Personal tools

CL:0000199: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000199 |name=mechanoreceptor cell |namespace=cell |def="A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous...")
 
No edit summary
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:36, 15 June 2012

Name:mechanoreceptor cell
Namespace:cell
Definition:"A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [MESH:A.08.800.550.700.500]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000006(neuronal receptor cell)



Children


is a:CL:0000855 (sensory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000199 (mechanoreceptor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
2.74e-44FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_1144a0c613541f30449e34f02cb67b7cp@chr1:172843796..172843799, -
2.74e-44FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_1144a0c613541f30449e34f02cb67b7cp@chr5:147854240..147854249, -
2.74e-44FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_1144a0c613541f30449e34f02cb67b7cp@chr1:172843796..172843799, -
2.74e-44FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_1144a0c613541f30449e34f02cb67b7cp@chr11:11599532..11599539, -
2.74e-44FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_1144a0c613541f30449e34f02cb67b7cp@chr6:86746562..86746579, -
2.74e-44FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_1144a0c613541f30449e34f02cb67b7cp@chr15:97806034..97806061, +
2.74e-44FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_1144a0c613541f30449e34f02cb67b7cp@chr4:133802857..133802884, +
2.74e-44FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_1144a0c613541f30449e34f02cb67b7cp@chr14:31283085..31283097, -
2.74e-44FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_1144a0c613541f30449e34f02cb67b7cp2@Strc
2.74e-44FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_1144a0c613541f30449e34f02cb67b7cp@chr3:58626291..58626298, -
2.74e-44FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_1144a0c613541f30449e34f02cb67b7cp@chr12:13572961..13572974, +
2.74e-44FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_1144a0c613541f30449e34f02cb67b7cp1@Tmc1
2.74e-44FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_1144a0c613541f30449e34f02cb67b7cp@chr16:93971357..93971363, -
2.74e-44FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_1144a0c613541f30449e34f02cb67b7cp@chr13:58283583..58283607, -
2.74e-44FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_1144a0c613541f30449e34f02cb67b7cp@chr2:53464178..53464186, +
2.74e-44FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:3909310..3909321, +
2.74e-44FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_1144a0c613541f30449e34f02cb67b7cp10@Otof
2.74e-44FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_1144a0c613541f30449e34f02cb67b7cp@chr3:154693281..154693317, -
2.74e-44FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_1144a0c613541f30449e34f02cb67b7cp@chr11:89702580..89702593, -
2.74e-44FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_1144a0c613541f30449e34f02cb67b7cp2@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_1144a0c613541f30449e34f02cb67b7cp21@Espn
2.74e-44FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_1144a0c613541f30449e34f02cb67b7cp@chr12:13508046..13508055, +
2.74e-44FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_1144a0c613541f30449e34f02cb67b7cp@chr11:94371127..94371139, -
2.74e-44FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_1144a0c613541f30449e34f02cb67b7cp2@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_1144a0c613541f30449e34f02cb67b7cp@chr2:53464178..53464186, +
2.74e-44FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:78257454..78257465, +
2.74e-44FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_1144a0c613541f30449e34f02cb67b7cp3@Kncn
2.74e-44FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:78523144..78523177, +
2.74e-44FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_1144a0c613541f30449e34f02cb67b7cp12@B3galt5
2.74e-44FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_1144a0c613541f30449e34f02cb67b7cp3@Kncn
2.74e-44FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_1144a0c613541f30449e34f02cb67b7cp@chr15:89215319..89215330, +
2.74e-44FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_1144a0c613541f30449e34f02cb67b7cp4@Chrna10
2.74e-44FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_1144a0c613541f30449e34f02cb67b7cp@chr10:67371994..67372010, +
2.74e-44FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:78257454..78257465, +
2.74e-44FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:182528371..182528385, +
2.74e-44FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_1144a0c613541f30449e34f02cb67b7cp2@Fscn2
2.74e-44FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_1144a0c613541f30449e34f02cb67b7cp@chr3:154459231..154459240, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000199&oldid=1833562"