Personal tools

UBERON:0010349: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0010349 |name=otic capsule pre-cartilage condensation |namespace= |def= |xref=EHDAA2:0000833 |is_a=UBERON:0004121;;UBERON:0005866;;UBERON:0007524;;UB...")
 
No edit summary
 
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0001846
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Latest revision as of 13:45, 27 June 2012

Name:otic capsule pre-cartilage condensation
Xrefs:
links:
EHDAA2:0000833
Synonyms: "otic capsule anlage" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0005866(pre-cartilage condensation),UBERON:0007524(dense mesenchyme tissue),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0001846(internal ear)



Children

develops from:UBERON:0010351 (otic capsule cartilage condensation)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010349 (otic capsule pre-cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_7aa17a5425575aeb4a7514aab938a103p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_7aa17a5425575aeb4a7514aab938a103p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_7aa17a5425575aeb4a7514aab938a103p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_7aa17a5425575aeb4a7514aab938a103p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_7aa17a5425575aeb4a7514aab938a103p3@Tecta
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_7aa17a5425575aeb4a7514aab938a103p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_7aa17a5425575aeb4a7514aab938a103p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_7aa17a5425575aeb4a7514aab938a103p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_7aa17a5425575aeb4a7514aab938a103p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_7aa17a5425575aeb4a7514aab938a103p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_7aa17a5425575aeb4a7514aab938a103p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_7aa17a5425575aeb4a7514aab938a103p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_7aa17a5425575aeb4a7514aab938a103p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_7aa17a5425575aeb4a7514aab938a103p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_7aa17a5425575aeb4a7514aab938a103p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_7aa17a5425575aeb4a7514aab938a103p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_7aa17a5425575aeb4a7514aab938a103p9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_7aa17a5425575aeb4a7514aab938a103p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_7aa17a5425575aeb4a7514aab938a103p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_7aa17a5425575aeb4a7514aab938a103p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_7aa17a5425575aeb4a7514aab938a103p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_7aa17a5425575aeb4a7514aab938a103p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_7aa17a5425575aeb4a7514aab938a103p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_7aa17a5425575aeb4a7514aab938a103p4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_7aa17a5425575aeb4a7514aab938a103p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_7aa17a5425575aeb4a7514aab938a103p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_7aa17a5425575aeb4a7514aab938a103p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_7aa17a5425575aeb4a7514aab938a103p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_7aa17a5425575aeb4a7514aab938a103p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_7aa17a5425575aeb4a7514aab938a103p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_7aa17a5425575aeb4a7514aab938a103p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_7aa17a5425575aeb4a7514aab938a103p6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_7aa17a5425575aeb4a7514aab938a103p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_7aa17a5425575aeb4a7514aab938a103p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_7aa17a5425575aeb4a7514aab938a103p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_7aa17a5425575aeb4a7514aab938a103p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_7aa17a5425575aeb4a7514aab938a103p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_7aa17a5425575aeb4a7514aab938a103p2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_7aa17a5425575aeb4a7514aab938a103p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_7aa17a5425575aeb4a7514aab938a103p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_7aa17a5425575aeb4a7514aab938a103p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_7aa17a5425575aeb4a7514aab938a103p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_7aa17a5425575aeb4a7514aab938a103p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_7aa17a5425575aeb4a7514aab938a103p2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_7aa17a5425575aeb4a7514aab938a103p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_7aa17a5425575aeb4a7514aab938a103p3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_7aa17a5425575aeb4a7514aab938a103p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_7aa17a5425575aeb4a7514aab938a103p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_7aa17a5425575aeb4a7514aab938a103p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_7aa17a5425575aeb4a7514aab938a103p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_7aa17a5425575aeb4a7514aab938a103p1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_7aa17a5425575aeb4a7514aab938a103p2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_7aa17a5425575aeb4a7514aab938a103p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_7aa17a5425575aeb4a7514aab938a103p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_7aa17a5425575aeb4a7514aab938a103p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_7aa17a5425575aeb4a7514aab938a103p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_7aa17a5425575aeb4a7514aab938a103p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_7aa17a5425575aeb4a7514aab938a103p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_7aa17a5425575aeb4a7514aab938a103p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_7aa17a5425575aeb4a7514aab938a103p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_7aa17a5425575aeb4a7514aab938a103p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_7aa17a5425575aeb4a7514aab938a103p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_7aa17a5425575aeb4a7514aab938a103p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_7aa17a5425575aeb4a7514aab938a103p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_7aa17a5425575aeb4a7514aab938a103p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_7aa17a5425575aeb4a7514aab938a103p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_7aa17a5425575aeb4a7514aab938a103p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_7aa17a5425575aeb4a7514aab938a103p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_7aa17a5425575aeb4a7514aab938a103p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_7aa17a5425575aeb4a7514aab938a103p1@Gm1322

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010349&oldid=1838119"