FF:12237-129G5: Difference between revisions

Revision as of 22:38, 9 July 2012

Name:	amniotic membrane cells, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	amnion
dev stage	NA
sex	NA
age	NA
cell type	unclassifiable
cell line	NA
company	NA
collaboration	Hiroo Toyoda (Tokyo University of Pharm and life sciences)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.193
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.398
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.872
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	1.493
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.118
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.274
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.348
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.273
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.348
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.576
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	1.582
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.541
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.208
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0486
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.116
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.454
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.00103
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.545
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0291
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.316
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	1.143
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.576
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12379

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.019
MA0003.1	MA0003.1	0.788
MA0004.1	MA0004.1	0.714
MA0006.1	MA0006.1	0.315
MA0007.1	MA0007.1	0.993
MA0009.1	MA0009.1	0.779
MA0014.1	MA0014.1	0.0307
MA0017.1	MA0017.1	0.321
MA0018.2	MA0018.2	0.0458
MA0019.1	MA0019.1	0.043
MA0024.1	MA0024.1	0.0187
MA0025.1	MA0025.1	0.317
MA0027.1	MA0027.1	0.152
MA0028.1	MA0028.1	0.87
MA0029.1	MA0029.1	0.332
MA0030.1	MA0030.1	0.199
MA0031.1	MA0031.1	0.874
MA0035.2	MA0035.2	0.851
MA0038.1	MA0038.1	0.348
MA0039.2	MA0039.2	5.80705e-4
MA0040.1	MA0040.1	0.775
MA0041.1	MA0041.1	0.622
MA0042.1	MA0042.1	0.634
MA0043.1	MA0043.1	0.0361
MA0046.1	MA0046.1	0.207
MA0047.2	MA0047.2	0.548
MA0048.1	MA0048.1	0.747
MA0050.1	MA0050.1	2.48473e-6
MA0051.1	MA0051.1	4.83316e-4
MA0052.1	MA0052.1	0.491
MA0055.1	MA0055.1	0.134
MA0057.1	MA0057.1	0.892
MA0058.1	MA0058.1	0.618
MA0059.1	MA0059.1	0.621
MA0060.1	MA0060.1	0.00799
MA0061.1	MA0061.1	0.0132
MA0062.2	MA0062.2	0.00537
MA0065.2	MA0065.2	0.862
MA0066.1	MA0066.1	0.489
MA0067.1	MA0067.1	0.153
MA0068.1	MA0068.1	0.738
MA0069.1	MA0069.1	0.287
MA0070.1	MA0070.1	0.313
MA0071.1	MA0071.1	0.509
MA0072.1	MA0072.1	0.34
MA0073.1	MA0073.1	0.89
MA0074.1	MA0074.1	0.857
MA0076.1	MA0076.1	0.154
MA0077.1	MA0077.1	0.0792
MA0078.1	MA0078.1	0.969
MA0079.2	MA0079.2	0.208
MA0080.2	MA0080.2	9.41079e-11
MA0081.1	MA0081.1	0.00581
MA0083.1	MA0083.1	0.0098
MA0084.1	MA0084.1	0.223
MA0087.1	MA0087.1	0.855
MA0088.1	MA0088.1	0.411
MA0090.1	MA0090.1	1.00176e-7
MA0091.1	MA0091.1	0.538
MA0092.1	MA0092.1	0.26
MA0093.1	MA0093.1	0.665
MA0099.2	MA0099.2	4.93384e-8
MA0100.1	MA0100.1	0.37
MA0101.1	MA0101.1	3.25219e-4
MA0102.2	MA0102.2	0.0622
MA0103.1	MA0103.1	3.07614e-7
MA0104.2	MA0104.2	0.258
MA0105.1	MA0105.1	0.362
MA0106.1	MA0106.1	0.439
MA0107.1	MA0107.1	3.42055e-5
MA0108.2	MA0108.2	0.896
MA0111.1	MA0111.1	0.785
MA0112.2	MA0112.2	0.54
MA0113.1	MA0113.1	0.0247
MA0114.1	MA0114.1	0.737
MA0115.1	MA0115.1	0.774
MA0116.1	MA0116.1	0.799
MA0117.1	MA0117.1	0.586
MA0119.1	MA0119.1	0.475
MA0122.1	MA0122.1	0.204
MA0124.1	MA0124.1	0.591
MA0125.1	MA0125.1	0.214
MA0131.1	MA0131.1	0.903
MA0135.1	MA0135.1	0.342
MA0136.1	MA0136.1	6.42326e-8
MA0137.2	MA0137.2	0.0984
MA0138.2	MA0138.2	0.585
MA0139.1	MA0139.1	0.618
MA0140.1	MA0140.1	0.628
MA0141.1	MA0141.1	0.149
MA0142.1	MA0142.1	0.979
MA0143.1	MA0143.1	0.577
MA0144.1	MA0144.1	0.559
MA0145.1	MA0145.1	0.18
MA0146.1	MA0146.1	0.00431
MA0147.1	MA0147.1	0.497
MA0148.1	MA0148.1	0.392
MA0149.1	MA0149.1	0.89
MA0150.1	MA0150.1	0.459
MA0152.1	MA0152.1	0.242
MA0153.1	MA0153.1	0.737
MA0154.1	MA0154.1	0.681
MA0155.1	MA0155.1	0.337
MA0156.1	MA0156.1	6.85892e-8
MA0157.1	MA0157.1	0.601
MA0159.1	MA0159.1	0.498
MA0160.1	MA0160.1	0.665
MA0162.1	MA0162.1	0.354
MA0163.1	MA0163.1	0.993
MA0164.1	MA0164.1	0.145
MA0258.1	MA0258.1	0.387
MA0259.1	MA0259.1	0.536

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12379

Novel motif	Logo	P-value
1	1	0.482
10	10	0.43
100	100	0.496
101	101	0.52
102	102	0.628
103	103	0.0904
104	104	0.548
105	105	0.358
106	106	0.999
107	107	0.781
108	108	0.129
109	109	0.00101
11	11	0.779
110	110	0.19
111	111	0.422
112	112	0.989
113	113	5.26573e-4
114	114	0.496
115	115	0.909
116	116	0.0955
117	117	0.0149
118	118	0.00199
119	119	0.784
12	12	0.872
120	120	0.183
121	121	0.291
122	122	0.788
123	123	0.046
124	124	0.0398
125	125	0.973
126	126	0.683
127	127	0.934
128	128	0.402
129	129	0.317
13	13	0.41
130	130	0.112
131	131	0.0188
132	132	0.26
133	133	0.0123
134	134	0.0413
135	135	0.504
136	136	0.0132
137	137	0.217
138	138	0.871
139	139	0.405
14	14	0.933
140	140	0.177
141	141	0.653
142	142	0.783
143	143	0.254
144	144	0.615
145	145	0.569
146	146	0.202
147	147	0.984
148	148	0.43
149	149	0.382
15	15	0.789
150	150	0.766
151	151	0.108
152	152	0.0976
153	153	0.961
154	154	0.589
155	155	0.0167
156	156	0.204
157	157	0.564
158	158	0.17
159	159	0.858
16	16	0.0773
160	160	0.155
161	161	0.462
162	162	0.806
163	163	0.0819
164	164	0.124
165	165	0.345
166	166	0.79
167	167	0.894
168	168	0.617
169	169	0.02
17	17	0.423
18	18	0.809
19	19	0.678
2	2	0.207
20	20	0.215
21	21	0.244
22	22	0.0921
23	23	0.169
24	24	0.722
25	25	0.388
26	26	0.982
27	27	0.698
28	28	0.783
29	29	0.0817
3	3	0.262
30	30	0.252
31	31	0.928
32	32	0.906
33	33	0.526
34	34	0.0469
35	35	0.0468
36	36	0.0624
37	37	0.538
38	38	0.273
39	39	0.365
4	4	0.689
40	40	0.497
41	41	0.932
42	42	0.7
43	43	0.275
44	44	0.969
45	45	0.27
46	46	0.68
47	47	0.689
48	48	0.887
49	49	0.555
5	5	0.992
50	50	0.725
51	51	0.491
52	52	0.552
53	53	0.292
54	54	0.985
55	55	0.571
56	56	0.3
57	57	0.864
58	58	0.929
59	59	0.559
6	6	0.509
60	60	0.878
61	61	0.57
62	62	0.994
63	63	0.567
64	64	0.518
65	65	0.87
66	66	0.561
67	67	0.823
68	68	0.944
69	69	0.0667
7	7	0.588
70	70	0.0536
71	71	0.888
72	72	0.216
73	73	0.0813
74	74	0.131
75	75	0.042
76	76	0.406
77	77	0.212
78	78	0.523
79	79	0.8
8	8	0.572
80	80	0.497
81	81	0.771
82	82	0.979
83	83	0.978
84	84	0.31
85	85	0.0861
86	86	0.536
87	87	0.547
88	88	0.702
89	89	0.0865
9	9	0.945
90	90	0.583
91	91	0.302
92	92	0.966
93	93	0.528
94	94	0.879
95	95	0.464
96	96	0.425
97	97	0.143
98	98	0.387
99	99	0.641

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12379

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000010 human amniotic membrane cell- Amnion sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002537 (amnion mesenchymal stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000305 (amnion)
0002384 (connective tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0005631 (extraembryonic membrane)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0000158 (membranous layer)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000092 (human amniotic membrane cell sample)
0000101 (sample by species)
0000001 (sample)
0000010 (human amniotic membrane cell- Amnion sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr3:111314186..111314204,-!p1@ZBED2!2.68!475.48!ZBED2;;chr10:8096631..8096660,+!p1@GATA3!2.21!194.74!GATA3;;chr5:153857778..153857794,-!p1@HAND1!2.11!128.70!HAND1;;chr19:46801639..46801699,+!p1@HIF3A!1.95!88.16!HIF3A;;chr19:45971246..45971265,+!p1@FOSB!1.94!1511.23!FOSB;;chr6:19837592..19837621,+!p1@ID4!1.93!490.54!ID4;;chr2:19558373..19558392,-!p1@OSR1!1.90!207.03!OSR1;;chr20:39317868..39317884,-!p1@MAFB!1.85!781.11!MAFB;;chr4:188916918..188916942,+!p1@ZFP42!1.83!66.35!ZFP42;;chr3:111314230..111314241,-!p2@ZBED2!1.71!50.07!ZBED2;;chr17:7493405..7493419,-!p1@SOX15!1.68!47.00!SOX15;;chr1:209979467..209979494,-!p1@IRF6!1.67!50.99!IRF6;;chr1:38512457..38512474,-!p1@POU3F1!1.64!46.38!POU3F1;;chr12:52445218..52445237,+!p1@NR4A1!1.60!463.81!NR4A1;;chr9:110252035..110252057,-!p1@KLF4!1.58!565.79!KLF4;;chr10:8096772..8096787,+!p2@GATA3!1.58!43.62!GATA3;;chr1:212782094..212782109,+!p1@ATF3!1.55!899.37!ATF3;;chr11:65554528..65554546,+!p1@OVOL1!1.55!34.40!OVOL1;;chr8:102504651..102504683,+!p1@GRHL2!1.53!33.17!GRHL2;;chr6:10415276..10415341,-!p2@TFAP2A!1.49!36.24!TFAP2A;;chr5:2751762..2751784,-!p1@IRX2!1.49!29.79!IRX2;;chr3:32023232..32023273,+!p1@ZNF860!1.48!41.16!ZNF860;;chr20:55204351..55204377,+!p1@TFAP2C!1.48!37.17!TFAP2C;;chr5:153857800..153857812,-!p2@HAND1!1.48!29.18!HAND1;;chr14:75745523..75745537,+!p1@FOS!1.46!3173.28!FOS;;chr1:2461692..2461710,-!p1@HES5!1.46!27.95!HES5;;chr2:238592039..238592054,+!p4@LRRFIP1!1.45!27.34!LRRFIP1;;chr6:85474299..85474324,-!p1@TBX18!1.44!46.38!TBX18;;chr13:73633131..73633149,+!p1@KLF5!1.40!246.04!KLF5;;chr9:110251836..110251887,-!p4@KLF4!1.39!30.72!KLF4;;chr1:201979743..201979762,+!p1@ELF3!1.36!21.81!ELF3;;chr6:85473156..85473210,-!p2@TBX18!1.33!24.88!TBX18;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.33!20.58!PEG3;;chr4:174450089..174450153,-!p2@HAND2!1.32!19.97!HAND2;;chr4:174451370..174451387,-!p1@HAND2!1.30!18.74!HAND2;;chr6:10419768..10419819,-!p6@TFAP2A!1.29!18.43!TFAP2A;;chr2:46524897..46524911,+!p2@EPAS1!1.28!50.37!EPAS1;;chr13:45010939..45011033,-!p1@TSC22D1!1.26!1087.35!TSC22D1;;chr6:10412600..10412637,-!p1@TFAP2A!1.25!27.64!TFAP2A;;chr10:8095593..8095625,+!p3@GATA3!1.25!19.66!GATA3;;chr6:10415484..10415508,-!p3@TFAP2A!1.25!16.59!TFAP2A;;chr7:1577899..1577943,+!p3@MAFK!1.23!15.97!MAFK;;chr8:102504690..102504704,+!p3@GRHL2!1.23!15.97!GRHL2;;chr17:80797886..80797906,-!p1@ZNF750!1.21!15.36!ZNF750;;chr11:65554563..65554576,+!p2@OVOL1!1.20!14.74!OVOL1;;chr17:38256799..38256815,-!p3@NR1D1!1.19!26.11!NR1D1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.18!123.17!PPP1R13L;;chrX:56258844..56258882,+!p1@KLF8!1.18!19.35!KLF8;;chrX:107018969..107019024,-!p6@TSC22D3!1.17!19.04!TSC22D3;;chr17:38256822..38256851,-!p1@NR1D1!1.16!105.36!NR1D1;;chr9:110250697..110250738,-!p2@KLF4!1.16!15.97!KLF4;;chrY:21906594..21906622,-!p1@KDM5D!1.16!13.52!KDM5D;;chr1:201979703..201979721,+!p2@ELF3!1.15!13.21!ELF3;;chr6:10419824..10419840,-!p9@TFAP2A!1.12!12.29!TFAP2A;;chr3:71630690..71630750,-!p11@FOXP1!1.11!19.97!FOXP1;;chr21:36260773..36260804,-!p7@RUNX1!1.11!15.97!RUNX1;;chr14:75746722..75746777,+!p2@FOS!1.11!15.36!FOS;;chr5:2751785..2751808,-!p2@IRX2!1.11!11.98!IRX2;;chr16:31076332..31076388,-!p3@ZNF668!1.10!11.67!ZNF668;;chr8:102504979..102505010,+!p2@GRHL2!1.09!11.36!GRHL2;;chr2:16080659..16080685,+!p1@MYCN!1.08!11.06!MYCN;;chr6:12008986..12009016,+!p3@HIVEP1!1.05!32.25!HIVEP1;;chr17:48072574..48072597,-!p1@DLX3!1.05!10.14!DLX3;;chr1:209979411..209979433,-!p2@IRF6!1.05!10.14!IRF6;;chr2:214015343..214015366,-!p3@IKZF2!1.05!10.14!IKZF2;;chr7:1577111..1577132,+!p4@MAFK!1.03!11.06!MAFK;;chr1:23694556..23694584,-!p6@ZNF436!1.02!12.29!ZNF436;;chr2:5832508..5832524,+!p1@SOX11!1.02!9.52!SOX11;;chr16:73082004..73082033,-!p5@ZFHX3!1.01!15.05!ZFHX3;;chr2:10091815..10091864,+!p1@GRHL1!1.00!11.98!GRHL1;;chr5:153857819..153857824,-!p3@HAND1!1.00!8.91!HAND1;;chr3:39195037..39195069,-!p2@CSRNP1!0.99!55.90!CSRNP1;;chr17:7492684..7492778,-!p2@SOX15!0.99!19.04!SOX15;;chr14:75988771..75988826,+!p1@BATF!0.99!11.67!BATF;;chr19:21203481..21203504,+!p2@ZNF430!0.98!20.27!ZNF430;;chr19:45579725..45579743,-!p1@ZNF296!0.97!38.70!ZNF296;;chr8:57123815..57123867,-!p1@PLAG1!0.97!35.02!PLAG1;;chr15:60884706..60884743,-!p1@RORA!0.96!43.00!RORA;;chr9:110252074..110252079,-!p3@KLF4!0.96!13.52!KLF4;;chr19:22193731..22193751,-!p1@ZNF208!0.95!7.99!ZNF208;;chrY:2803415..2803468,+!p1@ZFY!0.95!7.99!ZFY;;chr12:53625966..53626012,-!p2@RARG!0.94!21.19!RARG;;chr10:48355030..48355090,+!p1@ZNF488!0.94!10.14!ZNF488;;chr3:141087454..141087465,+!p19@ZBTB38!0.94!7.68!ZBTB38;;chr5:137804484..137804498,+!p2@EGR1!0.93!31.02!EGR1;;chr1:59249707..59249727,-!p1@JUN!0.92!323.44!JUN;;chr19:11925071..11925113,+!p1@ZNF440!0.92!55.29!ZNF440;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.92!7.37!ZNF676;;chr10:8100691..8100732,+!p5@GATA3!0.89!6.76!GATA3;;chr1:209979449..209979460,-!p3@IRF6!0.89!6.76!IRF6;;chr16:67881588..67881612,-!p2@CENPT!0.88!9.21!CENPT;;chr5:137801160..137801176,+!p1@EGR1!0.87!673.91!EGR1;;chr20:18038521..18038571,-!p1@OVOL2!0.87!6.45!OVOL2;;chr4:149363494..149363543,-!p1@NR3C2!0.87!6.45!NR3C2;;chr8:49833978..49833996,-!p1@SNAI2!0.85!132.39!SNAI2;;chr6:144329384..144329405,-!p1@PLAGL1!0.85!74.64!PLAGL1;;chr12:51157744..51157796,+!p2@ATF1!0.85!44.85!ATF1;;chr1:204042233..204042249,+!p1@SOX13!0.85!41.16!SOX13;;chr11:2292226..2292270,-!p1@ASCL2!0.85!6.14!ASCL2;;chr8:102504932..102504952,+!p4@GRHL2!0.85!6.14!GRHL2;;chr8:81787006..81787031,-!p2@ZNF704!0.85!6.14!ZNF704;;chr10:111985713..111985774,+!p2@MXI1!0.84!60.82!MXI1;;chr2:238600933..238600985,+!p3@LRRFIP1!0.84!34.09!LRRFIP1;;chr19:12175535..12175554,+!p1@ZNF844!0.83!33.48!ZNF844;;chr19:17356189..17356221,-!p2@NR2F6!0.83!9.83!NR2F6;;chr18:6414884..6414942,-!p1@L3MBTL4!0.83!7.37!L3MBTL4;;chr5:3595961..3595975,+!p3@IRX1!0.83!5.84!IRX1;;chr5:137804405..137804444,+!p3@EGR1!0.82!6.76!EGR1;;chr9:2015335..2015370,+!p1@SMARCA2!0.81!71.57!SMARCA2;;chr1:59249732..59249749,-!p2@JUN!0.81!71.26!JUN;;chr13:41593425..41593480,-!p1@ELF1!0.81!37.17!ELF1;;chr6:12012536..12012554,+!p4@HIVEP1!0.81!13.82!HIVEP1;;chr9:102584159..102584174,+!p2@NR4A3!0.81!10.14!NR4A3;;chr12:10870927..10870966,-!p5@CSDA!0.81!5.53!CSDA;;chrX:107019163..107019179,-!p7@TSC22D3!0.80!6.14!TSC22D3;;chrX:106960285..106960299,-!p1@TSC22D3!0.79!150.82!TSC22D3;;chr8:49833948..49833973,-!p2@SNAI2!0.79!35.32!SNAI2;;chr3:170075103..170075114,+!p5@SKIL!0.79!7.06!SKIL;;chrX:56258885..56258896,+!p5@KLF8!0.79!5.22!KLF8;;chr19:45977993..45978005,+!p6@FOSB!0.79!5.22!FOSB;;chr10:8097321..8097348,+!p4@GATA3!0.79!5.22!GATA3;;chr14:75745247..75745251,+!p14@FOS!0.79!5.22!FOS;;chr5:3595977..3595999,+!p1@IRX1!0.79!5.22!IRX1;;chr16:30102849..30102865,-!p2@TBX6!0.79!5.22!TBX6;;chr19:21579908..21579949,+!p1@ZNF493!0.78!33.17!ZNF493;;chr19:11959532..11959593,+!p1@ZNF439!0.78!20.89!ZNF439;;chr3:71630980..71631110,-!p3@FOXP1!0.78!19.04!FOXP1;;chr3:71631382..71631413,-!p20@FOXP1!0.78!5.84!FOXP1;;chr1:59249688..59249703,-!p3@JUN!0.77!31.94!JUN;;chr11:113930291..113930339,+!p2@ZBTB16!0.77!8.29!ZBTB16;;chr19:46806868..46806883,+!p3@HIF3A!0.77!4.91!HIF3A;;chr5:3595934..3595957,+!p2@IRX1!0.77!4.91!IRX1;;chr7:101460882..101460923,+!p5@CUX1!0.77!4.91!CUX1;;chr17:70117153..70117174,+!p1@SOX9!0.76!53.75!SOX9;;chr19:12405606..12405629,-!p2@ZNF44!0.76!9.83!ZNF44;;chr13:73636516..73636532,+!p3@KLF5!0.76!5.53!KLF5;;chr6:144329500..144329526,-!p4@PLAGL1!0.75!11.67!PLAGL1;;chr10:77161650..77161661,-!p4@ZNF503!0.75!6.76!ZNF503;;chr17:46622440..46622477,-!p5@HOXB2!0.75!5.22!HOXB2;;chr14:75746781..75746799,+!p6@FOS!0.75!4.61!FOS;;chr7:63505799..63505904,+!p1@ZNF727!0.75!4.61!ZNF727;;chr2:169312725..169312810,+!p1@CERS6!0.74!122.86!CERS6;;chr15:60884747..60884774,-!p3@RORA!0.74!11.98!RORA;;chr5:139487608..139487663,+!p3@PURA!0.73!10.14!PURA;;chr19:45260775..45260838,+!p5@BCL3!0.73!5.84!BCL3;;chr5:137804357..137804390,+!p4@EGR1!0.73!5.22!EGR1;;chr21:40177845..40177863,+!p1@ETS2!0.72!287.50!ETS2;;chr2:28615716..28615733,+!p1@FOSL2!0.72!226.38!FOSL2;;chr4:26322419..26322479,+!p2@RBPJ!0.72!58.05!RBPJ;;chr3:128206762..128206781,-!p2@GATA2!0.72!29.49!GATA2;;chr19:21324863..21324874,+!p2@ZNF431!0.72!7.99!ZNF431;;chr2:19558327..19558334,-!p2@OSR1!0.72!4.30!OSR1;;chr1:23694532..23694549,-!p8@ZNF436!0.72!4.30!ZNF436;;chr19:12902289..12902307,+!p1@JUNB!0.71!1066.77!JUNB;;chr10:3824332..3824425,-!p4@KLF6!0.71!7.06!KLF6;;chr6:12009042..12009092,+!p6@HIVEP1!0.71!5.53!HIVEP1;;chr2:101436564..101436647,+!p1@NPAS2!0.70!92.76!NPAS2;;chr4:38665810..38665827,+!p1@KLF3!0.70!66.04!KLF3;;chr19:53193731..53193767,-!p1@ZNF83!0.70!40.55!ZNF83;;chr2:157189180..157189290,-!p1@NR4A2!0.70!23.65!NR4A2;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.70!12.59!ZNF525;;chr19:45977759..45977770,+!p10@FOSB!0.70!3.99!FOSB;;chr19:46800289..46800327,+!p2@HIF3A!0.70!3.99!HIF3A;;chr2:191906489..191906517,-!p6@STAT4!0.70!3.99!STAT4;;chr4:149365827..149365870,-!p5@NR3C2!0.70!3.99!NR3C2;;chrX:56258900..56258917,+!p4@KLF8!0.70!3.99!KLF8;;chr19:22605136..22605154,-!p1@ZNF98!0.70!3.99!ZNF98;;chr18:45456930..45456967,-!p2@SMAD2!0.69!24.88!SMAD2;;chr3:141087393..141087426,+!p3@ZBTB38!0.69!17.20!ZBTB38;;chr22:41777927..41777971,+!p1@TEF!0.68!36.24!TEF;;chr19:6110474..6110551,-!p1@RFX2!0.68!26.11!RFX2;;chr10:43134001..43134026,-!p1@ZNF33B!0.68!19.04!ZNF33B;;chr19:52391147..52391218,-!p1@ZNF577!0.68!13.21!ZNF577;;chr19:53636125..53636178,-!p1@ZNF415!0.68!11.98!ZNF415;;chr4:38665769..38665801,+!p2@KLF3!0.67!38.09!KLF3;;chr20:45142154..45142227,-!p1@ZNF334!0.67!7.99!ZNF334;;chr19:45974146..45974170,+!p7@FOSB!0.67!3.69!FOSB;;chr4:149363475..149363492,-!p2@NR3C2!0.67!3.69!NR3C2;;chr10:3824646..3824677,-!p9@KLF6!0.67!3.69!KLF6;;chr16:67198633..67198671,+!p1@HSF4!0.67!3.69!HSF4;;chr17:45928521..45928539,-!p1@SP6!0.67!3.69!SP6;;chr5:121465234..121465263,+!p1@ZNF474!0.67!3.69!ZNF474;;chr1:157108130..157108173,-!p1@ETV3!0.66!29.79!ETV3;;chr13:74708504..74708549,-!p1@KLF12!0.66!18.43!KLF12;;chr17:7382856..7382889,-!p3@ZBTB4!0.66!16.28!ZBTB4;;chr14:64970427..64970457,+!p3@ZBTB1!0.66!7.68!ZBTB1;;chr6:120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!SMARCAL1;;chr19:19516543..19516559,+!p6@GATAD2A!0.24!4.30!GATAD2A;;chr19:23870007..23870022,-!p2@ZNF675!0.24!4.30!ZNF675;;chr10:51565156..51565167,+!p5@NCOA4!0.24!4.30!NCOA4;;chr9:73029219..73029289,-!p2@KLF9!0.24!3.99!KLF9;;chr19:37341752..37341816,+!p1@ZNF345!0.24!3.99!ZNF345;;chr19:37958318..37958365,-!p2@ZNF569!0.24!3.38!ZNF569;;chr12:104531785..104531812,-!p3@NFYB!0.24!3.38!NFYB;;chr5:178450797..178450814,+!p1@ZNF879!0.24!3.38!ZNF879;;chr19:58071166..58071189,-!p2@ZNF550!0.24!3.07!ZNF550;;chr1:33004734..33004807,+!p2@ZBTB8A!0.24!2.15!ZBTB8A;;chr13:46543725..46543747,-!p2@ZC3H13!0.24!2.15!ZC3H13;;chr19:12476469..12476509,-!p2@ZNF442!0.24!1.84!ZNF442;;chr19:37997812..37997866,+!p1@ZNF793!0.24!1.84!ZNF793;;chr18:51751066..51751077,-!p6@MBD2!0.24!1.54!MBD2;;chr6:91006575..91006602,-!p2@BACH2!0.24!1.54!BACH2;;chr19:44037334..44037365,+!p2@ZNF575!0.24!1.54!ZNF575;;chr19:52531585..52531596,-!p2@ZNF614!0.24!1.23!ZNF614;;chr1:164528297..164528309,+!p9@PBX1!0.24!1.23!PBX1;;chr12:51611888..51611917,-!p3@POU6F1!0.24!0.92!POU6F1;;chr16:69419724..69419735,-!p4@TERF2!0.24!0.92!TERF2;;chr19:20748620..20748630,-!p3@ZNF737!0.24!0.92!ZNF737;;chr4:106157017..106157029,+!p7@TET2!0.24!0.92!TET2;;chr15:35280439..35280503,-!p1@ZNF770!0.23!53.14!ZNF770;;chr11:118307179..118307223,+!p1@MLL!0.23!46.38!MLL;;chr19:36706024..36706049,+!p1@ZNF146!0.23!26.72!ZNF146;;chr18:47807845..47807918,-!p1@MBD1!0.23!26.42!MBD1;;chr3:141121164..141121249,+!p1@ZBTB38!0.23!25.80!ZBTB38;;chr19:57791806..57791875,+!p1@ZNF460!0.23!18.43!ZNF460;;chr19:57791328..57791377,+!p2@ZNF460!0.23!18.12!ZNF460;;chr9:73028814..73028895,-!p1@KLF9!0.23!14.74!KLF9;;chr17:36861496..36861586,+!p1@MLLT6!0.23!14.13!MLLT6;;chr19:37064145..37064216,-!p1@ZNF529!0.23!12.29!ZNF529;;chr16:1464688..1464728,-!p1@UNKL!0.23!9.83!UNKL;;chr19:21264991..21265026,+!p1@ZNF714!0.23!9.52!ZNF714;;chr13:27998831..27998851,+!p2@GTF3A!0.23!8.60!GTF3A;;chr21:27107259..27107299,+!p1@GABPA!0.23!8.29!GABPA;;chr6:108882109..108882173,+!p2@FOXO3!0.23!7.68!FOXO3;;chr6:157100031..157100112,+!p2@ARID1B!0.23!7.68!ARID1B;;chr19:59084647..59084721,-!p1@MZF1!0.23!6.76!MZF1;;chr19:12251144..12251181,-!p2@ZNF20!0.23!5.84!ZNF20;;chr5:178157651..178157689,-!p1@ZNF354A!0.23!5.53!ZNF354A;;chr7:148892581..148892604,+!p3@ZNF282!0.23!3.99!ZNF282;;chr5:139493727..139493766,+!p4@PURA!0.23!3.69!PURA;;chr19:52674853..52674892,-!p2@ZNF836!0.23!3.38!ZNF836;;chr14:35872962..35873025,-!p3@NFKBIA!0.23!3.07!NFKBIA;;chr15:74833584..74833626,+!p1@ARID3B!0.23!2.76!ARID3B;;chr12:80084862..80084884,-!p7@PAWR!0.23!2.46!PAWR;;chr1:249153114..249153175,-!p3@ZNF692!0.23!2.15!ZNF692;;chr1:26496459..26496470,+!p2@ZNF593!0.23!2.15!ZNF593;;chr20:25677399..25677433,-!p3@ZNF337!0.23!2.15!ZNF337;;chr19:58666441..58666478,-!p2@ZNF329!0.23!1.84!ZNF329;;chr6:12012249..12012266,+!p5@HIVEP1!0.23!1.84!HIVEP1;;chr9:4300016..4300039,-!p2@GLIS3!0.23!1.84!GLIS3;;chr19:44669280..44669294,+!p4@ZNF226,p4@ZNF234!0.23!1.54!ZNF226;;chr19:56111614..56111634,+!p3@ZNF524!0.23!1.54!ZNF524;;chr19:57078972..57079027,+!p2@ZNF470!0.23!1.54!ZNF470;;chr1:164528588..164528610,+!p8@PBX1!0.23!1.54!PBX1;;chr1:247095162..247095173,-!p3@AHCTF1!0.23!1.54!AHCTF1;;chr15:57025812..57025819,-!p4@ZNF280D!0.23!1.54!ZNF280D;;chr17:38256858..38256866,-!p6@NR1D1!0.23!1.23!NR1D1;;chr18:56531584..56531646,+!p4@ZNF532!0.23!1.23!ZNF532;;chr3:14988878..14988903,+!p7@NR2C2!0.23!1.23!NR2C2;;chr6:35227247..35227280,+!p3@ZNF76!0.23!1.23!ZNF76;;chr11:12696071..12696086,+!p3@TEAD1!0.23!1.23!TEAD1;;chr12:133613902..133613924,+!p4@ZNF84!0.23!1.23!ZNF84;;chr10:3824229..3824253,-!p7@KLF6!0.23!0.92!KLF6;;chr16:69727150..69727178,+!p7@NFAT5!0.23!0.92!NFAT5;;chr18:56530595..56530606,+!p11@ZNF532!0.23!0.92!ZNF532;;chr19:20844356..20844365,-!p3@ZNF626!0.23!0.92!ZNF626;;chr1:8938736..8938756,-!p1@ENO1!0.22!1646.38!ENO1;;chr9:33290491..33290564,+!p1@NFX1!0.22!54.98!NFX1;;chr13:46626847..46626899,-!p1@ZC3H13!0.22!46.38!ZC3H13;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:12237-129G5: Difference between revisions

From FANTOM5_SSTAR

Revision as of 22:38, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0