CL:0000342: Difference between revisions
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|id=CL:0000342
|name=pigment cell (sensu Vertebrata)
|namespace=cell
|def="Any animal cell containing pigment granules." [GOC:tfm, ISBN:0721662544]
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|is_a=CL:...") |
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Revision as of 17:37, 15 June 2012
| Name: | pigment cell (sensu Vertebrata) |
|---|---|
| Namespace: | cell |
| Definition: | "Any animal cell containing pigment granules." [GOC:tfm, ISBN:0721662544] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000147(pigment cell) |
|---|
Children
| is a: | CL:0002565 (iris pigment epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Mouse (Mus musculus)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000342 (pigment cell (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:71583868..71583874,-#_27d39cdf0cb0790a5feae026d4f4e494 | p@chr15:71583868..71583874, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:71583868..71583874,-#_27d39cdf0cb0790a5feae026d4f4e494 | p@chr15:71583868..71583874, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_5d2055a32069799bc7ee769e128be522 | p@chr5:78112479..78112482, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_5d2055a32069799bc7ee769e128be522 | p@chr5:78112479..78112482, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:74495062..74495063,-#_d5902c8d1bf97dffbeaa38854258869c | p13@STRA6 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:74495062..74495063,-#_d5902c8d1bf97dffbeaa38854258869c | p13@STRA6 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr22:50667406..50667412,+#_977f032101d6121fcfcb26ee2408a88b | p@chr22:50667406..50667412, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:50667406..50667412,+#_977f032101d6121fcfcb26ee2408a88b | p@chr22:50667406..50667412, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:53853688..53853698,-#_8b016c87a1de5c88ad58a7060c73bb02 | p3@BC033145 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:53853688..53853698,-#_8b016c87a1de5c88ad58a7060c73bb02 | p3@BC033145 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_34cf3355b2e7a2547af23d1c8c0ea5a6 | p@chr7:115723897..115723915, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_34cf3355b2e7a2547af23d1c8c0ea5a6 | p@chr7:115723897..115723915, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr14:100847969..100847980,+#_2192270109af71b469a39f10e12d4ba1 | p6@WDR25 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr14:100847969..100847980,+#_2192270109af71b469a39f10e12d4ba1 | p6@WDR25 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_6136e6b3ed132b87d0f72044ae3431a4 | p@chr2:35680607..35680613, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_6136e6b3ed132b87d0f72044ae3431a4 | p@chr7:131803806..131803815, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_6136e6b3ed132b87d0f72044ae3431a4 | p@chr7:131803806..131803815, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_6136e6b3ed132b87d0f72044ae3431a4 | p@chr2:35680607..35680613, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_d40e8f249c9318692495c8587799f716 | p@chr7:115723925..115723935, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_d40e8f249c9318692495c8587799f716 | p@chr7:115723925..115723935, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_d40e8f249c9318692495c8587799f716 | p@chrX:106198807..106198826, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_d40e8f249c9318692495c8587799f716 | p@chrX:106198807..106198826, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr5:34728676..34728679,+#_04262bfcb5694ab0c3fd99ce63362af2 | p26@RAI14 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr5:34728676..34728679,+#_04262bfcb5694ab0c3fd99ce63362af2 | p26@RAI14 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr15:41062022..41062028,+#_c0dc37af1012654371ba7480a70508a8 | p3@C15orf62 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr15:41062022..41062028,+#_c0dc37af1012654371ba7480a70508a8 | p3@C15orf62 |
| 3.3e-40 | FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_a94887f6dadbd546de76679573d28928 | p@chr3:98671855..98671858, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_a94887f6dadbd546de76679573d28928 | p@chr3:98671855..98671858, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr1:94583454..94583465,-#_a94887f6dadbd546de76679573d28928 | p@chr1:94583454..94583465, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr4:88447806..88447810,+#_a94887f6dadbd546de76679573d28928 | p@chr4:88447806..88447810, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr4:88447806..88447810,+#_a94887f6dadbd546de76679573d28928 | p@chr4:88447806..88447810, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr1:94583454..94583465,-#_a94887f6dadbd546de76679573d28928 | p@chr1:94583454..94583465, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr16:80552480..80552487,-#_a94887f6dadbd546de76679573d28928 | p@chr16:80552480..80552487, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr16:80552480..80552487,-#_a94887f6dadbd546de76679573d28928 | p@chr16:80552480..80552487, - |
| 2.58e-34 | FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_a61a0cefa0f306e9045c59b5ee201bbf | p@chr11:31667372..31667383, - |
| 2.58e-34 | FFCP PHASE2:Hg19::chr3:98672197..98672201,+#_a61a0cefa0f306e9045c59b5ee201bbf | p@chr3:98672197..98672201, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr3:98672197..98672201,+#_a61a0cefa0f306e9045c59b5ee201bbf | p@chr3:98672197..98672201, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_a61a0cefa0f306e9045c59b5ee201bbf | p@chr11:31667372..31667383, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_7354ca0c53fd5e4090b44a72fc514694 | p3@NOX5 |
| 3.61e-34 | FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_7354ca0c53fd5e4090b44a72fc514694 | p3@NOX5 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr14:61929802..61929817,+#_f41c82663f1a6f40da2a084bae4c0a18 | p35@PRKCH |
| 7.06e-34 | FFCP PHASE1:Hg19::chr1:8938123..8938135,-#_f41c82663f1a6f40da2a084bae4c0a18 | p3@ENO1-IT1 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr1:8938123..8938135,-#_f41c82663f1a6f40da2a084bae4c0a18 | p3@ENO1-IT1 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr14:85705824..85705844,-#_f41c82663f1a6f40da2a084bae4c0a18 | p1@ENST00000556016 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr14:61929802..61929817,+#_f41c82663f1a6f40da2a084bae4c0a18 | p35@PRKCH |
| 7.06e-34 | FFCP PHASE2:Hg19::chr14:85705824..85705844,-#_f41c82663f1a6f40da2a084bae4c0a18 | p1@ENST00000556016 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_9c90d5865359b1d382234c0b60067fe4 | p1@BC033145 |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_9c90d5865359b1d382234c0b60067fe4 | p1@BC033145 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr9:75489043..75489052,-#_7cfcb9ed7b8509b16d65f4c0cb4b2fe8 | p1@ENST00000453787 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr9:75489043..75489052,-#_7cfcb9ed7b8509b16d65f4c0cb4b2fe8 | p1@ENST00000453787 |
| 1.33e-29 | FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_460203b2aadab4cbbda86c6892da8422 | p16@HECW1 |
| 1.33e-29 | FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_460203b2aadab4cbbda86c6892da8422 | p16@HECW1 |
| 2.37e-29 | FFCP PHASE1:Hg19::chr21:16374688..16374703,-#_e671cc2b77215357cbb30409d0af39db | p6@NRIP1 |
| 2.37e-29 | FFCP PHASE2:Hg19::chr21:16374688..16374703,-#_e671cc2b77215357cbb30409d0af39db | p6@NRIP1 |
| 3.16e-29 | FFCP PHASE1:Hg19::chr10:91043389..91043400,+#_8a4e4caaf7559902737d2a12622a6253 | p3@ENST00000444849 |
| 3.16e-29 | FFCP PHASE1:Hg19::chr7:151433200..151433217,-#_8a4e4caaf7559902737d2a12622a6253 | p31@PRKAG2 |
| 3.16e-29 | FFCP PHASE2:Hg19::chr7:151433200..151433217,-#_8a4e4caaf7559902737d2a12622a6253 | p31@PRKAG2 |
| 3.16e-29 | FFCP PHASE2:Hg19::chr10:91043389..91043400,+#_8a4e4caaf7559902737d2a12622a6253 | p3@ENST00000444849 |
| 4.2e-29 | FFCP PHASE2:Hg19::chr12:13025302..13025313,+#_f9c75d97a661b303fa82b777d07aa77c | p@chr12:13025302..13025313, + |
| 4.2e-29 | FFCP PHASE1:Hg19::chr12:13025302..13025313,+#_f9c75d97a661b303fa82b777d07aa77c | p@chr12:13025302..13025313, + |
| 5.93e-26 | FFCP PHASE2:Hg19::chr6:125540724..125540736,+#_1aba9ec3de298396d1e87ebeb3c93d77 | p12@TPD52L1 |
| 5.93e-26 | FFCP PHASE1:Hg19::chr6:125540724..125540736,+#_1aba9ec3de298396d1e87ebeb3c93d77 | p12@TPD52L1 |
| 9.79e-26 | FFCP PHASE2:Hg19::chr21:41160614..41160621,+#_920f2a8cd600e76782241ca5687ab338 | p@chr21:41160614..41160621, + |
| 9.79e-26 | FFCP PHASE1:Hg19::chr21:41160614..41160621,+#_920f2a8cd600e76782241ca5687ab338 | p@chr21:41160614..41160621, + |
| 2.1e-23 | FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_63b39dbfe4456d9c3129fbfcb0ad0143 | p20@PRKCH |
| 2.1e-23 | FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_63b39dbfe4456d9c3129fbfcb0ad0143 | p20@PRKCH |
| 4.1e-23 | FFCP PHASE1:Hg19::chr2:16804394..16804406,-#_e20568c4fbae8ad78b24ae61344a8f0c | p6@FAM49A |
| 4.1e-23 | FFCP PHASE2:Hg19::chr2:16804394..16804406,-#_e20568c4fbae8ad78b24ae61344a8f0c | p6@FAM49A |
| 1.88e-21 | FFCP PHASE2:Hg19::chr3:55002159..55002164,+#_ae9cd99c516ff5f5c88c29a98fef5e54 | p@chr3:55002159..55002164, + |
| 1.88e-21 | FFCP PHASE1:Hg19::chr3:55002159..55002164,+#_ae9cd99c516ff5f5c88c29a98fef5e54 | p@chr3:55002159..55002164, + |
| 4.22e-21 | FFCP PHASE1:Hg19::chr21:16374660..16374679,-#_c1c83446771d75a233e9413dbe11bd2a | p4@NRIP1 |
| 4.22e-21 | FFCP PHASE2:Hg19::chr21:16374660..16374679,-#_c1c83446771d75a233e9413dbe11bd2a | p4@NRIP1 |
| 6.31e-21 | FFCP PHASE1:Hg19::chr8:145011875..145011879,+#_cc9e4ed4c5bb0caeff55939ad83179ac | p@chr8:145011875..145011879, + |
| 6.31e-21 | FFCP PHASE2:Hg19::chr8:145011875..145011879,+#_cc9e4ed4c5bb0caeff55939ad83179ac | p@chr8:145011875..145011879, + |
| 6.31e-21 | FFCP PHASE2:Hg19::chr10:91043499..91043510,+#_cc9e4ed4c5bb0caeff55939ad83179ac | p2@ENST00000354541 |
| 6.31e-21 | FFCP PHASE1:Hg19::chr10:91043499..91043510,+#_cc9e4ed4c5bb0caeff55939ad83179ac | p2@ENST00000354541 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr15:67524744..67524745,+#_edf666ea732d341938168e4ae06585fb | p1@ENST00000497294 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr11:31014065..31014073,-#_edf666ea732d341938168e4ae06585fb | p1@DCDC5 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_edf666ea732d341938168e4ae06585fb | p@chr8:124692287..124692298, + |
| 7.72e-21 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_edf666ea732d341938168e4ae06585fb | p@chr8:124692287..124692298, + |
| 7.72e-21 | FFCP PHASE2:Hg19::chr15:67524744..67524745,+#_edf666ea732d341938168e4ae06585fb | p1@ENST00000497294 |
| 7.72e-21 | FFCP PHASE2:Hg19::chr11:31014065..31014073,-#_edf666ea732d341938168e4ae06585fb | p1@DCDC5 |
| 9.43e-21 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_c67b29bb8408777b9bd2c364a504c8aa | p1@CLRN1 |
| 9.43e-21 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_c67b29bb8408777b9bd2c364a504c8aa | p1@CLRN1 |
| 1.3e-19 | FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_868991654ca229defb99d9da7fe0cc7e | p@chr14:87636652..87636657, - |
| 1.3e-19 | FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_868991654ca229defb99d9da7fe0cc7e | p@chr14:87636652..87636657, - |
| 2.25e-19 | FFCP PHASE1:Hg19::chr14:61929781..61929801,+#_0680145bd2dadfaed206c18f487fa116 | p27@PRKCH |
| 2.25e-19 | FFCP PHASE2:Hg19::chr14:61929781..61929801,+#_0680145bd2dadfaed206c18f487fa116 | p27@PRKCH |
| 3.25e-19 | FFCP PHASE1:Hg19::chr3:147131290..147131301,+#_f9d6cb70c89cd68e4de7fcd5c513525d | p@chr3:147131290..147131301, + |
| 3.25e-19 | FFCP PHASE1:Hg19::chrX:106243285..106243290,-#_f9d6cb70c89cd68e4de7fcd5c513525d | p8@MORC4 |
| 3.25e-19 | FFCP PHASE2:Hg19::chrX:106243285..106243290,-#_f9d6cb70c89cd68e4de7fcd5c513525d | p8@MORC4 |
| 3.25e-19 | FFCP PHASE2:Hg19::chr3:147131290..147131301,+#_f9d6cb70c89cd68e4de7fcd5c513525d | p@chr3:147131290..147131301, + |
| 3.91e-19 | FFCP PHASE2:Hg19::chr14:62037117..62037132,+#_0b0669206c63c339d05cf478db6ca091 | p7@FLJ22447 |
| 3.91e-19 | FFCP PHASE1:Hg19::chr14:62037117..62037132,+#_0b0669206c63c339d05cf478db6ca091 | p7@FLJ22447 |
| 4.44e-18 | FFCP PHASE2:Hg19::chr4:150666211..150666212,+#_657cb7197bfdc953229d171fb5171016 | p@chr4:150666211..150666212, + |
| 4.44e-18 | FFCP PHASE1:Hg19::chr4:150666211..150666212,+#_657cb7197bfdc953229d171fb5171016 | p@chr4:150666211..150666212, + |
| 5.26e-18 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_1353446153273a3a904b446e84406db7 | p7@PTPRU |
| 5.26e-18 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_1353446153273a3a904b446e84406db7 | p7@PTPRU |
| 6.23e-18 | FFCP PHASE2:Hg19::chr5:138852090..138852095,+#_1f7971fe107e94d58c178087c148a498 | p@chr5:138852090..138852095, + |
| 6.23e-18 | FFCP PHASE1:Hg19::chr5:138852090..138852095,+#_1f7971fe107e94d58c178087c148a498 | p@chr5:138852090..138852095, + |
