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|def="A bone that is part of a cranium." [UBERON:automatic]
|def="A bone that is part of a cranium." [UBERON:automatic]
|xref=SCTID:181792001
|xref=SCTID:181792001
|is_a=UBERON:0000032;;UBERON:0003457
|is_a=UBERON:0003457
|synonym="cranium bone" EXACT [UBERON:automatic]
|synonym="cranium bone" EXACT [UBERON:automatic]
|comment=
|comment=Note that here cranium = skull - mandible
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0003128
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:cranial bone
Definition:"A bone that is part of a cranium." [UBERON:automatic]
Xrefs:
links:
SCTID:181792001
Synonyms: "cranium bone" EXACT [UBERON:automatic]
Comments:Note that here cranium = skull - mandible

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003457(head bone)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004766 (cranial bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_393437a447275ec45333ee35d832e41dp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_393437a447275ec45333ee35d832e41dp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_393437a447275ec45333ee35d832e41dp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_393437a447275ec45333ee35d832e41dp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_393437a447275ec45333ee35d832e41dp4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_393437a447275ec45333ee35d832e41dp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_393437a447275ec45333ee35d832e41dp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_393437a447275ec45333ee35d832e41dp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_393437a447275ec45333ee35d832e41dp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_393437a447275ec45333ee35d832e41dp5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_393437a447275ec45333ee35d832e41dp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_393437a447275ec45333ee35d832e41dp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_393437a447275ec45333ee35d832e41dp2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_393437a447275ec45333ee35d832e41dp2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_393437a447275ec45333ee35d832e41dp2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_393437a447275ec45333ee35d832e41dp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_393437a447275ec45333ee35d832e41dp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_393437a447275ec45333ee35d832e41dp7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_393437a447275ec45333ee35d832e41dp2@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_393437a447275ec45333ee35d832e41dp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_393437a447275ec45333ee35d832e41dp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_393437a447275ec45333ee35d832e41dp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_393437a447275ec45333ee35d832e41dp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_393437a447275ec45333ee35d832e41dp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_393437a447275ec45333ee35d832e41dp2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_393437a447275ec45333ee35d832e41dp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_393437a447275ec45333ee35d832e41dp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_393437a447275ec45333ee35d832e41dp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_393437a447275ec45333ee35d832e41dp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_393437a447275ec45333ee35d832e41dp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_393437a447275ec45333ee35d832e41dp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_393437a447275ec45333ee35d832e41dp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_393437a447275ec45333ee35d832e41dp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_393437a447275ec45333ee35d832e41dp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_393437a447275ec45333ee35d832e41dp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_393437a447275ec45333ee35d832e41dp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_393437a447275ec45333ee35d832e41dp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_393437a447275ec45333ee35d832e41dp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_393437a447275ec45333ee35d832e41dp10@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_393437a447275ec45333ee35d832e41dp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_393437a447275ec45333ee35d832e41dp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_393437a447275ec45333ee35d832e41dp3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_393437a447275ec45333ee35d832e41dp2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_393437a447275ec45333ee35d832e41dp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_393437a447275ec45333ee35d832e41dp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_393437a447275ec45333ee35d832e41dp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_393437a447275ec45333ee35d832e41dp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_393437a447275ec45333ee35d832e41dp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_393437a447275ec45333ee35d832e41dp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_393437a447275ec45333ee35d832e41dp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_393437a447275ec45333ee35d832e41dp7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_393437a447275ec45333ee35d832e41dp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_393437a447275ec45333ee35d832e41dp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_393437a447275ec45333ee35d832e41dp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_393437a447275ec45333ee35d832e41dp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_393437a447275ec45333ee35d832e41dp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_393437a447275ec45333ee35d832e41dp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_393437a447275ec45333ee35d832e41dp2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_393437a447275ec45333ee35d832e41dp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_393437a447275ec45333ee35d832e41dp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_393437a447275ec45333ee35d832e41dp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_393437a447275ec45333ee35d832e41dp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_393437a447275ec45333ee35d832e41dp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_393437a447275ec45333ee35d832e41dp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_393437a447275ec45333ee35d832e41dp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_393437a447275ec45333ee35d832e41dp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_393437a447275ec45333ee35d832e41dp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_393437a447275ec45333ee35d832e41dp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_393437a447275ec45333ee35d832e41dp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_393437a447275ec45333ee35d832e41dp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_393437a447275ec45333ee35d832e41dp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_393437a447275ec45333ee35d832e41dp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_393437a447275ec45333ee35d832e41dp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_393437a447275ec45333ee35d832e41dp15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_393437a447275ec45333ee35d832e41dp41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_393437a447275ec45333ee35d832e41dp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_393437a447275ec45333ee35d832e41dp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_393437a447275ec45333ee35d832e41dp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_393437a447275ec45333ee35d832e41dp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_393437a447275ec45333ee35d832e41dp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_393437a447275ec45333ee35d832e41dp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_393437a447275ec45333ee35d832e41dp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_393437a447275ec45333ee35d832e41dp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_393437a447275ec45333ee35d832e41dp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_393437a447275ec45333ee35d832e41dp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_393437a447275ec45333ee35d832e41dp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_393437a447275ec45333ee35d832e41dp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_393437a447275ec45333ee35d832e41dp1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_393437a447275ec45333ee35d832e41dp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_393437a447275ec45333ee35d832e41dp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_393437a447275ec45333ee35d832e41dp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_393437a447275ec45333ee35d832e41dp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_393437a447275ec45333ee35d832e41dp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_393437a447275ec45333ee35d832e41dp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_393437a447275ec45333ee35d832e41dp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_393437a447275ec45333ee35d832e41dp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_393437a447275ec45333ee35d832e41dp2@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_393437a447275ec45333ee35d832e41dp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_393437a447275ec45333ee35d832e41dp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_393437a447275ec45333ee35d832e41dp@chr15:89215333..89215341, +

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