151408..189151415,+#_6230535f48d35cc1645301e0abf2b21b | p@chr3:189151408..189151415, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:81224883..81224888,+#_6230535f48d35cc1645301e0abf2b21b | p@chr4:81224883..81224888, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:57529651..57529657,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529651..57529657, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:139791292..139791303,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139791292..139791303, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:114885416..114885423,+#_6230535f48d35cc1645301e0abf2b21b | p@chr10:114885416..114885423, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:114004420..114004422,-#_6230535f48d35cc1645301e0abf2b21b | p@chr2:114004420..114004422, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:165990105..165990115,-#_6230535f48d35cc1645301e0abf2b21b | p10@PDE10A |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:98850479..98850511,-#_6230535f48d35cc1645301e0abf2b21b | p@chr1:98850479..98850511, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:1128952..1128957,+#_6230535f48d35cc1645301e0abf2b21b | p4@SSTR5 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:41052616..41052617,-#_6230535f48d35cc1645301e0abf2b21b | p@chr8:41052616..41052617, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:126468524..126468553,+#_6230535f48d35cc1645301e0abf2b21b | p3@ENST00000430692 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:38059452..38059455,-#_6230535f48d35cc1645301e0abf2b21b | p@chr9:38059452..38059455, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:58533857..58533867,-#_6230535f48d35cc1645301e0abf2b21b | p@chr20:58533857..58533867, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:1128952..1128957,+#_6230535f48d35cc1645301e0abf2b21b | p4@SSTR5 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:163063326..163063330,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:163063326..163063330, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:139791188..139791193,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139791188..139791193, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:196278203..196278206,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:196278203..196278206, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:57529696..57529706,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529696..57529706, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:109605568..109605573,-#_6230535f48d35cc1645301e0abf2b21b | p6@EDAR |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:163063326..163063330,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:163063326..163063330, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:13895146..13895156,+#_6230535f48d35cc1645301e0abf2b21b | p@chr11:13895146..13895156, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:42980646..42980651,+#_6230535f48d35cc1645301e0abf2b21b | p@chr20:42980646..42980651, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:98779728..98779733,-#_6230535f48d35cc1645301e0abf2b21b | p@chr1:98779728..98779733, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:165990158..165990169,-#_6230535f48d35cc1645301e0abf2b21b | p12@PDE10A |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:162724324..162724330,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:162724324..162724330, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:1129001..1129004,+#_6230535f48d35cc1645301e0abf2b21b | p6@SSTR5 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:78001338..78001348,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:78001338..78001348, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:1129001..1129004,+#_6230535f48d35cc1645301e0abf2b21b | p6@SSTR5 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:83659759..83659783,-#_6230535f48d35cc1645301e0abf2b21b | p@chr3:83659759..83659783, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:139757287..139757309,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139757287..139757309, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:162724324..162724330,+#_6230535f48d35cc1645301e0abf2b21b | p@chr1:162724324..162724330, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:189028187..189028196,+#_6230535f48d35cc1645301e0abf2b21b | p@chr3:189028187..189028196, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:113425862..113425864,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:113425862..113425864, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:65144695..65144697,-#_6230535f48d35cc1645301e0abf2b21b | p@chr11:65144695..65144697, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:189151408..189151415,+#_6230535f48d35cc1645301e0abf2b21b | p@chr3:189151408..189151415, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:57529651..57529657,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529651..57529657, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:196278365..196278367,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:196278365..196278367, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:2409216..2409225,-#_6230535f48d35cc1645301e0abf2b21b | p@chr18:2409216..2409225, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:57529719..57529726,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529719..57529726, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:165990105..165990115,-#_6230535f48d35cc1645301e0abf2b21b | p10@PDE10A |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:45928212..45928215,+#_6230535f48d35cc1645301e0abf2b21b | p14@IGFBP1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:27707697..27707707,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:27707697..27707707, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:41052616..41052617,-#_6230535f48d35cc1645301e0abf2b21b | p@chr8:41052616..41052617, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:126468524..126468553,+#_6230535f48d35cc1645301e0abf2b21b | p3@ENST00000430692 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:79954988..79954992,-#_6230535f48d35cc1645301e0abf2b21b | p@chr12:79954988..79954992, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:98850479..98850511,-#_6230535f48d35cc1645301e0abf2b21b | p@chr1:98850479..98850511, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:38059452..38059455,-#_6230535f48d35cc1645301e0abf2b21b | p@chr9:38059452..38059455, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:58533857..58533867,-#_6230535f48d35cc1645301e0abf2b21b | p@chr20:58533857..58533867, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:2409216..2409225,-#_6230535f48d35cc1645301e0abf2b21b | p@chr18:2409216..2409225, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:139791188..139791193,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139791188..139791193, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:114885416..114885423,+#_6230535f48d35cc1645301e0abf2b21b | p@chr10:114885416..114885423, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:81224883..81224888,+#_6230535f48d35cc1645301e0abf2b21b | p@chr4:81224883..81224888, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:139791292..139791303,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:139791292..139791303, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:109605568..109605573,-#_6230535f48d35cc1645301e0abf2b21b | p6@EDAR |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:13895146..13895156,+#_6230535f48d35cc1645301e0abf2b21b | p@chr11:13895146..13895156, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:196278203..196278206,+#_6230535f48d35cc1645301e0abf2b21b | p@chr2:196278203..196278206, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:57529696..57529706,+#_6230535f48d35cc1645301e0abf2b21b | p@chr5:57529696..57529706, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:114004420..114004422,-#_6230535f48d35cc1645301e0abf2b21b | p@chr2:114004420..114004422, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:42980646..42980651,+#_6230535f48d35cc1645301e0abf2b21b | p@chr20:42980646..42980651, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:165990158..165990169,-#_6230535f48d35cc1645301e0abf2b21b | p12@PDE10A |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:189028187..189028196,+#_6230535f48d35cc1645301e0abf2b21b | p@chr3:189028187..189028196, + |
| 4.94e-40 | FFCP PHASE2:Hg19::chr20:42780550..42780563,+#_5a2f9fab40a45219269d16e1620e477d | p@chr20:42780550..42780563, + |
| 4.94e-40 | FFCP PHASE1:Hg19::chr20:42780550..42780563,+#_5a2f9fab40a45219269d16e1620e477d | p@chr20:42780550..42780563, + |
| 9.88e-34 | FFCP PHASE2:Hg19::chr2:71277301..71277315,+#_78d161595d588afc56a9f39e6e004e00 | p@chr2:71277301..71277315, + |
| 9.88e-34 | FFCP PHASE2:Hg19::chr3:133174860..133174888,-#_78d161595d588afc56a9f39e6e004e00 | p1@ENST00000515542, p1@uc003epo.2 |
| 9.88e-34 | FFCP PHASE1:Hg19::chr2:71277301..71277315,+#_78d161595d588afc56a9f39e6e004e00 | p@chr2:71277301..71277315, + |
| 9.88e-34 | FFCP PHASE1:Hg19::chr3:133174860..133174888,-#_78d161595d588afc56a9f39e6e004e00 | p1@ENST00000515542, p1@uc003epo.2 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr3:189128229..189128239,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr3:189128229..189128239, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr2:139791209..139791219,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr2:139791209..139791219, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr10:4007246..4007251,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr10:4007246..4007251, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:141766141..141766182,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr5:141766141..141766182, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr12:71771004..71771010,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr12:71771004..71771010, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr15:35795980..35795985,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr15:35795980..35795985, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr19:54274746..54274752,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr19:54274746..54274752, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr13:63967430..63967434,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr13:63967430..63967434, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr12:78224442..78224455,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p26@NAV3 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr13:99405077..99405084,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p5@SLC15A1 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr21:36216696..36216726,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr21:36216696..36216726, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr19:15162579..15162588,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p5@CASP14 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr19:54274746..54274752,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr19:54274746..54274752, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr11:119056147..119056152,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p3@PDZD3 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr11:2314912..2314928,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr11:2314912..2314928, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr6:169691363..169691375, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:78949005..78949024,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr9:78949005..78949024, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr19:15162579..15162588,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p5@CASP14 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr19:10311868..10311875,-#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr19:10311868..10311875, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr3:189128229..189128239,+#_52fbafc5d72d178d3db1edb1bcc870f1 | p@chr3:189128229..189128239, + |
