CL:1000618: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
| Line 20: | Line 19: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0002303 | |part_of=UBERON:0002303 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:05, 27 June 2012
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002681(kidney cortical cell) |
|---|---|
| part_of: | UBERON:0002303(juxtaglomerular apparatus) |
Children
| is a: | CL:0002173 (extraglomerular mesangial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Mouse (Mus musculus)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000618 (juxtaglomerular complex cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.34e-79 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_9d37e40ec7b166614cdc64516631fdb5 | p@chr2:133426030..133426041, - |
| 2.34e-79 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_9d37e40ec7b166614cdc64516631fdb5 | p@chr2:133426030..133426041, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_bb0bdc8c3c2a2ce82dff35aa7996fb67 | p23@TTC39A |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_bb0bdc8c3c2a2ce82dff35aa7996fb67 | p23@TTC39A |
| 2.03e-66 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_d037705eeab6b201090d4190f7ed71aa | p@chr2:133426106..133426117, - |
| 2.03e-66 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_d037705eeab6b201090d4190f7ed71aa | p@chr2:133426106..133426117, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_25d93327f3207d7ce1ac3a3c9dcd8a3d | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_25d93327f3207d7ce1ac3a3c9dcd8a3d | p8@PAX2 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_25d93327f3207d7ce1ac3a3c9dcd8a3d | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_25d93327f3207d7ce1ac3a3c9dcd8a3d | p8@PAX2 |
| 3.11e-50 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_19b01da31ac87f2df220d4dad28929e7 | p19@PEMT |
| 3.11e-50 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_19b01da31ac87f2df220d4dad28929e7 | p19@PEMT |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_670e5497c73aec0ea4bf0de518d3723b | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_670e5497c73aec0ea4bf0de518d3723b | p10@PAX2 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_670e5497c73aec0ea4bf0de518d3723b | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_670e5497c73aec0ea4bf0de518d3723b | p10@PAX2 |
| 8.98e-41 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_b8ea721989817a748c018471874fc24a | p@chr17:171082..171101, + |
| 8.98e-41 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_b8ea721989817a748c018471874fc24a | p@chr17:171082..171101, + |
| 1.1e-40 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_43561cc92632af0797ac06edeafa8aa0 | p@chr3:172384246..172384250, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_43561cc92632af0797ac06edeafa8aa0 | p@chr3:172384246..172384250, + |
| 1.64e-40 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_b0d4589d38999582578fdf79f49a85ee | p@chr1:45087902..45087912, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_b0d4589d38999582578fdf79f49a85ee | p@chr1:45087902..45087912, + |
| 3.68e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_8efa726c362cf4797af30cea878022b3 | p5@PAX2 |
| 3.68e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_8efa726c362cf4797af30cea878022b3 | p5@PAX2 |
| 8.2e-37 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_b123b273929b886baadf65c4c0ee6f3f | p6@PAX2 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_b123b273929b886baadf65c4c0ee6f3f | p6@PAX2 |
| 9.84e-37 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_d5f44f406d35751814e371e8d74af6ac | p3@CRB2 |
| 9.84e-37 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_d5f44f406d35751814e371e8d74af6ac | p3@CRB2 |
| 6.0e-34 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_97ea067d9a9bfe578f245aaaca77d1f1 | p@chr2:113984760..113984792, + |
| 6.0e-34 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_97ea067d9a9bfe578f245aaaca77d1f1 | p@chr2:113984760..113984792, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_a8adf05419f5d0793b0c843c627e4985 | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_a8adf05419f5d0793b0c843c627e4985 | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_a8adf05419f5d0793b0c843c627e4985 | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_a8adf05419f5d0793b0c843c627e4985 | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_a8adf05419f5d0793b0c843c627e4985 | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_a8adf05419f5d0793b0c843c627e4985 | p@chr7:27164585..27164612, - |
| 8.39e-34 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_0db74d9bc91f820ca2ddd778cb41c25c | p13@SPOCK2 |
| 8.39e-34 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_0db74d9bc91f820ca2ddd778cb41c25c | p13@SPOCK2 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_160b92fc9a730a1c5e6c0b78f9be7aaf | p25@PHLDB1 |
| 1.17e-33 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_160b92fc9a730a1c5e6c0b78f9be7aaf | p25@PHLDB1 |
| 3.35e-32 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_dc621bcaa9e704e108058fb3d91d3059 | p@chr2:693362..693373, + |
| 3.35e-32 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_dc621bcaa9e704e108058fb3d91d3059 | p@chr2:693362..693373, + |
| 2.54e-31 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_be7b2e18adb9f0208ed78b318d7ad85a | p1@RIPPLY1 |
| 2.54e-31 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_be7b2e18adb9f0208ed78b318d7ad85a | p1@RIPPLY1 |
| 8.05e-30 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_4fc4e6e4ed925cc48b4ceff1b121e3a5 | p@chr17:171147..171161, + |
| 8.05e-30 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_4fc4e6e4ed925cc48b4ceff1b121e3a5 | p@chr17:171147..171161, + |
| 2.96e-29 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_a94c09c5536b99cd5773c13cdc37c5a3 | p@chr2:165477405..165477418, - |
| 2.96e-29 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_a94c09c5536b99cd5773c13cdc37c5a3 | p@chr2:165477405..165477418, - |
| 4.55e-29 | FFCP PHASE2:Hg19::chr1:874109..874143,+#_ad7c084931f0d414115953cfcba040de | p@chr1:874109..874143, + |
| 4.55e-29 | FFCP PHASE1:Hg19::chr1:874109..874143,+#_ad7c084931f0d414115953cfcba040de | p@chr1:874109..874143, + |
| 1.43e-28 | FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_bdad446b0d3bb5e4d330cb34fdb452ca | p@chr2:113999199..113999214, + |
| 1.43e-28 | FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_bdad446b0d3bb5e4d330cb34fdb452ca | p@chr2:113999199..113999214, + |
| 1.83e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_da33873903b7f20d3935312382d553ee | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_da33873903b7f20d3935312382d553ee | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_da33873903b7f20d3935312382d553ee | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_da33873903b7f20d3935312382d553ee | p7@LRRN4 |
| 2.74e-27 | FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_cfe3d53fbfd992c208f7457dc50200e9 | p@chr19:56091499..56091517, - |
| 2.74e-27 | FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_cfe3d53fbfd992c208f7457dc50200e9 | p@chr19:56091499..56091517, - |
| 2.78e-26 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_d0134a4526295a1516983e1053bbbc73 | p@chr9:112260040..112260045, + |
| 2.78e-26 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_d0134a4526295a1516983e1053bbbc73 | p@chr9:112260040..112260045, + |
| 4.63e-26 | FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_2374bd646a5327bcf1d61db043af0779 | p@chr22:30645170..30645182, - |
| 4.63e-26 | FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_2374bd646a5327bcf1d61db043af0779 | p@chr22:30645170..30645182, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_25bb311fd2b2f514a29583900a93e2b7 | p@chr8:22419319..22419327, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_25bb311fd2b2f514a29583900a93e2b7 | p@chr8:22419319..22419327, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_fc9c3b5c1b0555a323aee8b2f471ef28 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_fc9c3b5c1b0555a323aee8b2f471ef28 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_fc9c3b5c1b0555a323aee8b2f471ef28 | p@chr2:176973165..176973169, - |
| 2.37e-25 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_90518022ee90b671320f8741ff9b6e5a | p1@ENST00000523364, p1@uc010kux.1 |
| 2.37e-25 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_90518022ee90b671320f8741ff9b6e5a | p1@ENST00000523364, p1@uc010kux.1 |
| 4.38e-25 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_4394970c2c90b00c3f7ff95bb10ba46f | p16@HOXA10 |
| 4.38e-25 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_4394970c2c90b00c3f7ff95bb10ba46f | p16@HOXA10 |
| 4.43e-25 | FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_35eee29da0f811d6bb7e34b0ac8023a4 | p6@MTMR11 |
| 4.43e-25 | FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_35eee29da0f811d6bb7e34b0ac8023a4 | p6@MTMR11 |
| 7.09e-25 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_2d23b8721081a5e6a07696e639b24e79 | p4@PAX2 |
| 7.09e-25 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_2d23b8721081a5e6a07696e639b24e79 | p4@PAX2 |
| 3.76e-24 | FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_6c2abc58ac14ae0e6374f9d2d64f0df2 | p@chr1:46797583..46797614, - |
| 3.76e-24 | FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_6c2abc58ac14ae0e6374f9d2d64f0df2 | p@chr1:46797583..46797614, - |
| 7.62e-24 | FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_384ba676e9d161986c1ae17c6fc9840f | p@chr6:94129519..94129544, + |
| 7.62e-24 | FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_384ba676e9d161986c1ae17c6fc9840f | p@chr6:94129519..94129544, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_66a05fe0cb43fd373cb6bb23b9b2cafa | p@chr2:693380..693398, + |
| 8.02e-24 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_66a05fe0cb43fd373cb6bb23b9b2cafa | p@chr2:693380..693398, + |
| 8.98e-24 | FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_3c6fd36401c7c7a14ae2c1d034329cc4 | p@chr2:133426077..133426103, - |
| 8.98e-24 | FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_3c6fd36401c7c7a14ae2c1d034329cc4 | p@chr2:133426077..133426103, - |
| 1.99e-23 | FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_2d3d3d7b434692c2b874f22fb6dccddd | p5@WT1-AS |
| 1.99e-23 | FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_2d3d3d7b434692c2b874f22fb6dccddd | p5@WT1-AS |
| 4.37e-23 | FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_96e90ad074807f8ec8b3f435a6b80b27 | p@chr2:176968471..176968476, - |
| 4.37e-23 | FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_96e90ad074807f8ec8b3f435a6b80b27 | p@chr2:176968471..176968476, - |
| 4.89e-23 | FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_3bf15a7d3bd93ea5ccce322b9aadfde2 | p1@ENST00000469884 |
| 4.89e-23 | FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_3bf15a7d3bd93ea5ccce322b9aadfde2 | p1@ENST00000469884 |
