UBERON:0003586: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003586
|name=trunk connective tissue
|namespace=
|def="A portion of connective tissue that is part of a trunk [Obol]." [OBOL:automatic]
|xref=MA:0000...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Line 21: | Line 20: | ||
|part_of=UBERON:0002100 | |part_of=UBERON:0002100 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Latest revision as of 13:34, 27 June 2012
Name: | trunk connective tissue | ||
---|---|---|---|
Definition: | "A portion of connective tissue that is part of a trunk [Obol]." [OBOL:automatic] | ||
Xrefs: |
| ||
Synonyms: |
"connective tissue of torso" EXACT [OBOL:automatic] "connective tissue of trunk" EXACT [OBOL:automatic] "portion of connective tissue of torso" EXACT [OBOL:automatic] "portion of connective tissue of trunk" EXACT [OBOL:automatic] "textus connectivus of torso" EXACT [OBOL:automatic] "textus connectivus of trunk" EXACT [OBOL:automatic] "torso connective tissue" EXACT [OBOL:automatic] "torso portion of connective tissue" EXACT [OBOL:automatic] "torso textus connectivus" EXACT [OBOL:automatic] "trunk portion of connective tissue" EXACT [OBOL:automatic] "trunk textus connectivus" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002384(connective tissue) |
---|---|
part_of: | UBERON:0002100(trunk) |
Children
is a: | UBERON:0003838 (abdominal segment connective tissue) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003586 (trunk connective tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
2.34e-79 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_5d64151807c9a57c9617d9569cf5ecd2 | p@chr2:133426030..133426041, - |
2.34e-79 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_5d64151807c9a57c9617d9569cf5ecd2 | p@chr2:133426030..133426041, - |
3.49e-79 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_3e69826c1d1f5d7d83574e4dadd97e92 | p23@TTC39A |
3.49e-79 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_3e69826c1d1f5d7d83574e4dadd97e92 | p23@TTC39A |
2.03e-66 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_0f191db94daff90b75b4e7f5ee4df6d6 | p@chr2:133426106..133426117, - |
2.03e-66 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_0f191db94daff90b75b4e7f5ee4df6d6 | p@chr2:133426106..133426117, - |
1.46e-50 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_2b58d55f794090abb198897081229752 | p@chr10:134535354..134535366, - |
1.46e-50 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_2b58d55f794090abb198897081229752 | p8@PAX2 |
1.46e-50 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_2b58d55f794090abb198897081229752 | p@chr10:134535354..134535366, - |
1.46e-50 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_2b58d55f794090abb198897081229752 | p8@PAX2 |
3.11e-50 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_d359154148305d7f7126136b18abd61c | p19@PEMT |
3.11e-50 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_d359154148305d7f7126136b18abd61c | p19@PEMT |
4.52e-50 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_0d49221c4d6afce29795f112770c3216 | p10@PAX2 |
4.52e-50 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_0d49221c4d6afce29795f112770c3216 | p@chr9:81641483..81641491, - |
4.52e-50 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_0d49221c4d6afce29795f112770c3216 | p10@PAX2 |
4.52e-50 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_0d49221c4d6afce29795f112770c3216 | p@chr9:81641483..81641491, - |
8.98e-41 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_af4327aed849130964370b92ebafc532 | p@chr17:171082..171101, + |
8.98e-41 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_af4327aed849130964370b92ebafc532 | p@chr17:171082..171101, + |
1.1e-40 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_494a2330a419d3616b4a6951a6166b48 | p@chr3:172384246..172384250, + |
1.1e-40 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_494a2330a419d3616b4a6951a6166b48 | p@chr3:172384246..172384250, + |
1.64e-40 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_f0ec5c1c41d309edd5216257162ba7a0 | p@chr1:45087902..45087912, + |
1.64e-40 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_f0ec5c1c41d309edd5216257162ba7a0 | p@chr1:45087902..45087912, + |
3.68e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_f4ba43e9260ab88b2e9a85db0cfc3d27 | p5@PAX2 |
3.68e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_f4ba43e9260ab88b2e9a85db0cfc3d27 | p5@PAX2 |
8.2e-37 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_9fcfc8a9d3671fb09e076f35f0f6a1ea | p6@PAX2 |
8.2e-37 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_9fcfc8a9d3671fb09e076f35f0f6a1ea | p6@PAX2 |
9.84e-37 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_fe736e0332f37adb6b3baad2760effd2 | p3@CRB2 |
9.84e-37 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_fe736e0332f37adb6b3baad2760effd2 | p3@CRB2 |
6.0e-34 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_60e0c32e4dd27a11de7496e33e5582b3 | p@chr2:113984760..113984792, + |
6.0e-34 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_60e0c32e4dd27a11de7496e33e5582b3 | p@chr2:113984760..113984792, + |
7.05e-34 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_1bd8b68e218177505f611028682bf92d | p@chr7:27164585..27164612, - |
7.05e-34 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_1bd8b68e218177505f611028682bf92d | p@chr11:555661..555679, + |
7.05e-34 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_1bd8b68e218177505f611028682bf92d | p@chr1:858638..858648, + |
7.05e-34 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_1bd8b68e218177505f611028682bf92d | p@chr7:27164585..27164612, - |
7.05e-34 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_1bd8b68e218177505f611028682bf92d | p@chr11:555661..555679, + |
7.05e-34 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_1bd8b68e218177505f611028682bf92d | p@chr1:858638..858648, + |
8.39e-34 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_bfe24ee1636b13ed40477c173e508c96 | p13@SPOCK2 |
8.39e-34 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_bfe24ee1636b13ed40477c173e508c96 | p13@SPOCK2 |
1.17e-33 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_1425b7c2d34044d18098a3fa9c062dca | p25@PHLDB1 |
1.17e-33 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_1425b7c2d34044d18098a3fa9c062dca | p25@PHLDB1 |
3.35e-32 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_6a7decac5f09e03c4251ce00223e8620 | p@chr2:693362..693373, + |
3.35e-32 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_6a7decac5f09e03c4251ce00223e8620 | p@chr2:693362..693373, + |
2.54e-31 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_5c50d74e70268a50cccc55bed36d7f00 | p1@RIPPLY1 |
2.54e-31 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_5c50d74e70268a50cccc55bed36d7f00 | p1@RIPPLY1 |
8.05e-30 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_58a27c592d12cb94c64bfa16299281cc | p@chr17:171147..171161, + |
8.05e-30 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_58a27c592d12cb94c64bfa16299281cc | p@chr17:171147..171161, + |
2.96e-29 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_8b4957fa069782265ba5c050872c27fe | p@chr2:165477405..165477418, - |
2.96e-29 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_8b4957fa069782265ba5c050872c27fe | p@chr2:165477405..165477418, - |
4.55e-29 | FFCP PHASE1:Hg19::chr1:874109..874143,+#_a5752ce7684365115a853e60cc18ffb4 | p@chr1:874109..874143, + |
4.55e-29 | FFCP PHASE2:Hg19::chr1:874109..874143,+#_a5752ce7684365115a853e60cc18ffb4 | p@chr1:874109..874143, + |
1.43e-28 | FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_e156620280e6607cec6d9afda28b75d4 | p@chr2:113999199..113999214, + |
1.43e-28 | FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_e156620280e6607cec6d9afda28b75d4 | p@chr2:113999199..113999214, + |
1.83e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_fd0de119385ca8e05f81cca8c3e8df42 | p7@LRRN4 |
1.83e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_fd0de119385ca8e05f81cca8c3e8df42 | p@chr16:86604624..86604648, + |
1.83e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_fd0de119385ca8e05f81cca8c3e8df42 | p7@LRRN4 |
1.83e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_fd0de119385ca8e05f81cca8c3e8df42 | p@chr16:86604624..86604648, + |
2.74e-27 | FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_9fc0d445f64c7ea4c36817c413083aa0 | p@chr19:56091499..56091517, - |
2.74e-27 | FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_9fc0d445f64c7ea4c36817c413083aa0 | p@chr19:56091499..56091517, - |
2.78e-26 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_b4700469f064fa5f7b46396ccd344ddc | p@chr9:112260040..112260045, + |
2.78e-26 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_b4700469f064fa5f7b46396ccd344ddc | p@chr9:112260040..112260045, + |
4.63e-26 | FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_0dd4946e3aaed816c87e4c2a0c00db6f | p@chr22:30645170..30645182, - |
4.63e-26 | FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_0dd4946e3aaed816c87e4c2a0c00db6f | p@chr22:30645170..30645182, - |
7.14e-26 | FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_ceb5293238f777f12df202751f4bd490 | p@chr8:22419319..22419327, + |
7.14e-26 | FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_ceb5293238f777f12df202751f4bd490 | p@chr8:22419319..22419327, + |
9.18e-26 | FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_8558ecb981e30539b99ede902803e9a3 | p12@TRIM16 |
9.18e-26 | FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_8558ecb981e30539b99ede902803e9a3 | p@chr8:28196820..28196830, + |
9.18e-26 | FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_8558ecb981e30539b99ede902803e9a3 | p@chr2:176973165..176973169, - |
9.18e-26 | FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_8558ecb981e30539b99ede902803e9a3 | p@chr20:6031540..6031548, - |
9.18e-26 | FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_8558ecb981e30539b99ede902803e9a3 | p14@PAX2 |
9.18e-26 | FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_8558ecb981e30539b99ede902803e9a3 | p@chr6:31833005..31833017, - |
9.18e-26 | FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_8558ecb981e30539b99ede902803e9a3 | p15@WT1 |
9.18e-26 | FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_8558ecb981e30539b99ede902803e9a3 | p12@TRIM16 |
9.18e-26 | FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_8558ecb981e30539b99ede902803e9a3 | p@chr8:28196820..28196830, + |
9.18e-26 | FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_8558ecb981e30539b99ede902803e9a3 | p@chr2:176973165..176973169, - |
9.18e-26 | FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_8558ecb981e30539b99ede902803e9a3 | p@chr20:6031540..6031548, - |
9.18e-26 | FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_8558ecb981e30539b99ede902803e9a3 | p14@PAX2 |
9.18e-26 | FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_8558ecb981e30539b99ede902803e9a3 | p@chr6:31833005..31833017, - |
9.18e-26 | FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_8558ecb981e30539b99ede902803e9a3 | p15@WT1 |
2.37e-25 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_e6e14022bdc4da83dc3289c610b1dda1 | p1@ENST00000523364, p1@uc010kux.1 |
2.37e-25 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_e6e14022bdc4da83dc3289c610b1dda1 | p1@ENST00000523364, p1@uc010kux.1 |
4.38e-25 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_51d93e19a6ee0808b5c67c263195fae4 | p16@HOXA10 |
4.38e-25 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_51d93e19a6ee0808b5c67c263195fae4 | p16@HOXA10 |
4.43e-25 | FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_59b2301e66274235993e15114eb4b011 | p6@MTMR11 |
4.43e-25 | FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_59b2301e66274235993e15114eb4b011 | p6@MTMR11 |
7.09e-25 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_64ec4d70350bf7b4dc93b4e94018a5d9 | p4@PAX2 |
7.09e-25 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_64ec4d70350bf7b4dc93b4e94018a5d9 | p4@PAX2 |
3.76e-24 | FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_ca20b62d8f5fcc0c07ba7db69c4f67b3 | p@chr1:46797583..46797614, - |
3.76e-24 | FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_ca20b62d8f5fcc0c07ba7db69c4f67b3 | p@chr1:46797583..46797614, - |
7.62e-24 | FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_fa64d7274528944a1eaf83021056dfda | p@chr6:94129519..94129544, + |
7.62e-24 | FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_fa64d7274528944a1eaf83021056dfda | p@chr6:94129519..94129544, + |
8.02e-24 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_1f8b62c014f6ae04482e3cfdf02e3b1c | p@chr2:693380..693398, + |
8.02e-24 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_1f8b62c014f6ae04482e3cfdf02e3b1c | p@chr2:693380..693398, + |
8.98e-24 | FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_db0031f319793407d2a50e5f1f44b88a | p@chr2:133426077..133426103, - |
8.98e-24 | FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_db0031f319793407d2a50e5f1f44b88a | p@chr2:133426077..133426103, - |
1.99e-23 | FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_6c078dc0c79716e49f40c07b10b73f2f | p5@WT1-AS |
1.99e-23 | FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_6c078dc0c79716e49f40c07b10b73f2f | p5@WT1-AS |
4.37e-23 | FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_b3830c91161ed78ef704014ba266a1ff | p@chr2:176968471..176968476, - |
4.37e-23 | FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_b3830c91161ed78ef704014ba266a1ff | p@chr2:176968471..176968476, - |
4.89e-23 | FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_779a71cd8eee3ea6e982217ff0a8e09b | p1@ENST00000469884 |
4.89e-23 | FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_779a71cd8eee3ea6e982217ff0a8e09b | p1@ENST00000469884 |