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CL:0000842: Difference between revisions

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(Created page with "{{CL |id=CL:0000842 |name=mononuclear cell |namespace=cell |def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add] |xref=BTO:0000878;;FMA:867...")
 
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|id=CL:0000842
|id=CL:0000842
|name=mononuclear cell
|name=mononuclear cell
|namespace=cell
|namespace=efo
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
|xref=BTO:0000878;;FMA:86713
|xref=BTO:0000878;;FMA:86713
|is_a=CL:0000224;;CL:0002087
|is_a=CL:0000224;;CL:0000738;;CL:0002087
|synonym="Peripheral blood mononuclear cell" NARROW []
|synonym="peripheral blood mononuclear cell" NARROW []
|comment=
|comment=
|alt_id=
|alt_id=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:39, 15 June 2012

Name:mononuclear cell
Namespace:efo
Definition:"A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
Xrefs:
links:

BTO:0000878

FMA:86713
Synonyms: "peripheral blood mononuclear cell" NARROW []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000224(),CL:0000738(leukocyte),CL:0002087(nongranular leukocyte)



Children


derives from:FF:0000135 (human peripheral blood mononuclear cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
  • 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
  • 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)

Mouse (Mus musculus)

  • 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
  • 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
  • 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000842 (mononuclear cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data