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MacroAPE 1083:Motif TNCGCA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;1568!02;392;392;392;392!03;0;1568;0;0!04;0;0;1568;0!05;0;1568;0;0!06;1568;0;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.145067!1...")
 
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D6;0.008406!10464-106H5;0.00611759!10827-111C8;0.00930045!10789-110H6;0.0262597!10828-111C9;0.088831!10788-110H5;0.0824266!10792-110H9;0.00605227!10765-110E9;0.0591662!10829-111D1;0.00394813!10830-111D2;0.0163931!10831-111D3;0.0211758!10832-111D4;0.00106423!10833-111D5;0.00537852!10764-110E8;0.00341869!10770-110F5;0.0781594!10399-106A3;0.0317264!10400-106A4;0.0112431!10405-106A9;0.00621413!10834-111D6;0.00742646!10835-111D7;0.00474524!10836-111D8;0.0312861!10837-111D9;0.0192671!10699-109G6;0.15855!10802-111A1;0.019229!10796-110I4;0.126551!10010-101C1;0.475408!10810-111A9;0.0523828!10421-106C7;0.00179386!10708-109H6;0.0337349!12235-129G3;0.0455616!12236-129G4;0.55381!12237-129G5;0.775114!10167-103B5;0.961665!10151-102I7;0.731314!10428-106D5;0.910836!10795-110I3;0.448266!10805-111A4;0.0783756!10052-101G7;0.0190169!10189-103D9;0.0909939!10589-108D4;0.245522!10425-106D2;0.164531!10427-106D4;0.471129!10702-109G9;0.0884908!10432-106D9;0.0292694!10496-107C1;0.648214!10718-109I7;0.899463!10011-101C2;0.00785516!10053-101G8;0.0748923!10686-109F2;0.71031!10084-102B3;0.318418!10012-101C3;0.98357!10085-102B4;0.96419!10482-107A5;0.976904!10419-106C5;0.30481!10080-102A8;0.484719!10760-110E4;0.0291336!10709-109H7;0.667179!10710-109H8;0.98119!10703-109H1;0.58077!10719-109I8;0.0496928!10642-109A3;0.162833!10177-103C6;0.216073!10164-103B2;0.902558!10173-103C2;0.829389!10166-103B4;0.411582!10083-102B2;0.616546!10188-103D8;0.740529!10552-107I3;0.951901!10553-107I4;0.150999!10013-101C4;0.832952!10536-107G5;0.0784882!10618-108G6;0.781158!10423-106C9;0.210126!10785-110H2;0.247658!12238-129G6;0.495443!12239-129G7;0.0177433!12240-129G8;0.0332882!10416-106C2;0.0129123!10801-110I9;0.0827035!10766-110F1;0.0882805!10824-111C5;0.46225!10825-111C6;0.117514!10826-111C7;0.13922!10454-106G4;0.123095!10409-106B4;0.0985233!10638-108I8;0.108869!10636-108I6;0.464511!10513-107D9;0.635672!10420-106C6;0.571601!10082-102B1;0.0853653!10014-101C5;0.245952!10070-101I7;0.0800845!10452-106G2;0.0686491!10453-106G3;0.0457024!10449-106F8;0.0599797!10042-101F6;0.0147401!10069-101I6;0.69736!10193-103E4;0.0842602!10631-108I1;0.924225!10438-106E6;0.0151187!10488-107B2;0.966695!10196-103E7;0.081561!10071-101I8;0.117188!10071-101I8;0.0623587!10041-101F5;0.929008!10451-106G1;0.132413!10450-106F9;0.167069!10604-108F1;0.101613!10605-108F2;0.186573!10606-108F3;0.139133!10603-108E9;0.148992!10497-107C2;0.151384!10448-106F7;0.664362!10643-109A4;0.122558!10426-106D3;0.290827!10431-106D8;0.77596!10197-103E8;0.374797!10443-106F2;0.035103!10815-111B5;0.541786!10816-111B6;0.210126!10817-111B7;0.189265!10015-101C6;0.177214!10410-106B5;0.0415787!10054-101G9;0.0118139!10758-110E2;0.233489!10711-109H9;0.60696!10040-101F4;0.355122!10470-106I2;0.853955!10415-106C1;0.508898!10198-103E9;0.69358!10614-108G2;0.0594055!10612-108F9;0.904972!10549-107H9;0.772066!10615-108G3;0.0232323!10487-107B1;0.0290904!10433-106E1;0.0594603!10688-109F4;0.449472!10444-106F3;0.945736!10444-106F3;0.316271!10485-107A8;0.238479!10413-106B8;0.331657!10175-103C4;0.242778!10161-103A8;0.941413!12131-128D7;0.945227!10624-108H3;0.0390922!10712-109I1;0.655241!10205-103F7;0.0972031!10206-103F8;0.170269!10207-103F9;0.282277!10050-101G5;0.162373!10051-101G6;0.184469!10016-101C7;0.16051!10046-101G1;0.193573!10778-110G4;0.111276!10633-108I3;0.21827!10818-111B8;0.477469!10819-111B9;0.292899!10820-111C1;0.282559!10484-107A7;0.32665!10808-111A7;0.417025!10169-103B7;0.0426077!10153-102I9;0.757872!13425-144D5;0.977571!13433-144E4;0.255542!13437-144E8;0.258623!11904-125F5;0.148553!11905-125F6;0.607689!10039-101F3;0.361897!10791-110H8;0.892773!10017-101C8;0.771476!10045-101F9;0.267408!10509-107D5;0.119461!10839-111E2;0.474074!10692-109F8;0.697665!10079-102A7;0.646464!10078-102A6;0.118636!10721-110A1;0.079286!10569-108B2;0.0843918!10570-108B3;0.105746!10571-108B4;0.0510203!10647-109A8;0.139681!10752-110D5;0.0333397!10782-110G8;0.11878!10726-110A6;0.776489!10018-101C9;0.328728!10086-102B5;0.0314207!10182-103D2;0.0376252!10165-103B3;0.825472!10499-107C4;0.878652!10408-106B3;0.448566!10019-101D1;0.647582!10068-101I5;0.031119!10075-102A3;0.103222!10077-102A5;0.0247496!10727-110A7;0.0689222!10775-110G1;0.270709!10412-106B7;0.0183592!12231-129F8;0.990325!12232-129F9;0.430207!12233-129G1;0.340094!12234-129G2;0.376537!10414-106B9;0.892769!10170-103B8;0.36165!10183-103D3;0.654595!10150-102I6;0.821747!10174-103C3;0.938932!10155-103A2;0.638027!10038-101F2;0.733668!10838-111E1;0.619575!10759-110E3;0.43076!10514-107E1;0.170724!10465-106H6;0.165134!10691-109F7;0.532352!10843-111E6;0.795553!10844-111E7;0.0282894!11747-123G1;0.352382!11748-123G2;0.513647!11749-123G3;0.623437!11750-123G4;0.517857!11751-123G5;0.24288!11840-124H4;0.218196!11752-123G6;0.124665!11753-123G7;0.347144!11754-123G8;0.36066!11755-123G9;0.294193!11756-123H1;0.497652!11833-124G6;0.673032!11760-123H5;0.434696!11836-124G9;0.225361!11758-123H3;0.0749194!11835-124G8;0.290785!11762-123H7;0.0643526!11838-124H2;0.0604109!11757-123H2;0.128065!11759-123H4;0.657018!11761-123H6;0.261679!11842-124H6;0.0694582!11837-124H1;0.207346!10568-108B1;0.110327!13230-141I8;0.75209!13231-141I9;0.260449!10696-109G3;0.198697!10493-107B7;0.828007!10494-107B8;0.256913!10850-111F4;0.86171!10851-111F5;0.414612!10852-111F6;0.914862!10853-111F7;0.59939!10854-111F8;0.492772!10855-111F9;0.0759943!10856-111G1;0.357477!10847-111F1;0.689408!10846-111E9;0.645942!10848-111F2;0.343148!10845-111E8;0.33771!10857-111G2;0.1698!10858-111G3;0.0908113!10156-103A3;0.845318!11901-125F2;0.8921!11902-125F3;0.0836923!11903-125F4;0.139673!10689-109F5;0.076907!10648-109A9;0.31859!10784-110H1;0.939065!10744-110C6;0.939959!10772-110F7;0.36505!10474-106I6;0.0541522!10600-108E6;0.293023!10684-109E9;0.46242!12226-129F3;0.972692!12227-129F4;0.627218!10508-107D4;0.143133!10539-107G8;0.0962816!10607-108F4;0.15806!10555-107I6;0.0850655!10774-110F9;0.351343!10637-108I7;0.0749941!10663-109C6;0.177842!10728-110A8;0.281826!10729-110A9;0.22876!10430-106D7;0.0924353!10730-110B1;0.0132237!10813-111B3;0.0468274!10812-111B2;0.221689!10037-101F1;0.22905!10172-103C1;0.944422!10163-103B1;0.563325!10076-102A4;0.950467!10073-102A1;0.846761!10036-101E9;0.923666!10195-103E6;0.951169!10277-104E7;0.899803!10434-106E2;0.999243!10550-107I1;0.445019!10545-107H5;0.377303!10544-107H4;0.66336!10704-109H2;0.830709!10510-107D6;0.903775!10558-107I9;0.607691!10020-101D2;0.416459!10732-110B3;0.0659635!10049-101G4;0.57751!10698-109G5;0.511176!10437-106E5;0.262915!10417-106C3;0.619536!10035-101E8;0.889189!10171-103B9;0.87183!10157-103A4;0.656272!10034-101E7;0.850511!10072-101I9;0.904579!10199-103F1;0.956527!10200-103F2;0.112708!10697-109G4;0.0834526!10723-110A3;0.125592!10179-103C8;0.876759!10160-103A7;0.861333!10180-103C9;0.99547!10162-103A9;0.664217!10021-101D3;0.748609!10840-111E3;0.0183004!10706-109H4;0.0695429!10033-101E6;0.565512!10032-101E5;0.992307!10490-107B4;0.902729!10439-106E7;0.242201!10022-101D4;0.492681!10176-103C5;0.102313!10469-106I1;0.748482!10067-101I4;0.723229!10411-106B6;0.174884!10471-106I3;0.533621!10030-101E3;0.923168!10475-106I7;0.271151!10787-110H4;0.0152566!10477-106I9;0.00589076!10695-109G2;0.418531!11771-123I7;0.321072!11772-123I8;0.847256!11773-123I9;0.919652!10093-102C3;0.495401!10442-106F1;0.236803!10442-106F1;0.456768!10201-103F3;0.511997!10639-108I9;0.0979101!11843-124H7;0.358705!11841-124H5;0.985267!10693-109F9;0.579535!10436-106E4;0.63994!10483-107A6;0.978493!10282-104F3;0.496318!10023-101D5;0.405771!10066-101I3;0.145524!10065-101I2;0.0552218!10800-110I8;0.0527661!10610-108F7;0.0752974!10841-111E4;0.030837!10541-107H1;0.000132272!10842-111E5;0.327669!10562-108A4;0.052829!10024-101D6;0.748333!10064-101I1;0.0796161!10609-108F6;0.0349665!10048-101G3;0.212002!10781-110G7;0.161306!10181-103D1;0.61639!10159-103A6;0.700452!10056-101H2;0.847353!10737-110B8;0.437797!10025-101D7;0.142979!10044-101F8;0.177421!10424-106D1;0.0813361!10463-106H4;0.113661!10616-108G4;0.614136!10486-107A9;0.7244!10062-101H8;0.216795!10202-103F4;0.0571569!10158-103A5;0.142978!10441-106E9;0.802801!10031-101E4;0.0675187!10063-101H9;0.995696!10063-101H9;0.961365!11763-123H8;0.13818!11765-123I1;0.159204!11768-123I4;0.165856!10807-111A6;0.210112!10790-110H7;0.0467335!10798-110I6;0.12435!10786-110H3;0.76703!10591-108D6;0.362939!10593-108D8;0.0258919!10590-108D5;0.241082!10026-101D8;0.161095!10096-102C6;0.157452!10168-103B6;0.0434607!10154-103A1;0.994996!10209-103G2;0.954051!10061-101H7;0.0706791!10027-101D9;0.0606248!10043-101F7;0.791549!10783-110G9;0.479464!10028-101E1;0.881811!10060-101H6;0.150799!10203-103F5;0.0360489!10059-101H5;0.0761733!10047-101G2;0.068976!10029-101E2;0.110234!10058-101H4;0.0536331!10418-106C4;0.0549839!10492-107B6;0.349263!10694-109G1;0.463066!10797-110I5;0.378263!10057-101H3;0.95562!10100-102D1;0.0698223!10055-101H1;0.140468!10204-103F6;0.0565368!10191-103E2;0.375852!10563-108A5;0.131728
|name=motif_TNCGCA
|name=motif_TNCGCA
|tomtom_result=CEBPA#MA0102.2;1;0.000841059;0.400344;0.617406;6;TACGCA;TTTCGCAAT;+!Cebpa#MA0102.1;1;0.00147139;0.700381;0.617406;6;TACGCA;TTTCGCAATCTT;+!RDR1#MA0360.1;2;0.00194561;0.926108;0.617406;6;TACGCA;GTTCCGCA;-!mab-3#MA0262.1;2;0.0040301;1.91833;0.959165;6;TACGCA;AATTCGCAACATT;-!HLF#MA0043.1;3;0.00907944;4.32182;1;6;TACGCA;GGTTACGCAATT;+!NHLH1#MA0048.1;-1;0.0146336;6.96561;1;5;TACGCA;GCGCAGCTGCGT;+!slbo#MA0244.1;0;0.0154979;7.37701;1;6;TACGCA;TTTGCAAT;-
}}
}}

Latest revision as of 12:29, 7 September 2012

Full Name: motif_TNCGCA

Motif matrix
POACGT
010001568
02392392392392
030156800
040015680
050156800
061568000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CEBPA#MA0102.210.0008410590.4003440.6174066TACGCATTTCGCAAT+
Cebpa#MA0102.110.001471390.7003810.6174066TACGCATTTCGCAATCTT+
RDR1#MA0360.120.001945610.9261080.6174066TACGCAGTTCCGCA-
mab-3#MA0262.120.00403011.918330.9591656TACGCAAATTCGCAACATT-
HLF#MA0043.130.009079444.3218216TACGCAGGTTACGCAATT+
NHLH1#MA0048.1-10.01463366.9656115TACGCAGCGCAGCTGCGT+
slbo#MA0244.100.01549797.3770116TACGCATTTGCAAT-
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