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UBERON:0000056: Difference between revisions

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|name=ureter
|name=ureter
|namespace=
|namespace=
|def="The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.[GO]. Muscular duct that propels urine from the kidneys to the urinary bladder, or related organs. In humans, organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters." [GO:0090189, Wikipedia:Ureter]
|def="Muscular duct that propels urine from the kidneys to the urinary bladder, or related organs. In humans, organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: the right and the left ureters." [FMA:9704, GO:0090189, Wikipedia:Ureter]
|xref=AAO:0010254;;BTO:0001409;;EFO:0000930;;EHDAA:9341;;EHDAA2:0002139;;EMAPA:17950;;EV:0100097;;FMA:9704;;GAID:438;;galen:Ureter;;http://upload.wikimedia.org/wikipedia/commons/thumb/3/30/Urinary_system.svg/200px-Urinary_system.svg.png;;MA:0000378;;MAT:0000120;;MESH:A.05.810.776;;MIAA:0000120;;ncithesaurus:Ureter;;OpenCyc:Mx4rvhmm6JwpEbGdrcN5Y29ycA;;SCTID:302511008;;VHOG:0000605;;XAO:0000144
|xref=AAO:0010254;;BTO:0001409;;EFO:0000930;;EHDAA2:0002139;;EHDAA:9341;;EMAPA:17950;;EV:0100097;;FMA:9704;;GAID:438;;galen:Ureter;;http://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/3/30/Urinary_system.svg/200px-Urinary_system.svg.png;;MA:0000378;;MAT:0000120;;MESH:A.05.810.776;;MIAA:0000120;;ncithesaurus:Ureter;;OpenCyc:Mx4rvhmm6JwpEbGdrcN5Y29ycA;;SCTID:302511008;;VHOG:0000605;;XAO:0000144
|is_a=UBERON:0000025;;UBERON:0000062;;UBERON:0004120;;UBERON:0005179;;UBERON:0006555
|is_a=UBERON:0004120;;UBERON:0005179;;UBERON:0006555
|synonym="metanephric duct" RELATED [ISBN10:0073040584, VHOG:0000605]
|synonym="metanephric duct" RELATED [ISBN10:0073040584, VHOG:0000605]
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=major_organ;;organ_slim;;uberon_slim
|subset=major_organ;;organ_slim;;uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0005081
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0001008;;UBERON:0002355
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical structure consisting of long narrow duct which carries urine from the kidney to the urinary bladder.[AAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 16:55, 26 June 2012

Name:ureter
Definition:"Muscular duct that propels urine from the kidneys to the urinary bladder, or related organs. In humans, organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: the right and the left ureters." [FMA:9704, GO:0090189, Wikipedia:Ureter]
Xrefs:
links:

AAO:0010254
BTO:0001409
EFO:0000930
EHDAA2:0002139
EHDAA:9341
EMAPA:17950
EV:0100097
FMA:9704
GAID:438
galen:Ureter
[1]
[ 200px-Urinary_system.svg.png 200px-Urinary_system.svg.png]
MA:0000378
MAT:0000120
MESH:A.05.810.776
MIAA:0000120
ncithesaurus:Ureter
OpenCyc:Mx4rvhmm6JwpEbGdrcN5Y29ycA
SCTID:302511008
VHOG:0000605

XAO:0000144
Synonyms: "metanephric duct" RELATED [ISBN10:0073040584, VHOG:0000605]
Subset: major_organ
organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005179(pelvis organ),UBERON:0006555(excretory tube)



Children

is a:FF:0011180 (Ureter)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000056 (ureter), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure consisting of long narrow duct which carries urine from the kidney to the urinary bladder.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.