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MacroAPE 1083:12-TGCAGTNTTT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;160.512;99.968;181.632;965.888!2;50.688;70.4;1039.104;247.808!3;1.408;1403.776;1.408;1.408!4;877.184;1.408;223.872;305.536!5;81.664;1.408;13...")
 
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9!10717-109I6;0.0489782!10455-106G5;0.123269!10534-107G3;0.392948!10429-106D6;0.0812336!10464-106H5;0.0704642!10827-111C8;0.266674!10789-110H6;0.129091!10828-111C9;0.0455627!10788-110H5;0.119616!10792-110H9;0.00137716!10765-110E9;0.0192431!10829-111D1;0.00291823!10830-111D2;0.0192972!10831-111D3;0.0399693!10832-111D4;0.246196!10833-111D5;0.0343177!10764-110E8;0.0223569!10770-110F5;0.00307815!10399-106A3;0.303507!10400-106A4;0.0304066!10405-106A9;0.0225811!10834-111D6;0.0134687!10835-111D7;0.107061!10836-111D8;0.154223!10837-111D9;0.112179!10699-109G6;0.0651401!10802-111A1;0.104334!10796-110I4;0.00538686!10010-101C1;0.041293!10810-111A9;0.637868!10421-106C7;0.601969!10708-109H6;0.259663!12235-129G3;0.0350573!12236-129G4;0.577225!12237-129G5;0.63334!10167-103B5;0.735966!10151-102I7;6.07898e-05!10428-106D5;0.00061796!10795-110I3;0.405271!10805-111A4;0.127612!10052-101G7;0.125795!10189-103D9;0.116052!10589-108D4;0.499915!10425-106D2;0.24972!10427-106D4;0.880917!10702-109G9;0.425578!10432-106D9;0.134633!10496-107C1;0.000249109!10718-109I7;0.0547845!10011-101C2;0.0509708!10053-101G8;0.165441!10686-109F2;0.164532!10084-102B3;0.400232!10012-101C3;0.000782032!10085-102B4;4.98434e-05!10482-107A5;0.0376815!10419-106C5;0.0145196!10080-102A8;0.162288!10760-110E4;0.539101!10709-109H7;0.0485794!10710-109H8;0.0137918!10703-109H1;0.112639!10719-109I8;0.792344!10642-109A3;0.776911!10177-103C6;0.694139!10164-103B2;0.00083216!10173-103C2;0.0025342!10166-103B4;0.00369048!10083-102B2;0.00198181!10188-103D8;0.00267258!10552-107I3;0.000125048!10553-107I4;0.0710391!10013-101C4;0.0249683!10536-107G5;0.352111!10618-108G6;0.404277!10423-106C9;0.0602395!10785-110H2;0.0439055!12238-129G6;0.0140202!12239-129G7;0.621072!12240-129G8;0.493109!10416-106C2;0.924054!10801-110I9;0.0911446!10766-110F1;0.0708496!10824-111C5;0.0300333!10825-111C6;0.156129!10826-111C7;0.116574!10454-106G4;0.14506!10409-106B4;0.052996!10638-108I8;0.035253!10636-108I6;0.027483!10513-107D9;0.0635881!10420-106C6;0.0594564!10082-102B1;0.322766!10014-101C5;0.708326!10070-101I7;0.497767!10452-106G2;0.737512!10453-106G3;0.918902!10449-106F8;0.971766!10042-101F6;0.906337!10069-101I6;0.00352466!10193-103E4;0.840662!10631-108I1;0.000353934!10438-106E6;0.514104!10488-107B2;0.0241454!10196-103E7;0.192817!10071-101I8;0.474878!10071-101I8;0.73054!10041-101F5;0.0396635!10451-106G1;0.0472175!10450-106F9;0.30507!10604-108F1;0.439648!10605-108F2;0.0614811!10606-108F3;0.0275657!10603-108E9;0.0973075!10497-107C2;0.0271825!10448-106F7;0.127246!10643-109A4;0.51804!10426-106D3;0.436735!10431-106D8;0.0947418!10197-103E8;0.269692!10443-106F2;0.164448!10815-111B5;0.0982972!10816-111B6;0.010366!10817-111B7;0.0066108!10015-101C6;0.0105857!10410-106B5;0.704167!10054-101G9;0.392752!10758-110E2;0.0275692!10711-109H9;0.910486!10040-101F4;0.0450233!10470-106I2;7.4906e-05!10415-106C1;0.00829173!10198-103E9;0.0304915!10614-108G2;0.316104!10612-108F9;0.183227!10549-107H9;0.00134144!10615-108G3;0.278248!10487-107B1;0.833844!10433-106E1;0.0242792!10688-109F4;0.0145754!10444-106F3;0.153453!10444-106F3;0.0503318!10485-107A8;0.0342781!10413-106B8;0.6944!10175-103C4;0.201193!10161-103A8;0.00106328!12131-128D7;0.00466446!10624-108H3;0.0564162!10712-109I1;0.991763!10205-103F7;0.761913!10206-103F8;0.0725148!10207-103F9;0.0946621!10050-101G5;0.401816!10051-101G6;0.844023!10016-101C7;0.43444!10046-101G1;0.230922!10778-110G4;0.250149!10633-108I3;0.185871!10818-111B8;0.0726407!10819-111B9;0.0294941!10820-111C1;0.030336!10484-107A7;0.0249634!10808-111A7;0.319007!10169-103B7;0.299717!10153-102I9;0.000160626!13425-144D5;0.000610371!13433-144E4;0.396088!13437-144E8;0.34269!11904-125F5;0.419688!11905-125F6;0.179776!10039-101F3;0.0957521!10791-110H8;0.000161321!10017-101C8;0.0438807!10045-101F9;0.446275!10509-107D5;0.566811!10839-111E2;0.0226547!10692-109F8;0.427278!10079-102A7;0.266142!10078-102A6;0.113194!10721-110A1;0.315123!10569-108B2;0.0304343!10570-108B3;0.229642!10571-108B4;0.137662!10647-109A8;0.0272003!10752-110D5;0.476656!10782-110G8;0.049935!10726-110A6;0.0152003!10018-101C9;0.195181!10086-102B5;0.170862!10182-103D2;0.258109!10165-103B3;0.00071577!10499-107C4;0.000537141!10408-106B3;0.0873932!10019-101D1;0.000369519!10068-101I5;0.827199!10075-102A3;0.586948!10077-102A5;0.923407!10727-110A7;0.858696!10775-110G1;0.943099!10412-106B7;0.296274!12231-129F8;0.121275!12232-129F9;0.769331!12233-129G1;0.279089!12234-129G2;0.514065!10414-106B9;0.758344!10170-103B8;0.0604249!10183-103D3;3.9313e-05!10150-102I6;4.3473e-05!10174-103C3;0.000228699!10155-103A2;0.00197629!10038-101F2;0.00120435!10838-111E1;0.000862972!10759-110E3;0.386858!10514-107E1;0.297544!10465-106H6;0.138504!10691-109F7;0.455392!10843-111E6;0.52792!10844-111E7;0.490782!11747-123G1;0.729938!11748-123G2;0.559727!11749-123G3;0.420233!11750-123G4;0.460966!11751-123G5;0.0717868!11840-124H4;0.113804!11752-123G6;0.291572!11753-123G7;0.834503!11754-123G8;0.520542!11755-123G9;0.966519!11756-123H1;0.647877!11833-124G6;0.393834!11760-123H5;0.398989!11836-124G9;0.645759!11758-123H3;0.560099!11835-124G8;0.359704!11762-123H7;0.0463249!11838-124H2;0.0982695!11757-123H2;0.0724513!11759-123H4;0.300174!11761-123H6;0.563177!11842-124H6;0.133724!11837-124H1;0.202348!10568-108B1;0.153852!13230-141I8;0.790601!13231-141I9;0.232283!10696-109G3;0.164721!10493-107B7;0.36943!10494-107B8;0.460189!10850-111F4;0.535269!10851-111F5;0.381449!10852-111F6;0.525635!10853-111F7;0.79279!10854-111F8;0.413862!10855-111F9;0.765043!10856-111G1;0.441438!10847-111F1;0.0713635!10846-111E9;0.962222!10848-111F2;0.0623942!10845-111E8;0.390206!10857-111G2;0.101547!10858-111G3;0.434069!10156-103A3;0.234214!11901-125F2;0.000280886!11902-125F3;0.196189!11903-125F4;0.256695!10689-109F5;0.16275!10648-109A9;0.91408!10784-110H1;0.753357!10744-110C6;0.000131826!10772-110F7;0.927298!10474-106I6;0.0401982!10600-108E6;0.680583!10684-109E9;0.0900364!12226-129F3;0.471727!12227-129F4;0.0121429!10508-107D4;0.626339!10539-107G8;0.304643!10607-108F4;0.112884!10555-107I6;0.310268!10774-110F9;0.0589927!10637-108I7;0.178206!10663-109C6;0.48324!10728-110A8;0.850747!10729-110A9;0.712391!10430-106D7;0.479976!10730-110B1;0.0248324!10813-111B3;0.668355!10812-111B2;0.0572842!10037-101F1;0.43639!10172-103C1;0.000184763!10163-103B1;1.38856e-05!10076-102A4;0.000618522!10073-102A1;7.32921e-05!10036-101E9;0.0493115!10195-103E6;0.000141897!10277-104E7;0.000270592!10434-106E2;0.0590335!10550-107I1;0.00342133!10545-107H5;0.0365194!10544-107H4;0.240447!10704-109H2;0.0552352!10510-107D6;0.479118!10558-107I9;0.0642924!10020-101D2;0.840279!10732-110B3;0.163368!10049-101G4;0.735559!10698-109G5;0.233052!10437-106E5;0.0532383!10417-106C3;0.141899!10035-101E8;0.001407!10171-103B9;0.000103956!10157-103A4;0.000169928!10034-101E7;0.000201493!10072-101I9;0.00013711!10199-103F1;0.0425745!10200-103F2;0.575755!10697-109G4;0.576032!10723-110A3;0.160444!10179-103C8;0.0631288!10160-103A7;0.000716201!10180-103C9;0.0019526!10162-103A9;0.0112889!10021-101D3;0.00332639!10840-111E3;0.938942!10706-109H4;0.510154!10033-101E6;0.658814!10032-101E5;0.000148065!10490-107B4;8.00804e-05!10439-106E7;0.0902315!10022-101D4;0.0341548!10176-103C5;0.0828795!10469-106I1;0.000628217!10067-101I4;0.0299521!10411-106B6;0.163614!10471-106I3;0.256463!10030-101E3;0.504168!10475-106I7;0.00466314!10787-110H4;0.547525!10477-106I9;0.565931!10695-109G2;0.967464!11771-123I7;0.194401!11772-123I8;0.418435!11773-123I9;0.618143!10093-102C3;0.839577!10442-106F1;0.660504!10442-106F1;0.455855!10201-103F3;0.452958!10639-108I9;0.138581!11843-124H7;0.255458!11841-124H5;0.108749!10693-109F9;0.044174!10436-106E4;0.00682069!10483-107A6;0.00675298!10282-104F3;0.00301401!10023-101D5;0.825852!10066-101I3;0.811039!10065-101I2;0.79704!10800-110I8;0.4052!10610-108F7;0.516715!10841-111E4;0.899537!10541-107H1;0.73524!10842-111E5;0.269002!10562-108A4;0.965509!10024-101D6;0.249609!10064-101I1;0.787338!10609-108F6;0.780931!10048-101G3;0.552358!10781-110G7;0.143104!10181-103D1;0.762276!10159-103A6;0.00141841!10056-101H2;0.00137827!10737-110B8;0.00113702!10025-101D7;0.327462!10044-101F8;0.931656!10424-106D1;0.795115!10463-106H4;0.508073!10616-108G4;0.0677223!10486-107A9;0.426225!10062-101H8;0.00286014!10202-103F4;0.793309!10158-103A5;0.333476!10441-106E9;0.011582!10031-101E4;0.628091!10063-101H9;0.000130794!10063-101H9;0.0508569!11763-123H8;0.489348!11765-123I1;0.107301!11768-123I4;0.165278!10807-111A6;0.247977!10790-110H7;0.350619!10798-110I6;0.72594!10786-110H3;0.819116!10591-108D6;0.224745!10593-108D8;0.0186445!10590-108D5;0.349469!10026-101D8;0.25354!10096-102C6;0.174101!10168-103B6;0.877888!10154-103A1;0.00245131!10209-103G2;0.00292386!10061-101H7;0.904527!10027-101D9;0.66358!10043-101F7;0.246421!10783-110G9;0.303696!10028-101E1;0.0191464!10060-101H6;0.893561!10203-103F5;0.719009!10059-101H5;0.927487!10047-101G2;0.947967!10029-101E2;0.556014!10058-101H4;0.989164!10418-106C4;0.448701!10492-107B6;0.216918!10694-109G1;0.389186!10797-110I5;0.481319!10057-101H3;0.00887606!10100-102D1;0.107935!10055-101H1;0.2571!10204-103F6;0.251241!10191-103E2;0.366675!10563-108A5;0.6052
|name=12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27
|name=12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27
|tomtom_result=run::Bgb#MA0242.1;1;0.0141923;6.75555;1;8;TGCAGTTTTT;TTGCGGTTA;-!AFT1#MA0269.1;9;0.0194733;9.2693;1;10;TGCAGTTTTT;CCAATCGGGTGCAATATGTAA;-
}}
}}

Latest revision as of 12:11, 7 September 2012

Full Name: 12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27

Motif matrix
POACGT
1160.51299.968181.632965.888
250.68870.41039.104247.808
31.4081403.7761.4081.408
4877.1841.408223.872305.536
581.6641.4081310.84814.08
65.632199.9361.4081201.024
7373.12268.928346.368420.992
8205.5681.408104.1921096.832
91.408309.761.4081095.424
10294.272298.4961.408813.824

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
run::Bgb#MA0242.110.01419236.7555518TGCAGTTTTTTTGCGGTTA-
AFT1#MA0269.190.01947339.2693110TGCAGTTTTTCCAATCGGGTGCAATATGTAA-
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