UBERON:0003457: Difference between revisions
From FANTOM5_SSTAR
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|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 17:03, 26 June 2012
| Name: | head bone | ||
|---|---|---|---|
| Definition: | "A bone that is part of a head [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult head bone" EXACT [OBOL:automatic] "adult head bone organ" EXACT [OBOL:automatic] "bone of adult head" EXACT [OBOL:automatic] "bone of head" EXACT [OBOL:automatic] "bone organ of adult head" EXACT [OBOL:automatic] "bone organ of head" EXACT [OBOL:automatic] "head bone organ" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007914(head or neck bone) |
|---|
Children
| is a: | UBERON:0002397 (maxilla),UBERON:0003462 (facial bone),UBERON:0004766 (cranial bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003457 (head bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_053239a5c279b55de3cd36b9b14b37cb | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_053239a5c279b55de3cd36b9b14b37cb | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_a5461e78606393fc6e4c26b3fd452e96 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_a5461e78606393fc6e4c26b3fd452e96 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_a5461e78606393fc6e4c26b3fd452e96 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_a5461e78606393fc6e4c26b3fd452e96 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_a5461e78606393fc6e4c26b3fd452e96 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_a5461e78606393fc6e4c26b3fd452e96 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_a5461e78606393fc6e4c26b3fd452e96 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_a5461e78606393fc6e4c26b3fd452e96 | p12@C17orf67 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_df4e2f44fb501671f107a758dc1e06a1 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_df4e2f44fb501671f107a758dc1e06a1 | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_df4e2f44fb501671f107a758dc1e06a1 | p6@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_df4e2f44fb501671f107a758dc1e06a1 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_df4e2f44fb501671f107a758dc1e06a1 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_df4e2f44fb501671f107a758dc1e06a1 | p3@Epyc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_df4e2f44fb501671f107a758dc1e06a1 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_df4e2f44fb501671f107a758dc1e06a1 | p5@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_df4e2f44fb501671f107a758dc1e06a1 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_df4e2f44fb501671f107a758dc1e06a1 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_df4e2f44fb501671f107a758dc1e06a1 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:89702580..89702593, - |
