CL:0000128: Difference between revisions
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|id=CL:0000128 | |id=CL:0000128 | ||
|name=oligodendrocyte | |name=oligodendrocyte | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [MESH:A.08.637.600] | |def="A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [MESH:A.08.637.600] | ||
|xref=BTO:0000962;;FMA:54540 | |xref=BTO:0000962;;FMA:54540 | ||
|is_a=CL:0000126 | |is_a=CL:0000126 | ||
|synonym="oligodendroglia" RELATED [] | |synonym="oligodendroglia" RELATED [] | ||
|comment= | |comment= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0002453 | |develops_from=CL:0002453 | ||
| Line 20: | Line 19: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 12:59, 27 June 2012
| Name: | oligodendrocyte | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [MESH:A.08.637.600] | ||
| Xrefs: |
| ||
| Synonyms: | "oligodendroglia" RELATED [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000126(macroglial cell) |
|---|---|
| develops_from: | CL:0002453(oligodendrocyte precursor cell) |
| part_of: | UBERON:0001017(central nervous system) |
Children
| is a: | FF:0000124 (oligodendrocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10753-110D6
- 10762-110E6
- 10763-110E7
- 11235-116D2 (Astrocyte - cerebral cortex, donor1)
- 11316-117D2 (Astrocyte - cerebral cortex, donor2)
- 11392-118C6 (Astrocyte - cerebral cortex, donor3)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11500-119F6 (Astrocyte - cerebellum, donor1)
- 11550-120C2 (Mouse Astrocytes - cerebellar, donor2)
... further results Mouse (Mus musculus)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10753-110D6
- 10762-110E6
- 10763-110E7
- 11235-116D2 (Astrocyte - cerebral cortex, donor1)
- 11316-117D2 (Astrocyte - cerebral cortex, donor2)
- 11392-118C6 (Astrocyte - cerebral cortex, donor3)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11500-119F6 (Astrocyte - cerebellum, donor1)
- 11550-120C2 (Mouse Astrocytes - cerebellar, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000128 (oligodendrocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.94e-140 | FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_1ab412f6d3e4d2fdd26fb9cea65e2483 | p@chr4:169553987..169553999, + |
| 6.94e-140 | FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_1ab412f6d3e4d2fdd26fb9cea65e2483 | p@chr4:169553987..169553999, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr9:122602283..122602290,-#_73338d36c730177822c50ea23ca74a6f | p@chr9:122602283..122602290, - |
| 1.28e-84 | FFCP PHASE2:Hg19::chr9:122602283..122602290,-#_73338d36c730177822c50ea23ca74a6f | p@chr9:122602283..122602290, - |
| 6.32e-78 | FFCP PHASE1:Hg19::chr2:48919725..48919761,+#_7bd1b3eb3208f0f91a0c96f8d8503da3 | p@chr2:48919725..48919761, + |
| 6.32e-78 | FFCP PHASE2:Hg19::chr2:48919725..48919761,+#_7bd1b3eb3208f0f91a0c96f8d8503da3 | p@chr2:48919725..48919761, + |
| 8.34e-78 | FFCP PHASE1:Hg19::chr2:48919688..48919703,+#_8af2ce8fffcd3315233992b1c6d89a9d | p@chr2:48919688..48919703, + |
| 8.34e-78 | FFCP PHASE2:Hg19::chr2:48919688..48919703,+#_8af2ce8fffcd3315233992b1c6d89a9d | p@chr2:48919688..48919703, + |
| 1.79e-75 | FFCP PHASE1:Hg19::chr9:127025189..127025200,+#_946926d6ad775a49f0479860079be92d | p1@ENST00000437461 |
| 1.79e-75 | FFCP PHASE1:Hg19::chr11:68808268..68808276,-#_946926d6ad775a49f0479860079be92d | p@chr11:68808268..68808276, - |
| 1.79e-75 | FFCP PHASE2:Hg19::chr9:127025189..127025200,+#_946926d6ad775a49f0479860079be92d | p1@ENST00000437461 |
| 1.79e-75 | FFCP PHASE2:Hg19::chr11:68808268..68808276,-#_946926d6ad775a49f0479860079be92d | p@chr11:68808268..68808276, - |
| 2.17e-75 | FFCP PHASE1:Hg19::chr13:99349888..99349893,+#_188862c232c29741b1bb11a1de7c114b | p@chr13:99349888..99349893, + |
| 2.17e-75 | FFCP PHASE2:Hg19::chr13:99349888..99349893,+#_188862c232c29741b1bb11a1de7c114b | p@chr13:99349888..99349893, + |
| 2.83e-68 | FFCP PHASE1:Hg19::chr22:30176932..30176938,+#_5bf847c4343efbcdc27fab2a81ba1580 | p@chr22:30176932..30176938, + |
| 2.83e-68 | FFCP PHASE2:Hg19::chr22:30176932..30176938,+#_5bf847c4343efbcdc27fab2a81ba1580 | p@chr22:30176932..30176938, + |
| 2.25e-65 | FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_86417e489dba4f9986b302d89e7d6386 | p@chr8:96704054..96704065, - |
| 2.25e-65 | FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_86417e489dba4f9986b302d89e7d6386 | p@chr8:96704054..96704065, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_6612bad34d16ca88a76357d9c98cbedb | p@chr1:72895689..72895698, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_6612bad34d16ca88a76357d9c98cbedb | p@chr14:70592673..70592699, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_6612bad34d16ca88a76357d9c98cbedb | p@chr14:70592673..70592699, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_6612bad34d16ca88a76357d9c98cbedb | p@chr1:72895689..72895698, - |
| 2.34e-60 | FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_89aeb4cfa1f2688427b2cad9a387dcfa | p@chr1:72898728..72898736, + |
| 2.34e-60 | FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_89aeb4cfa1f2688427b2cad9a387dcfa | p@chr1:72898728..72898736, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chr7:29152679..29152684,-#_76eadb78f069be000934a1046e1e1b68 | p@chr7:29152679..29152684, - |
| 3.91e-58 | FFCP PHASE2:Mm9::chr7:29152679..29152684,-#_76eadb78f069be000934a1046e1e1b68 | p@chr7:29152679..29152684, - |
| 3.91e-58 | FFCP PHASE2:Mm9::chr9:43915826..43915844,+#_76eadb78f069be000934a1046e1e1b68 | p@chr9:43915826..43915844, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chr6:92777773..92777784,+#_76eadb78f069be000934a1046e1e1b68 | p4@ENSMUST00000133858 |
| 3.91e-58 | FFCP PHASE1:Mm9::chr6:92777773..92777784,+#_76eadb78f069be000934a1046e1e1b68 | p4@ENSMUST00000133858 |
| 3.91e-58 | FFCP PHASE1:Mm9::chr9:43915826..43915844,+#_76eadb78f069be000934a1046e1e1b68 | p@chr9:43915826..43915844, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr8:32488262..32488265,+#_02820919ae17e5d654ff68992c7ac758 | p@chr8:32488262..32488265, + |
| 4.76e-57 | FFCP PHASE2:Hg19::chr8:32488262..32488265,+#_02820919ae17e5d654ff68992c7ac758 | p@chr8:32488262..32488265, + |
| 8.4e-54 | FFCP PHASE2:Hg19::chr6:45296191..45296203,+#_64baee1a3cf5e62fef3a0424edb70f4c | p13@RUNX2 |
| 8.4e-54 | FFCP PHASE1:Hg19::chr6:45296191..45296203,+#_64baee1a3cf5e62fef3a0424edb70f4c | p13@RUNX2 |
| 2.53e-52 | FFCP PHASE1:Mm9::chr19:17030554..17030565,+#_de6960453e1bbd1c211829a69b7da78f | p5@Prune2 |
| 2.53e-52 | FFCP PHASE2:Mm9::chr19:17030554..17030565,+#_de6960453e1bbd1c211829a69b7da78f | p5@Prune2 |
| 3.23e-52 | FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_a4ad244ab6ff07a32f32591cd8ec781a | p@chr14:70592626..70592638, - |
| 3.23e-52 | FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_a4ad244ab6ff07a32f32591cd8ec781a | p@chr14:70592626..70592638, - |
| 4.11e-52 | FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_72a3018b5aca772ee88c71e9f1ec00ff | p@chr1:72873192..72873206, + |
| 4.11e-52 | FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_72a3018b5aca772ee88c71e9f1ec00ff | p@chr8:28132545..28132551, + |
| 4.11e-52 | FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_72a3018b5aca772ee88c71e9f1ec00ff | p@chr8:28132545..28132551, + |
| 4.11e-52 | FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_72a3018b5aca772ee88c71e9f1ec00ff | p@chr1:72873192..72873206, + |
| 5.23e-52 | FFCP PHASE1:Mm9::chr1:72898789..72898796,+#_bea4be9604e96ee3c88b1f28bd852c9b | p@chr1:72898789..72898796, + |
| 5.23e-52 | FFCP PHASE2:Mm9::chr1:72898789..72898796,+#_bea4be9604e96ee3c88b1f28bd852c9b | p@chr1:72898789..72898796, + |
| 5.23e-52 | FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_bea4be9604e96ee3c88b1f28bd852c9b | p3@Hepacam |
| 5.23e-52 | FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_bea4be9604e96ee3c88b1f28bd852c9b | p3@Hepacam |
| 2.3e-51 | FFCP PHASE1:Hg19::chr7:42192092..42192108,-#_b7b787364afd5e37fe7c8625ba347da6 | p13@GLI3 |
| 2.3e-51 | FFCP PHASE2:Hg19::chr7:42192092..42192108,-#_b7b787364afd5e37fe7c8625ba347da6 | p13@GLI3 |
| 3.85e-51 | FFCP PHASE2:Hg19::chr20:35856764..35856768,+#_0f523e521fd55f1f5a024e8ff769c170 | p25@RPN2 |
| 3.85e-51 | FFCP PHASE1:Hg19::chr20:35856764..35856768,+#_0f523e521fd55f1f5a024e8ff769c170 | p25@RPN2 |
| 5.43e-51 | FFCP PHASE1:Hg19::chr14:33403217..33403226,+#_23422046768263f8d11bc0e9c9141327 | p@chr14:33403217..33403226, + |
| 5.43e-51 | FFCP PHASE2:Hg19::chr14:33403217..33403226,+#_23422046768263f8d11bc0e9c9141327 | p@chr14:33403217..33403226, + |
| 6.95e-51 | FFCP PHASE1:Hg19::chr4:169553961..169553972,+#_b074deae254c93a0ea779c005b7530c8 | p@chr4:169553961..169553972, + |
| 6.95e-51 | FFCP PHASE2:Hg19::chr4:169553961..169553972,+#_b074deae254c93a0ea779c005b7530c8 | p@chr4:169553961..169553972, + |
| 7.9e-51 | FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_5b64b6fb86bfce392d98c882ef070c4c | p@chr1:98642833..98642844, + |
| 7.9e-51 | FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_5b64b6fb86bfce392d98c882ef070c4c | p@chr1:98642833..98642844, + |
| 8.98e-51 | FFCP PHASE1:Hg19::chr1:98518907..98518920,+#_e4e33457c6bec0f2fe96d1ba709ff459 | p@chr1:98518907..98518920, + |
| 8.98e-51 | FFCP PHASE2:Hg19::chr1:98518907..98518920,+#_e4e33457c6bec0f2fe96d1ba709ff459 | p@chr1:98518907..98518920, + |
| 4.49e-48 | FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_39fcbb5f600ee9d86b4f8bf58e74507c | p@chr1:72895732..72895747, - |
| 4.49e-48 | FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_39fcbb5f600ee9d86b4f8bf58e74507c | p@chr1:72895732..72895747, - |
| 1.09e-46 | FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_7ae8abb5831d1692f5674ae57189a26a | p@chr8:73022520..73022524, + |
| 1.09e-46 | FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_7ae8abb5831d1692f5674ae57189a26a | p@chr8:73022520..73022524, + |
| 1.09e-46 | FFCP PHASE1:Mm9::chr1:72895881..72895885,-#_7ae8abb5831d1692f5674ae57189a26a | p@chr1:72895881..72895885, - |
| 1.09e-46 | FFCP PHASE2:Mm9::chr1:72895881..72895885,-#_7ae8abb5831d1692f5674ae57189a26a | p@chr1:72895881..72895885, - |
| 1.12e-46 | FFCP PHASE2:Hg19::chr4:77356957..77356973,+#_bcec6ba4010fd9b6ef521e22c5e71945 | p20@SHROOM3 |
| 1.12e-46 | FFCP PHASE1:Hg19::chr4:77356957..77356973,+#_bcec6ba4010fd9b6ef521e22c5e71945 | p20@SHROOM3 |
| 1.42e-46 | FFCP PHASE1:Mm9::chr19:40457627..40457636,-#_502088e29ecb3356d122177e39e0b4a4 | p9@Sorbs1 |
| 1.42e-46 | FFCP PHASE2:Mm9::chr19:40457627..40457636,-#_502088e29ecb3356d122177e39e0b4a4 | p9@Sorbs1 |
| 1.86e-46 | FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_04ab24624e6990d6c29dcf6b0f8eac2b | p@chr3:88990698..88990709, + |
| 1.86e-46 | FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_04ab24624e6990d6c29dcf6b0f8eac2b | p@chr3:88990698..88990709, + |
| 4.13e-46 | FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_a1aca487c66cc43c20bb628a0901add9 | p17@Slc3a2 |
| 4.13e-46 | FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_a1aca487c66cc43c20bb628a0901add9 | p17@Slc3a2 |
| 4.13e-46 | FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_a1aca487c66cc43c20bb628a0901add9 | p14@Slc3a2 |
| 4.13e-46 | FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_a1aca487c66cc43c20bb628a0901add9 | p14@Slc3a2 |
| 4.13e-46 | FFCP PHASE1:Mm9::chr11:7114172..7114182,-#_a1aca487c66cc43c20bb628a0901add9 | p4@Igfbp3 |
| 4.13e-46 | FFCP PHASE2:Mm9::chr11:7114172..7114182,-#_a1aca487c66cc43c20bb628a0901add9 | p4@Igfbp3 |
| 7.81e-46 | FFCP PHASE2:Mm9::chr11:7110185..7110197,-#_8a76d750a461d3e33d20e0e6ba9d5986 | p@chr11:7110185..7110197, - |
| 7.81e-46 | FFCP PHASE1:Mm9::chr11:7110185..7110197,-#_8a76d750a461d3e33d20e0e6ba9d5986 | p@chr11:7110185..7110197, - |
| 1.19e-45 | FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_e9c92299c5e093817deba7428514f8df | p@chr8:11006242..11006246, - |
| 1.19e-45 | FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_e9c92299c5e093817deba7428514f8df | p@chr8:11006242..11006246, - |
| 1.77e-45 | FFCP PHASE1:Hg19::chr5:135540733..135540788,-#_13b37556f8c6060d756f55d550c006d8 | p@chr5:135540733..135540788, - |
| 1.77e-45 | FFCP PHASE2:Hg19::chr5:135540733..135540788,-#_13b37556f8c6060d756f55d550c006d8 | p@chr5:135540733..135540788, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr11:66340488..66340520,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr11:66340488..66340520, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr12:86222392..86222395,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr12:86222392..86222395, - |
| 5.38e-44 | FFCP PHASE2:Mm9::chr11:66340488..66340520,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr11:66340488..66340520, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr11:45940767..45940771,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr11:45940767..45940771, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr14:70592586..70592593,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr14:70592586..70592593, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr14:70592586..70592593,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr14:70592586..70592593, - |
| 5.38e-44 | FFCP PHASE2:Mm9::chr12:86222392..86222395,-#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr12:86222392..86222395, - |
| 5.38e-44 | FFCP PHASE2:Mm9::chr11:45940767..45940771,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr11:45940767..45940771, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr1:154940591..154940634,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr1:154940591..154940634, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr6:84135739..84135768,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr6:84135739..84135768, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr6:84135739..84135768,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr6:84135739..84135768, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr1:154940591..154940634,+#_99fe1b5ac11c0ce6b9565a99b4602987 | p@chr1:154940591..154940634, + |
| 5.58e-44 | FFCP PHASE1:Mm9::chr1:72896186..72896195,+#_a561a15d43a1246d42935bbccc8cbf08 | p@chr1:72896186..72896195, + |
| 5.58e-44 | FFCP PHASE2:Mm9::chr1:72896186..72896195,+#_a561a15d43a1246d42935bbccc8cbf08 | p@chr1:72896186..72896195, + |
| 5.22e-43 | FFCP PHASE1:Hg19::chr12:41374792..41374806,+#_1eea38a1343fa2fed2922d10ffcbe0e1 | p@chr12:41374792..41374806, + |
| 5.22e-43 | FFCP PHASE2:Hg19::chr12:41374792..41374806,+#_1eea38a1343fa2fed2922d10ffcbe0e1 | p@chr12:41374792..41374806, + |
| 6.96e-43 | FFCP PHASE2:Hg19::chr2:104096987..104096993,-#_1ac79b68a0afa21866860f30c7cf6412 | p@chr2:104096987..104096993, - |
| 6.96e-43 | FFCP PHASE1:Hg19::chr11:60615014..60615025,+#_1ac79b68a0afa21866860f30c7cf6412 | p8@CCDC86 |
