CL:0000123: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
Revision as of 17:24, 26 June 2012
| Name: | neuron associated cell (sensu Vertebrata) |
|---|---|
| Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000095(neuron associated cell) |
|---|
Children
| is a: | CL:0000242 (Merkel cell),CL:0000339 (glioblast (sensu Vertebrata)),CL:0002453 (oligodendrocyte precursor cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11497-119F3
- 11576-120F1
- 11577-120F2
- 11657-122F1
- 11658-122F2
Mouse (Mus musculus)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11497-119F3
- 11576-120F1
- 11577-120F2
- 11657-122F1
- 11658-122F2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000123 (neuron associated cell (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.33e-61 | FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_3fe21e07ac8fef1943cd57769bfc0454 | p@chr1:72873192..72873206, + |
| 8.33e-61 | FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_3fe21e07ac8fef1943cd57769bfc0454 | p@chr8:28132545..28132551, + |
| 8.33e-61 | FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_3fe21e07ac8fef1943cd57769bfc0454 | p@chr8:28132545..28132551, + |
| 8.33e-61 | FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_3fe21e07ac8fef1943cd57769bfc0454 | p@chr1:72873192..72873206, + |
| 1.74e-53 | FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_ca8763ff3d7577e6071a4da739859414 | p14@Slc3a2 |
| 1.74e-53 | FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_ca8763ff3d7577e6071a4da739859414 | p14@Slc3a2 |
| 3.55e-53 | FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_c61f0bb13617779dbf9b102456df15fa | p@chr8:11006242..11006246, - |
| 3.55e-53 | FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_c61f0bb13617779dbf9b102456df15fa | p@chr8:11006242..11006246, - |
| 3.17e-52 | FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_2dee495916ea750dfbccecfa1a216545 | p@chr4:169553987..169553999, + |
| 3.17e-52 | FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_2dee495916ea750dfbccecfa1a216545 | p@chr4:169553987..169553999, + |
| 8.65e-48 | FFCP PHASE1:Mm9::chr3:121130390..121130408,-#_02179eb838f06144ba22641d8087df55 | p@chr3:121130390..121130408, - |
| 8.65e-48 | FFCP PHASE1:Mm9::chr8:96677906..96677921,-#_02179eb838f06144ba22641d8087df55 | p@chr8:96677906..96677921, - |
| 8.65e-48 | FFCP PHASE2:Mm9::chr8:96677906..96677921,-#_02179eb838f06144ba22641d8087df55 | p@chr8:96677906..96677921, - |
| 8.65e-48 | FFCP PHASE1:Mm9::chr19:8788794..8788806,-#_02179eb838f06144ba22641d8087df55 | p6@Slc3a2 |
| 8.65e-48 | FFCP PHASE2:Mm9::chr8:96677795..96677811,+#_02179eb838f06144ba22641d8087df55 | p@chr8:96677795..96677811, + |
| 8.65e-48 | FFCP PHASE1:Mm9::chr8:96677795..96677811,+#_02179eb838f06144ba22641d8087df55 | p@chr8:96677795..96677811, + |
| 8.65e-48 | FFCP PHASE2:Mm9::chr3:121130390..121130408,-#_02179eb838f06144ba22641d8087df55 | p@chr3:121130390..121130408, - |
| 8.65e-48 | FFCP PHASE2:Mm9::chr19:8788794..8788806,-#_02179eb838f06144ba22641d8087df55 | p6@Slc3a2 |
| 1.01e-47 | FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_2d2a230f0385a160ae8656bc3023f32a | p@chr11:102758074..102758083, + |
| 1.01e-47 | FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_2d2a230f0385a160ae8656bc3023f32a | p@chr11:102758074..102758083, + |
| 1.01e-47 | FFCP PHASE2:Mm9::chr3:89028994..89029006,+#_2d2a230f0385a160ae8656bc3023f32a | p5@Thbs3 |
| 1.01e-47 | FFCP PHASE1:Mm9::chr3:89028994..89029006,+#_2d2a230f0385a160ae8656bc3023f32a | p5@Thbs3 |
| 1.39e-47 | FFCP PHASE2:Mm9::chr14:122864178..122864180,+#_258b544fdebf17a871b1df583c7e38e5 | p@chr14:122864178..122864180, + |
| 1.39e-47 | FFCP PHASE1:Mm9::chr14:122864178..122864180,+#_258b544fdebf17a871b1df583c7e38e5 | p@chr14:122864178..122864180, + |
| 4.52e-45 | FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_37b1f0f45e42ac8d2a1c7a2b21121cb3 | p3@Hepacam |
| 4.52e-45 | FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_37b1f0f45e42ac8d2a1c7a2b21121cb3 | p4@C1ql1 |
| 4.52e-45 | FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_37b1f0f45e42ac8d2a1c7a2b21121cb3 | p3@Hepacam |
| 4.52e-45 | FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_37b1f0f45e42ac8d2a1c7a2b21121cb3 | p4@C1ql1 |
| 5.38e-45 | FFCP PHASE2:Mm9::chr11:102754827..102754845,-#_230c929ec785310943113d2cc6c048cf | p@chr11:102754827..102754845, - |
| 5.38e-45 | FFCP PHASE1:Mm9::chr11:102754827..102754845,-#_230c929ec785310943113d2cc6c048cf | p@chr11:102754827..102754845, - |
| 7.62e-45 | FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_0b5e53ecb7e7c5429107fd9c574a447c | p@chr14:70592626..70592638, - |
| 7.62e-45 | FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_0b5e53ecb7e7c5429107fd9c574a447c | p@chr14:70592626..70592638, - |
| 8.43e-44 | FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr11:102749254..102749263, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_ee60e6c31278e76e55b54259881b1e06 | p@chr8:73022520..73022524, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_ee60e6c31278e76e55b54259881b1e06 | p@chr3:88990698..88990709, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr11:75244815..75244826, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr16:15895800..15895814, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr11:102749254..102749263, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_ee60e6c31278e76e55b54259881b1e06 | p@chr3:88990698..88990709, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_ee60e6c31278e76e55b54259881b1e06 | p@chr8:73022520..73022524, + |
| 8.43e-44 | FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr11:75244815..75244826, - |
| 8.43e-44 | FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_ee60e6c31278e76e55b54259881b1e06 | p@chr16:15895800..15895814, - |
| 3.14e-43 | FFCP PHASE2:Mm9::chr8:96676892..96676904,+#_433243dab79fc1e29d019e3088c78242 | p@chr8:96676892..96676904, + |
| 3.14e-43 | FFCP PHASE1:Mm9::chr8:96676892..96676904,+#_433243dab79fc1e29d019e3088c78242 | p@chr8:96676892..96676904, + |
| 3.14e-43 | FFCP PHASE1:Mm9::chr8:93340930..93340944,-#_433243dab79fc1e29d019e3088c78242 | p@chr8:93340930..93340944, - |
| 3.14e-43 | FFCP PHASE2:Mm9::chr8:93340930..93340944,-#_433243dab79fc1e29d019e3088c78242 | p@chr8:93340930..93340944, - |
| 3.62e-43 | FFCP PHASE1:Mm9::chr3:89030096..89030118,+#_54dc63d3b1c46e7a4c5b355011d8f4d6 | p4@Thbs3 |
| 3.62e-43 | FFCP PHASE2:Mm9::chr3:89030096..89030118,+#_54dc63d3b1c46e7a4c5b355011d8f4d6 | p4@Thbs3 |
| 4.82e-43 | FFCP PHASE2:Mm9::chr12:112910294..112910300,-#_fd8b8af8ac4bf17a242699400c205652 | p@chr12:112910294..112910300, - |
| 4.82e-43 | FFCP PHASE1:Mm9::chr12:112910294..112910300,-#_fd8b8af8ac4bf17a242699400c205652 | p@chr12:112910294..112910300, - |
| 5.57e-43 | FFCP PHASE1:Mm9::chr11:102755848..102755857,-#_8f89e0b20faf7245e4f092a76b242051 | p@chr11:102755848..102755857, - |
| 5.57e-43 | FFCP PHASE2:Mm9::chr11:102755848..102755857,-#_8f89e0b20faf7245e4f092a76b242051 | p@chr11:102755848..102755857, - |
| 1.31e-42 | FFCP PHASE1:Mm9::chr7:148211055..148211073,+#_52e06f496eeea1e442c197cef0cd629e | p@chr7:148211055..148211073, + |
| 1.31e-42 | FFCP PHASE2:Mm9::chr7:148211055..148211073,+#_52e06f496eeea1e442c197cef0cd629e | p@chr7:148211055..148211073, + |
| 2.31e-42 | FFCP PHASE1:Mm9::chr2:11261132..11261153,+#_4d75ac27f742891d29dd756aba6e9e36 | p2@Gm13293 |
| 2.31e-42 | FFCP PHASE2:Mm9::chr2:11261132..11261153,+#_4d75ac27f742891d29dd756aba6e9e36 | p2@Gm13293 |
| 1.46e-41 | FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_0c0d2b5b735c7470aac0d51607955abc | p@chr1:98642833..98642844, + |
| 1.46e-41 | FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_0c0d2b5b735c7470aac0d51607955abc | p@chr1:98642833..98642844, + |
| 1.6e-40 | FFCP PHASE1:Mm9::chr1:174128350..174128367,+#_adad6a1da39e75f175cee8821637680e | p@chr1:174128350..174128367, + |
| 1.6e-40 | FFCP PHASE2:Mm9::chr1:174128350..174128367,+#_adad6a1da39e75f175cee8821637680e | p@chr1:174128350..174128367, + |
| 7.38e-40 | FFCP PHASE2:Mm9::chr1:72895848..72895864,+#_d173f52a274079c013bb4d9aef7ad247 | p@chr1:72895848..72895864, + |
| 7.38e-40 | FFCP PHASE1:Mm9::chr1:72895848..72895864,+#_d173f52a274079c013bb4d9aef7ad247 | p@chr1:72895848..72895864, + |
| 1.17e-39 | FFCP PHASE2:Mm9::chr3:88990668..88990679,+#_6cfec50dd9ab33f8666d69c21486b7b4 | p@chr3:88990668..88990679, + |
| 1.17e-39 | FFCP PHASE1:Mm9::chr3:88990668..88990679,+#_6cfec50dd9ab33f8666d69c21486b7b4 | p@chr3:88990668..88990679, + |
| 1.59e-39 | FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_8c8e4dac0153991a3dfd7891997b5bcd | p17@Slc3a2 |
| 1.59e-39 | FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_8c8e4dac0153991a3dfd7891997b5bcd | p17@Slc3a2 |
| 2.16e-39 | FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_af1b6dd106da97506f7c7b96b3b7f253 | p@chr8:96704054..96704065, - |
| 2.16e-39 | FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_af1b6dd106da97506f7c7b96b3b7f253 | p@chr8:96704054..96704065, - |
| 2.2e-39 | FFCP PHASE2:Mm9::chr1:174150595..174150602,-#_adfaedd9a0f3e7a581dc5ca569ea020a | p@chr1:174150595..174150602, - |
| 2.2e-39 | FFCP PHASE1:Mm9::chr1:174150595..174150602,-#_adfaedd9a0f3e7a581dc5ca569ea020a | p@chr1:174150595..174150602, - |
| 2.51e-39 | FFCP PHASE1:Mm9::chr16:15895858..15895888,-#_c392cbf057bb969a2b115ef5fc12971c | p@chr16:15895858..15895888, - |
| 2.51e-39 | FFCP PHASE2:Mm9::chr1:174128178..174128192,-#_c392cbf057bb969a2b115ef5fc12971c | p@chr1:174128178..174128192, - |
| 2.51e-39 | FFCP PHASE1:Mm9::chr1:174128178..174128192,-#_c392cbf057bb969a2b115ef5fc12971c | p@chr1:174128178..174128192, - |
| 2.51e-39 | FFCP PHASE2:Mm9::chr16:15895858..15895888,-#_c392cbf057bb969a2b115ef5fc12971c | p@chr16:15895858..15895888, - |
| 8.08e-39 | FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_0f68af3cc14f4d854ddf21b7e7d2998b | p@chr1:72895732..72895747, - |
| 8.08e-39 | FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_0f68af3cc14f4d854ddf21b7e7d2998b | p@chr1:72895732..72895747, - |
| 4.04e-38 | FFCP PHASE2:Mm9::chr19:12839908..12839933,-#_001f0943aaf5a3d2590b5ea39a466a08 | p2@Cntf |
| 4.04e-38 | FFCP PHASE1:Mm9::chr19:12839908..12839933,-#_001f0943aaf5a3d2590b5ea39a466a08 | p2@Cntf |
| 5.94e-38 | FFCP PHASE2:Mm9::chr1:72898598..72898634,+#_f680c2db3c3e4de15e78f638524116c3 | p@chr1:72898598..72898634, + |
| 5.94e-38 | FFCP PHASE1:Mm9::chr1:72898598..72898634,+#_f680c2db3c3e4de15e78f638524116c3 | p@chr1:72898598..72898634, + |
| 7.4e-38 | FFCP PHASE2:Mm9::chr1:72898658..72898669,+#_ad387037dff5088016a3e6798a5ffd83 | p@chr1:72898658..72898669, + |
| 7.4e-38 | FFCP PHASE1:Mm9::chr1:72898658..72898669,+#_ad387037dff5088016a3e6798a5ffd83 | p@chr1:72898658..72898669, + |
| 1.03e-37 | FFCP PHASE1:Mm9::chr11:88828250..88828258,-#_92cc074ecb5ea70bf801dd259d4c204a | p1@ENSMUST00000121228 |
| 1.03e-37 | FFCP PHASE2:Mm9::chr11:88828250..88828258,-#_92cc074ecb5ea70bf801dd259d4c204a | p1@ENSMUST00000121228 |
| 9.57e-37 | FFCP PHASE2:Mm9::chr11:102754448..102754459,-#_40f0a9e47255785283950a136b83870e | p@chr11:102754448..102754459, - |
| 9.57e-37 | FFCP PHASE1:Mm9::chr11:102754448..102754459,-#_40f0a9e47255785283950a136b83870e | p@chr11:102754448..102754459, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr1:174128464..174128474,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr1:174128464..174128474, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr4:153975408..153975411,+#_90300965f4b1e90fcc80e757b12ff01b | p1@ENSMUST00000132106 |
| 1.13e-36 | FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr14:70592673..70592699, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr1:72895689..72895698, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr1:174128464..174128474,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr1:174128464..174128474, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr1:72895689..72895698, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_90300965f4b1e90fcc80e757b12ff01b | p@chr14:70592673..70592699, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr4:153975408..153975411,+#_90300965f4b1e90fcc80e757b12ff01b | p1@ENSMUST00000132106 |
| 1.59e-36 | FFCP PHASE1:Mm9::chr1:72898643..72898650,+#_1dea8538fce3b1861ee1e5d99b6f47cf | p@chr1:72898643..72898650, + |
| 1.59e-36 | FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_1dea8538fce3b1861ee1e5d99b6f47cf | p@chr1:72898728..72898736, + |
| 1.59e-36 | FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_1dea8538fce3b1861ee1e5d99b6f47cf | p@chr1:72898728..72898736, + |
| 1.59e-36 | FFCP PHASE2:Mm9::chr1:72898643..72898650,+#_1dea8538fce3b1861ee1e5d99b6f47cf | p@chr1:72898643..72898650, + |
| 1.88e-36 | FFCP PHASE1:Mm9::chr1:72895653..72895660,+#_2ccdc43cc26e2ebd9bf0770f681452b8 | p9@Igfbp2 |
| 1.88e-36 | FFCP PHASE2:Mm9::chr1:72895653..72895660,+#_2ccdc43cc26e2ebd9bf0770f681452b8 | p9@Igfbp2 |
