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MacroAPE 1083:Motif TNAGCC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;23648!02;5912;5912;5912;5912!03;23648;0;0;0!04;0;0;23648;0!05;0;23648;0;0!06;0;23648;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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110H5;0.295308!10792-110H9;0.53912!10765-110E9;0.888379!10829-111D1;0.659956!10830-111D2;0.8498!10831-111D3;0.784868!10832-111D4;0.416715!10833-111D5;0.847824!10764-110E8;0.656774!10770-110F5;0.805001!10399-106A3;0.990642!10400-106A4;0.711451!10405-106A9;0.846436!10834-111D6;0.791236!10835-111D7;0.740055!10836-111D8;0.721377!10837-111D9;0.224193!10699-109G6;0.303745!10802-111A1;0.58943!10796-110I4;0.969639!10010-101C1;0.554432!10810-111A9;0.587818!10421-106C7;0.838327!10708-109H6;0.907936!12235-129G3;0.904319!12236-129G4;0.717479!12237-129G5;0.761!10167-103B5;0.577895!10151-102I7;0.776931!10428-106D5;0.721912!10795-110I3;0.76369!10805-111A4;0.592156!10052-101G7;0.794931!10189-103D9;0.881533!10589-108D4;0.725165!10425-106D2;0.96935!10427-106D4;0.903937!10702-109G9;0.873668!10432-106D9;0.199337!10496-107C1;0.941429!10718-109I7;0.62436!10011-101C2;0.569868!10053-101G8;0.972085!10686-109F2;0.869805!10084-102B3;0.156646!10012-101C3;0.771327!10085-102B4;0.806272!10482-107A5;0.495447!10419-106C5;0.959038!10080-102A8;0.723794!10760-110E4;0.963076!10709-109H7;0.724784!10710-109H8;0.756376!10703-109H1;0.688791!10719-109I8;0.918851!10642-109A3;0.938187!10177-103C6;0.729605!10164-103B2;0.683292!10173-103C2;0.711517!10166-103B4;0.911002!10083-102B2;0.921909!10188-103D8;0.999776!10552-107I3;0.838674!10553-107I4;0.265096!10013-101C4;0.849367!10536-107G5;0.909644!10618-108G6;0.681555!10423-106C9;0.811169!10785-110H2;0.951844!12238-129G6;0.97176!12239-129G7;0.700675!12240-129G8;0.180481!10416-106C2;0.945086!10801-110I9;0.876165!10766-110F1;0.757088!10824-111C5;0.826417!10825-111C6;0.558846!10826-111C7;0.61081!10454-106G4;0.58424!10409-106B4;0.952078!10638-108I8;0.613453!10636-108I6;0.78631!10513-107D9;0.637391!10420-106C6;0.844569!10082-102B1;0.567722!10014-101C5;0.967176!10070-101I7;0.974728!10452-106G2;0.999828!10453-106G3;0.793339!10449-106F8;0.703967!10042-101F6;0.731156!10069-101I6;0.610211!10193-103E4;0.538701!10631-108I1;0.760623!10438-106E6;0.788955!10488-107B2;0.978308!10196-103E7;0.711138!10071-101I8;0.919238!10071-101I8;0.832093!10041-101F5;0.605149!10451-106G1;0.445957!10450-106F9;0.591127!10604-108F1;0.22962!10605-108F2;0.899766!10606-108F3;0.694062!10603-108E9;0.982386!10497-107C2;0.915772!10448-106F7;0.932272!10643-109A4;0.957809!10426-106D3;0.874026!10431-106D8;0.618914!10197-103E8;0.955477!10443-106F2;0.71413!10815-111B5;0.887115!10816-111B6;0.5555!10817-111B7;0.485626!10015-101C6;0.501821!10410-106B5;0.738307!10054-101G9;0.737743!10758-110E2;0.610376!10711-109H9;0.511271!10040-101F4;0.996914!10470-106I2;0.788239!10415-106C1;0.76894!10198-103E9;0.804479!10614-108G2;0.955096!10612-108F9;0.116656!10549-107H9;0.676795!10615-108G3;0.969659!10487-107B1;0.89821!10433-106E1;0.618619!10688-109F4;0.747412!10444-106F3;0.689082!10444-106F3;0.561128!10485-107A8;0.623022!10413-106B8;0.951911!10175-103C4;0.919321!10161-103A8;0.729527!12131-128D7;0.587747!10624-108H3;0.536329!10712-109I1;0.517883!10205-103F7;0.998466!10206-103F8;0.628039!10207-103F9;0.788171!10050-101G5;0.522642!10051-101G6;0.697026!10016-101C7;0.924335!10046-101G1;0.556744!10778-110G4;0.597158!10633-108I3;0.427918!10818-111B8;0.585364!10819-111B9;0.741922!10820-111C1;0.801238!10484-107A7;0.784813!10808-111A7;0.231149!10169-103B7;0.856549!10153-102I9;0.81102!13425-144D5;0.707431!13433-144E4;0.776252!13437-144E8;0.607863!11904-125F5;0.474118!11905-125F6;0.371524!10039-101F3;0.735684!10791-110H8;0.780043!10017-101C8;0.422592!10045-101F9;0.934366!10509-107D5;0.838069!10839-111E2;0.958926!10692-109F8;0.158131!10079-102A7;0.738845!10078-102A6;0.851194!10721-110A1;0.899762!10569-108B2;0.687372!10570-108B3;0.259314!10571-108B4;0.28523!10647-109A8;0.182948!10752-110D5;0.739521!10782-110G8;0.612542!10726-110A6;0.285815!10018-101C9;0.849111!10086-102B5;0.831896!10182-103D2;0.613703!10165-103B3;0.764969!10499-107C4;0.673309!10408-106B3;0.700237!10019-101D1;0.956155!10068-101I5;0.780834!10075-102A3;0.644327!10077-102A5;0.76585!10727-110A7;0.460902!10775-110G1;0.756021!10412-106B7;0.485664!12231-129F8;0.644789!12232-129F9;0.727352!12233-129G1;0.961777!12234-129G2;0.931327!10414-106B9;0.906682!10170-103B8;0.922945!10183-103D3;0.873597!10150-102I6;0.859658!10174-103C3;0.80342!10155-103A2;0.644114!10038-101F2;0.636382!10838-111E1;0.666624!10759-110E3;0.513027!10514-107E1;0.979639!10465-106H6;0.652216!10691-109F7;0.199415!10843-111E6;0.438302!10844-111E7;0.669786!11747-123G1;0.511848!11748-123G2;0.280375!11749-123G3;0.302406!11750-123G4;0.326176!11751-123G5;0.0931153!11840-124H4;0.114896!11752-123G6;0.172347!11753-123G7;0.166588!11754-123G8;0.22761!11755-123G9;0.346474!11756-123H1;0.356396!11833-124G6;0.778764!11760-123H5;0.480892!11836-124G9;0.697067!11758-123H3;0.428641!11835-124G8;0.179717!11762-123H7;0.385888!11838-124H2;0.439914!11757-123H2;0.539227!11759-123H4;0.845373!11761-123H6;0.255819!11842-124H6;0.897114!11837-124H1;0.218048!10568-108B1;0.379648!13230-141I8;0.831167!13231-141I9;0.14337!10696-109G3;0.125961!10493-107B7;0.900269!10494-107B8;0.707281!10850-111F4;0.230701!10851-111F5;0.89703!10852-111F6;0.972361!10853-111F7;0.910812!10854-111F8;0.928581!10855-111F9;0.612019!10856-111G1;0.593282!10847-111F1;0.724224!10846-111E9;0.620535!10848-111F2;0.631441!10845-111E8;0.911562!10857-111G2;0.97093!10858-111G3;0.667343!10156-103A3;0.473819!11901-125F2;0.774723!11902-125F3;0.28825!11903-125F4;0.298658!10689-109F5;0.83157!10648-109A9;0.449469!10784-110H1;0.810256!10744-110C6;0.973917!10772-110F7;0.918265!10474-106I6;0.855164!10600-108E6;0.316931!10684-109E9;0.591203!12226-129F3;0.394715!12227-129F4;0.949277!10508-107D4;0.467674!10539-107G8;0.611909!10607-108F4;0.649395!10555-107I6;0.905948!10774-110F9;0.936253!10637-108I7;0.673003!10663-109C6;0.779906!10728-110A8;0.685799!10729-110A9;0.986138!10430-106D7;0.459286!10730-110B1;0.880184!10813-111B3;0.871074!10812-111B2;0.343992!10037-101F1;0.142239!10172-103C1;0.763669!10163-103B1;0.943972!10076-102A4;0.715706!10073-102A1;0.811792!10036-101E9;0.655197!10195-103E6;0.802511!10277-104E7;0.801684!10434-106E2;0.811865!10550-107I1;0.80321!10545-107H5;0.890332!10544-107H4;0.851831!10704-109H2;0.823229!10510-107D6;0.668458!10558-107I9;0.759336!10020-101D2;0.460552!10732-110B3;0.795867!10049-101G4;0.704362!10698-109G5;0.395064!10437-106E5;0.6864!10417-106C3;0.979003!10035-101E8;0.791741!10171-103B9;0.808627!10157-103A4;0.926427!10034-101E7;0.801522!10072-101I9;0.805921!10199-103F1;0.609305!10200-103F2;0.895202!10697-109G4;0.682091!10723-110A3;0.396619!10179-103C8;0.911194!10160-103A7;0.812368!10180-103C9;0.590364!10162-103A9;0.855562!10021-101D3;0.739273!10840-111E3;0.744037!10706-109H4;0.884546!10033-101E6;0.535741!10032-101E5;0.867104!10490-107B4;0.804059!10439-106E7;0.941397!10022-101D4;0.934111!10176-103C5;0.857849!10469-106I1;0.773875!10067-101I4;0.919784!10411-106B6;0.522438!10471-106I3;0.827478!10030-101E3;0.503096!10475-106I7;0.70771!10787-110H4;0.770253!10477-106I9;0.83471!10695-109G2;0.606645!11771-123I7;0.555261!11772-123I8;0.360795!11773-123I9;0.199843!10093-102C3;0.95835!10442-106F1;0.819933!10442-106F1;0.415501!10201-103F3;0.387804!10639-108I9;0.985041!11843-124H7;0.978112!11841-124H5;0.513029!10693-109F9;0.901073!10436-106E4;0.53392!10483-107A6;0.771886!10282-104F3;0.880149!10023-101D5;0.471032!10066-101I3;0.431251!10065-101I2;0.526535!10800-110I8;0.740334!10610-108F7;0.718249!10841-111E4;0.657041!10541-107H1;0.600369!10842-111E5;0.531163!10562-108A4;0.747941!10024-101D6;0.587945!10064-101I1;0.986211!10609-108F6;0.87306!10048-101G3;0.909399!10781-110G7;0.79787!10181-103D1;0.945081!10159-103A6;0.680396!10056-101H2;0.579697!10737-110B8;0.666283!10025-101D7;0.415657!10044-101F8;0.741696!10424-106D1;0.266274!10463-106H4;0.641372!10616-108G4;0.968157!10486-107A9;0.827627!10062-101H8;0.558039!10202-103F4;0.919494!10158-103A5;0.858903!10441-106E9;0.601655!10031-101E4;0.530383!10063-101H9;0.796924!10063-101H9;0.56587!11763-123H8;0.856039!11765-123I1;0.226418!11768-123I4;0.156725!10807-111A6;0.100274!10790-110H7;0.909122!10798-110I6;0.723126!10786-110H3;0.270215!10591-108D6;0.824616!10593-108D8;0.389465!10590-108D5;0.70788!10026-101D8;0.995627!10096-102C6;0.971858!10168-103B6;0.637652!10154-103A1;0.752554!10209-103G2;0.667409!10061-101H7;0.646067!10027-101D9;0.598496!10043-101F7;0.400998!10783-110G9;0.343618!10028-101E1;0.486077!10060-101H6;0.94162!10203-103F5;0.642199!10059-101H5;0.721153!10047-101G2;0.598808!10029-101E2;0.526125!10058-101H4;0.559518!10418-106C4;0.664768!10492-107B6;0.492413!10694-109G1;0.521815!10797-110I5;0.469676!10057-101H3;0.351824!10100-102D1;0.753289!10055-101H1;0.957535!10204-103F6;0.776613!10191-103E2;0.916731!10563-108A5;0.592085
|name=motif_TNAGCC
|name=motif_TNAGCC
|tomtom_result=CRZ1#MA0285.1;1;0.00191232;0.910266;1;6;TAAGCC;CTAAGCCAC;+!UME6#MA0412.1;2;0.00651665;3.10193;1;6;TAAGCC;AATTAGCCGCCGA;-!oc#MA0234.1;0;0.0158401;7.53989;1;6;TAAGCC;TAATCC;+!bcd#MA0212.1;0;0.016502;7.85497;1;6;TAAGCC;TAATCC;+!HAP3#MA0314.1;2;0.0184558;8.78494;1;6;TAAGCC;TCTGAACCAATCAGA;-
}}
}}

Latest revision as of 12:28, 7 September 2012

Full Name: motif_TNAGCC

Motif matrix
POACGT
0100023648
025912591259125912
0323648000
0400236480
0502364800
0602364800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.110.001912320.91026616TAAGCCCTAAGCCAC+
UME6#MA0412.120.006516653.1019316TAAGCCAATTAGCCGCCGA-
oc#MA0234.100.01584017.5398916TAAGCCTAATCC+
bcd#MA0212.100.0165027.8549716TAAGCCTAATCC+
HAP3#MA0314.120.01845588.7849416TAAGCCTCTGAACCAATCAGA-
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