CL:1000500: Difference between revisions
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|part_of= | |part_of=UBERON:0005215 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Latest revision as of 13:05, 27 June 2012
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002320(connective tissue cell),CL:1000497(kidney cell) |
|---|---|
| part_of: | UBERON:0005215(kidney interstitium) |
Children
| is a: | CL:0002173 (extraglomerular mesangial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Mouse (Mus musculus)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000500 (kidney interstitial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.34e-79 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_c3b9a7e6a6427a4999ef412432f99fe5 | p@chr2:133426030..133426041, - |
| 2.34e-79 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_c3b9a7e6a6427a4999ef412432f99fe5 | p@chr2:133426030..133426041, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_e10a52b099dc5fb96bd41239cad4e42b | p23@TTC39A |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_e10a52b099dc5fb96bd41239cad4e42b | p23@TTC39A |
| 2.03e-66 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_7e2bd5568f7221c939619806c48fc55e | p@chr2:133426106..133426117, - |
| 2.03e-66 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_7e2bd5568f7221c939619806c48fc55e | p@chr2:133426106..133426117, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_82e48a7d1688e3cb70afc55442afe0ed | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_82e48a7d1688e3cb70afc55442afe0ed | p8@PAX2 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_82e48a7d1688e3cb70afc55442afe0ed | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_82e48a7d1688e3cb70afc55442afe0ed | p8@PAX2 |
| 3.11e-50 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_8c26d1055503ba1a81f9556311a33a3a | p19@PEMT |
| 3.11e-50 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_8c26d1055503ba1a81f9556311a33a3a | p19@PEMT |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_91cd6e8eb2e0fde9404b3e55b7ec4e6e | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_91cd6e8eb2e0fde9404b3e55b7ec4e6e | p10@PAX2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_91cd6e8eb2e0fde9404b3e55b7ec4e6e | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_91cd6e8eb2e0fde9404b3e55b7ec4e6e | p10@PAX2 |
| 8.98e-41 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_8503aaec11214464a8f087a1bf3dedd0 | p@chr17:171082..171101, + |
| 8.98e-41 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_8503aaec11214464a8f087a1bf3dedd0 | p@chr17:171082..171101, + |
| 1.1e-40 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_c3e06993d727e720a32a4f4bfc9be84e | p@chr3:172384246..172384250, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_c3e06993d727e720a32a4f4bfc9be84e | p@chr3:172384246..172384250, + |
| 1.64e-40 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_bf73ff6de0b88183a094bcb802d3f414 | p@chr1:45087902..45087912, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_bf73ff6de0b88183a094bcb802d3f414 | p@chr1:45087902..45087912, + |
| 3.68e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_d72e062ab3be0ed2ed8ebf515af46d04 | p5@PAX2 |
| 3.68e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_d72e062ab3be0ed2ed8ebf515af46d04 | p5@PAX2 |
| 8.2e-37 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_8d5901824b29f3eafcf6a7845c2f9bdb | p6@PAX2 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_8d5901824b29f3eafcf6a7845c2f9bdb | p6@PAX2 |
| 9.84e-37 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_7cf5e55e825c8155e227e4a395ed51b6 | p3@CRB2 |
| 9.84e-37 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_7cf5e55e825c8155e227e4a395ed51b6 | p3@CRB2 |
| 6.0e-34 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_d3340702e1bbde9a2da9853d2121ce38 | p@chr2:113984760..113984792, + |
| 6.0e-34 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_d3340702e1bbde9a2da9853d2121ce38 | p@chr2:113984760..113984792, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_deb14192edfbaef73baf2d8a31fa4e29 | p@chr11:555661..555679, + |
| 8.39e-34 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_5afe2af7993c74370ecd357485a0108c | p13@SPOCK2 |
| 8.39e-34 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_5afe2af7993c74370ecd357485a0108c | p13@SPOCK2 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_6216b6634d79ade15b8dc153ef5d703c | p25@PHLDB1 |
| 1.17e-33 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_6216b6634d79ade15b8dc153ef5d703c | p25@PHLDB1 |
| 3.35e-32 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_51d5a84cd772235cbaf4c7eb21366385 | p@chr2:693362..693373, + |
| 3.35e-32 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_51d5a84cd772235cbaf4c7eb21366385 | p@chr2:693362..693373, + |
| 2.54e-31 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_fcd91ebc5353b9b7183fdfd4460c5510 | p1@RIPPLY1 |
| 2.54e-31 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_fcd91ebc5353b9b7183fdfd4460c5510 | p1@RIPPLY1 |
| 8.05e-30 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_36684d8fa2b667ebb928359c50189af7 | p@chr17:171147..171161, + |
| 8.05e-30 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_36684d8fa2b667ebb928359c50189af7 | p@chr17:171147..171161, + |
| 2.96e-29 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_4faaec13ad2b8ea9c8751a7d88db4b2c | p@chr2:165477405..165477418, - |
| 2.96e-29 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_4faaec13ad2b8ea9c8751a7d88db4b2c | p@chr2:165477405..165477418, - |
| 4.55e-29 | FFCP PHASE2:Hg19::chr1:874109..874143,+#_ab5e6a93534de52c7a164ab33fcba55c | p@chr1:874109..874143, + |
| 4.55e-29 | FFCP PHASE1:Hg19::chr1:874109..874143,+#_ab5e6a93534de52c7a164ab33fcba55c | p@chr1:874109..874143, + |
| 1.43e-28 | FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_fbbc92f98da2d38fdc21b4d9a05b1ebd | p@chr2:113999199..113999214, + |
| 1.43e-28 | FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_fbbc92f98da2d38fdc21b4d9a05b1ebd | p@chr2:113999199..113999214, + |
| 1.83e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_7a4775fe46fe97cb701c7db1371029a0 | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_7a4775fe46fe97cb701c7db1371029a0 | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_7a4775fe46fe97cb701c7db1371029a0 | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_7a4775fe46fe97cb701c7db1371029a0 | p7@LRRN4 |
| 2.74e-27 | FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_f21a3453578f2381af9ba68a9f0dee04 | p@chr19:56091499..56091517, - |
| 2.74e-27 | FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_f21a3453578f2381af9ba68a9f0dee04 | p@chr19:56091499..56091517, - |
| 2.78e-26 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_07b7e31e4881771226653e076a911baa | p@chr9:112260040..112260045, + |
| 2.78e-26 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_07b7e31e4881771226653e076a911baa | p@chr9:112260040..112260045, + |
| 4.63e-26 | FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_a37d47411161b1e181967557ebb5a36c | p@chr22:30645170..30645182, - |
| 4.63e-26 | FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_a37d47411161b1e181967557ebb5a36c | p@chr22:30645170..30645182, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_875e7a478dfbc1b145214d8609357bf5 | p@chr8:22419319..22419327, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_875e7a478dfbc1b145214d8609357bf5 | p@chr8:22419319..22419327, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_834aca48347fa1ff39c97e2288201605 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_834aca48347fa1ff39c97e2288201605 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_834aca48347fa1ff39c97e2288201605 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_834aca48347fa1ff39c97e2288201605 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_834aca48347fa1ff39c97e2288201605 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_834aca48347fa1ff39c97e2288201605 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_834aca48347fa1ff39c97e2288201605 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_834aca48347fa1ff39c97e2288201605 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_834aca48347fa1ff39c97e2288201605 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_834aca48347fa1ff39c97e2288201605 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_834aca48347fa1ff39c97e2288201605 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_834aca48347fa1ff39c97e2288201605 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_834aca48347fa1ff39c97e2288201605 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_834aca48347fa1ff39c97e2288201605 | p15@WT1 |
| 2.37e-25 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_20952ba8a83e0f9d4778bb3b8a1d2255 | p1@ENST00000523364, p1@uc010kux.1 |
| 2.37e-25 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_20952ba8a83e0f9d4778bb3b8a1d2255 | p1@ENST00000523364, p1@uc010kux.1 |
| 4.38e-25 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_07c0f124554c0580fc21dd77615396ab | p16@HOXA10 |
| 4.38e-25 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_07c0f124554c0580fc21dd77615396ab | p16@HOXA10 |
| 4.43e-25 | FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_a0550fd9771a1ecc6afd421c0d9473f2 | p6@MTMR11 |
| 4.43e-25 | FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_a0550fd9771a1ecc6afd421c0d9473f2 | p6@MTMR11 |
| 7.09e-25 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_c167a93f1fd811e40606f38e34512a7e | p4@PAX2 |
| 7.09e-25 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_c167a93f1fd811e40606f38e34512a7e | p4@PAX2 |
| 3.76e-24 | FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_c8f3be3c7cb573c5ee7d0cd1475b73bc | p@chr1:46797583..46797614, - |
| 3.76e-24 | FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_c8f3be3c7cb573c5ee7d0cd1475b73bc | p@chr1:46797583..46797614, - |
| 7.62e-24 | FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_c82a2b988df1aa1dff1d288a781033da | p@chr6:94129519..94129544, + |
| 7.62e-24 | FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_c82a2b988df1aa1dff1d288a781033da | p@chr6:94129519..94129544, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e49a255f83c255a0a3d1af281b2859b8 | p@chr2:693380..693398, + |
| 8.02e-24 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e49a255f83c255a0a3d1af281b2859b8 | p@chr2:693380..693398, + |
| 8.98e-24 | FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_43a33643cf9eb1a1c6df8a8334bc2c51 | p@chr2:133426077..133426103, - |
| 8.98e-24 | FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_43a33643cf9eb1a1c6df8a8334bc2c51 | p@chr2:133426077..133426103, - |
| 1.99e-23 | FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_66dec1592438fe26d9f9cd690348be89 | p5@WT1-AS |
| 1.99e-23 | FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_66dec1592438fe26d9f9cd690348be89 | p5@WT1-AS |
| 4.37e-23 | FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_9d5ae59b1558cf10a516cf3e9d993902 | p@chr2:176968471..176968476, - |
| 4.37e-23 | FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_9d5ae59b1558cf10a516cf3e9d993902 | p@chr2:176968471..176968476, - |
| 4.89e-23 | FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_c9f9eeb598e3033c44915284e09b982a | p1@ENST00000469884 |
| 4.89e-23 | FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_c9f9eeb598e3033c44915284e09b982a | p1@ENST00000469884 |
