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MacroAPE 1083:Motif588: Difference between revisions

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43!11369-118A1;0.770569!11441-118I1;0.931467!10007-101B4;0.863218!11520-119H8;0.414017!11600-120H7;0.269326!11681-122H7;0.205936!11216-116B1;0.144556!12179-129A1;0.537495!12180-129A2;2.19005e-06!12181-129A3;1.78192e-06!12176-128I7;8.2531e-07!12177-128I8;3.20669e-07!12182-129A4;3.0515e-07!12183-129A5;1.68657e-06!12184-129A6;1.53809e-06!10809-111A8;3.44865e-07!10597-108E3;0.135273!10717-109I6;0.0446883!10455-106G5;0.110159!10534-107G3;0.00825201!10429-106D6;0.125268!10464-106H5;0.123084!10827-111C8;0.199462!10789-110H6;0.0318454!10828-111C9;0.005763!10788-110H5;0.002632!10792-110H9;0.0734191!10765-110E9;0.00765776!10829-111D1;0.00436266!10830-111D2;0.00989305!10831-111D3;0.0140903!10832-111D4;0.0260928!10833-111D5;0.00512028!10764-110E8;0.00782155!10770-110F5;8.47708e-05!10399-106A3;0.00307426!10400-106A4;0.00271305!10405-106A9;0.00238927!10834-111D6;0.00110987!10835-111D7;0.00145596!10836-111D8;0.16749!10837-111D9;0.503577!10699-109G6;0.0776603!10802-111A1;0.0883443!10796-110I4;0.119912!10010-101C1;0.341752!10810-111A9;0.648782!10421-106C7;0.572542!10708-109H6;0.00369619!12235-129G3;0.0881642!12236-129G4;0.279066!12237-129G5;0.0388133!10167-103B5;0.288137!10151-102I7;0.000762065!10428-106D5;0.00523651!10795-110I3;0.717217!10805-111A4;0.041472!10052-101G7;0.083208!10189-103D9;0.291258!10589-108D4;0.878242!10425-106D2;0.0662639!10427-106D4;0.000643518!10702-109G9;0.00304864!10432-106D9;0.303608!10496-107C1;0.865712!10718-109I7;0.384484!10011-101C2;0.00341371!10053-101G8;0.231452!10686-109F2;2.36595e-05!10084-102B3;0.842743!10012-101C3;0.00145894!10085-102B4;0.00348152!10482-107A5;0.000103731!10419-106C5;0.196253!10080-102A8;0.354242!10760-110E4;0.25911!10709-109H7;0.798839!10710-109H8;0.171226!10703-109H1;0.106392!10719-109I8;0.0354624!10642-109A3;0.0432843!10177-103C6;0.00794272!10164-103B2;0.00109375!10173-103C2;0.00286415!10166-103B4;0.000649684!10083-102B2;0.000796824!10188-103D8;0.000292949!10552-107I3;0.00435383!10553-107I4;0.651879!10013-101C4;0.266472!10536-107G5;0.103485!10618-108G6;0.305219!10423-106C9;0.295799!10785-110H2;0.148676!12238-129G6;0.0727947!12239-129G7;0.505317!12240-129G8;0.260438!10416-106C2;0.651938!10801-110I9;0.0442287!10766-110F1;0.0100238!10824-111C5;0.0437637!10825-111C6;0.582826!10826-111C7;0.711321!10454-106G4;0.497887!10409-106B4;0.770826!10638-108I8;0.0886302!10636-108I6;0.516571!10513-107D9;0.517607!10420-106C6;0.0149541!10082-102B1;0.207682!10014-101C5;0.151345!10070-101I7;0.217072!10452-106G2;0.133743!10453-106G3;0.33337!10449-106F8;0.199947!10042-101F6;0.155503!10069-101I6;0.00881631!10193-103E4;0.0595275!10631-108I1;0.00157766!10438-106E6;0.0756701!10488-107B2;0.28!10196-103E7;0.818817!10071-101I8;0.0306162!10071-101I8;0.224977!10041-101F5;0.000345795!10451-106G1;0.911663!10450-106F9;0.315323!10604-108F1;0.156941!10605-108F2;0.427737!10606-108F3;0.432546!10603-108E9;0.480924!10497-107C2;0.432899!10448-106F7;0.144306!10643-109A4;0.756956!10426-106D3;0.16939!10431-106D8;0.685783!10197-103E8;0.701708!10443-106F2;0.148544!10815-111B5;0.632976!10816-111B6;0.758546!10817-111B7;0.630687!10015-101C6;0.855692!10410-106B5;0.16867!10054-101G9;0.154231!10758-110E2;0.0277078!10711-109H9;0.0191088!10040-101F4;0.0462265!10470-106I2;0.00200253!10415-106C1;0.0271017!10198-103E9;0.676836!10614-108G2;0.268522!10612-108F9;0.135041!10549-107H9;0.190554!10615-108G3;0.454439!10487-107B1;0.0109085!10433-106E1;0.17109!10688-109F4;0.392851!10444-106F3;0.069698!10444-106F3;0.811616!10485-107A8;0.647123!10413-106B8;0.741212!10175-103C4;0.160892!10161-103A8;0.000921202!12131-128D7;0.0219749!10624-108H3;0.000220258!10712-109I1;0.0648646!10205-103F7;0.010398!10206-103F8;0.125544!10207-103F9;0.0823594!10050-101G5;0.43121!10051-101G6;0.0229927!10016-101C7;0.0512702!10046-101G1;0.178845!10778-110G4;0.0361631!10633-108I3;0.301988!10818-111B8;0.000173584!10819-111B9;0.203561!10820-111C1;0.193163!10484-107A7;0.186394!10808-111A7;0.0542849!10169-103B7;0.0352784!10153-102I9;0.00155246!13425-144D5;0.00752798!13433-144E4;2.93802e-05!13437-144E8;2.65164e-06!11904-125F5;8.22736e-05!11905-125F6;1.49434e-06!10039-101F3;0.0375197!10791-110H8;0.00238642!10017-101C8;0.91046!10045-101F9;0.270491!10509-107D5;0.0381413!10839-111E2;0.973967!10692-109F8;0.419995!10079-102A7;0.000863697!10078-102A6;0.163333!10721-110A1;0.208228!10569-108B2;0.384673!10570-108B3;0.327197!10571-108B4;0.784057!10647-109A8;0.277499!10752-110D5;0.0759878!10782-110G8;0.161191!10726-110A6;0.320205!10018-101C9;0.215378!10086-102B5;0.306745!10182-103D2;0.206687!10165-103B3;0.00266058!10499-107C4;0.00698872!10408-106B3;0.463743!10019-101D1;0.184738!10068-101I5;0.847496!10075-102A3;0.290433!10077-102A5;0.867773!10727-110A7;0.000751689!10775-110G1;0.0125093!10412-106B7;0.00758779!12231-129F8;0.994929!12232-129F9;0.109648!12233-129G1;0.232219!12234-129G2;0.138365!10414-106B9;0.0621461!10170-103B8;0.0990723!10183-103D3;0.000508554!10150-102I6;0.000353658!10174-103C3;0.00539855!10155-103A2;0.00580498!10038-101F2;0.0239115!10838-111E1;0.0164585!10759-110E3;0.00414568!10514-107E1;0.387443!10465-106H6;0.348708!10691-109F7;0.505755!10843-111E6;0.539676!10844-111E7;0.0435615!11747-123G1;0.00878377!11748-123G2;0.800142!11749-123G3;0.373796!11750-123G4;0.955023!11751-123G5;0.365954!11840-124H4;0.372791!11752-123G6;0.048138!11753-123G7;0.96526!11754-123G8;0.378857!11755-123G9;0.968553!11756-123H1;0.571191!11833-124G6;0.829517!11760-123H5;0.643901!11836-124G9;0.915997!11758-123H3;0.90024!11835-124G8;0.791365!11762-123H7;0.293538!11838-124H2;0.278611!11757-123H2;0.279901!11759-123H4;0.950253!11761-123H6;0.964496!11842-124H6;0.385163!11837-124H1;0.111174!10568-108B1;0.39987!13230-141I8;0.0274428!13231-141I9;0.332499!10696-109G3;0.208427!10493-107B7;0.331539!10494-107B8;0.460124!10850-111F4;0.260046!10851-111F5;0.767308!10852-111F6;0.591481!10853-111F7;0.666954!10854-111F8;0.438996!10855-111F9;0.205536!10856-111G1;0.449161!10847-111F1;0.101851!10846-111E9;0.0974481!10848-111F2;0.473717!10845-111E8;0.846499!10857-111G2;0.536779!10858-111G3;0.245675!10156-103A3;0.908662!11901-125F2;0.00572734!11902-125F3;0.00280879!11903-125F4;0.000451497!10689-109F5;0.00098186!10648-109A9;0.108269!10784-110H1;0.295564!10744-110C6;0.277364!10772-110F7;0.00174075!10474-106I6;0.00224623!10600-108E6;0.00255636!10684-109E9;0.119799!12226-129F3;0.73121!12227-129F4;0.775065!10508-107D4;0.75104!10539-107G8;0.0695194!10607-108F4;0.0768446!10555-107I6;0.103885!10774-110F9;0.0298298!10637-108I7;0.42697!10663-109C6;0.050924!10728-110A8;0.0345993!10729-110A9;0.202668!10430-106D7;0.377341!10730-110B1;0.504247!10813-111B3;0.036968!10812-111B2;0.0249418!10037-101F1;0.0835327!10172-103C1;0.00286761!10163-103B1;0.00014481!10076-102A4;0.00693231!10073-102A1;0.00126096!10036-101E9;0.000173139!10195-103E6;0.00132696!10277-104E7;0.00123506!10434-106E2;0.00280308!10550-107I1;0.997194!10545-107H5;0.261011!10544-107H4;0.966052!10704-109H2;0.598469!10510-107D6;0.761686!10558-107I9;0.290952!10020-101D2;0.103408!10732-110B3;0.0627368!10049-101G4;0.713541!10698-109G5;0.290228!10437-106E5;0.318995!10417-106C3;0.621428!10035-101E8;0.689044!10171-103B9;0.00198865!10157-103A4;0.00023929!10034-101E7;0.0043447!10072-101I9;0.00184304!10199-103F1;8.72315e-05!10200-103F2;0.99385!10697-109G4;0.0929701!10723-110A3;0.149638!10179-103C8;0.919545!10160-103A7;0.000567917!10180-103C9;0.00573979!10162-103A9;0.0101189!10021-101D3;0.0103236!10840-111E3;0.498054!10706-109H4;0.00316412!10033-101E6;0.543164!10032-101E5;0.0047019!10490-107B4;0.00126568!10439-106E7;0.312257!10022-101D4;0.0648199!10176-103C5;0.215341!10469-106I1;0.00103459!10067-101I4;0.0104142!10411-106B6;0.022308!10471-106I3;0.42418!10030-101E3;0.104969!10475-106I7;0.0533474!10787-110H4;0.0402893!10477-106I9;0.374808!10695-109G2;0.00518611!11771-123I7;0.048378!11772-123I8;0.0544715!11773-123I9;0.00470827!10093-102C3;0.00174776!10442-106F1;0.828097!10442-106F1;0.439322!10201-103F3;0.476106!10639-108I9;0.0668977!11843-124H7;0.0178679!11841-124H5;0.384914!10693-109F9;0.606492!10436-106E4;0.0563227!10483-107A6;0.838983!10282-104F3;0.847067!10023-101D5;0.0350761!10066-101I3;0.0506476!10065-101I2;0.0717692!10800-110I8;0.0815092!10610-108F7;0.0474253!10841-111E4;0.0076095!10541-107H1;0.242622!10842-111E5;0.274197!10562-108A4;0.0182393!10024-101D6;0.0365794!10064-101I1;0.637399!10609-108F6;0.191573!10048-101G3;0.742811!10781-110G7;0.0718492!10181-103D1;0.320902!10159-103A6;0.00889689!10056-101H2;0.0604697!10737-110B8;0.00606579!10025-101D7;0.656002!10044-101F8;0.00268868!10424-106D1;0.409509!10463-106H4;0.00567825!10616-108G4;0.675075!10486-107A9;0.116606!10062-101H8;0.321586!10202-103F4;0.0930124!10158-103A5;0.879989!10441-106E9;0.0446905!10031-101E4;0.0358152!10063-101H9;0.00154179!10063-101H9;0.000184925!11763-123H8;0.203742!11765-123I1;0.0638445!11768-123I4;0.0759195!10807-111A6;0.203663!10790-110H7;0.00175482!10798-110I6;0.0361905!10786-110H3;0.190114!10591-108D6;0.000680252!10593-108D8;0.00162625!10590-108D5;1.50923e-05!10026-101D8;0.0545375!10096-102C6;0.00571157!10168-103B6;0.000270555!10154-103A1;0.000489764!10209-103G2;0.0100721!10061-101H7;0.198807!10027-101D9;0.0627552!10043-101F7;0.000992909!10783-110G9;0.381688!10028-101E1;0.586838!10060-101H6;0.122943!10203-103F5;0.054096!10059-101H5;0.170795!10047-101G2;0.0532489!10029-101E2;0.578613!10058-101H4;0.665601!10418-106C4;0.187183!10492-107B6;0.318282!10694-109G1;0.0833739!10797-110I5;0.018295!10057-101H3;0.822676!10100-102D1;0.0628094!10055-101H1;0.143165!10204-103F6;0.0453494!10191-103E2;0.147711!10563-108A5;0.96431
|name=motif588
|name=motif588
|tomtom_result=SPI1#MA0080.2;0;0.000646795;0.307874;0.615749;7;GGGAGGTG;AGGAAGT;+!ELF5#MA0136.1;1;0.0018721;0.891118;0.777176;8;GGGAGGTG;AAGGAAGTA;-!GABPA#MA0062.2;1;0.00244953;1.16598;0.777176;8;GGGAGGTG;CCGGAAGTGGC;+!STAT1#MA0137.2;7;0.00326544;1.55435;0.777176;8;GGGAGGTG;GGTTTCCGGGAAATG;-!FEV#MA0156.1;1;0.00522883;2.48892;0.828745;7;GGGAGGTG;CAGGAAAT;+!SPI1#MA0080.2;0;0.00593872;2.82683;0.828745;6;GGGAGGTG;CGGAAG;+!znf143#MA0088.1;12;0.00643196;3.06161;0.828745;8;GGGAGGTG;GCAAGGCATGATGGGAAATC;-!GCR2#MA0305.1;0;0.00696424;3.31498;0.828745;7;GGGAGGTG;AGGAAGC;-!GABPA#MA0062.2;2;0.00883277;4.2044;0.885212;8;GGGAGGTG;ACCGGAAGAG;+!SP1#MA0079.2;2;0.00929845;4.42606;0.885212;8;GGGAGGTG;GGGGGCGGGG;-!AFT2#MA0270.1;0;0.0162485;7.73427;1;8;GGGAGGTG;GGGGTGTG;-!SP1#MA0079.2;1;0.0167365;7.96659;1;8;GGGAGGTG;GGGGCGGGGT;+!HIF1A::ARNT#MA0259.1;-1;0.0170072;8.09543;1;7;GGGAGGTG;GGACGTGC;+!RXR::RAR_DR5#MA0159.1;8;0.0189417;9.01625;1;8;GGGAGGTG;AGGTCATGGAGAGGTCA;+!ELK4#MA0076.1;2;0.0197422;9.39727;1;7;GGGAGGTG;ACCGGAAGT;+
}}
}}

Latest revision as of 12:31, 7 September 2012

Full Name: motif588

Motif matrix
POACGT
0137792114794466818366
02001123050
03001123050
04112305000
053885958205340914217
06194243881059750
07000112305
0811157165756676217811

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPI1#MA0080.200.0006467950.3078740.6157497GGGAGGTGAGGAAGT+
ELF5#MA0136.110.00187210.8911180.7771768GGGAGGTGAAGGAAGTA-
GABPA#MA0062.210.002449531.165980.7771768GGGAGGTGCCGGAAGTGGC+
STAT1#MA0137.270.003265441.554350.7771768GGGAGGTGGGTTTCCGGGAAATG-
FEV#MA0156.110.005228832.488920.8287457GGGAGGTGCAGGAAAT+
SPI1#MA0080.200.005938722.826830.8287456GGGAGGTGCGGAAG+
znf143#MA0088.1120.006431963.061610.8287458GGGAGGTGGCAAGGCATGATGGGAAATC-
GCR2#MA0305.100.006964243.314980.8287457GGGAGGTGAGGAAGC-
GABPA#MA0062.220.008832774.20440.8852128GGGAGGTGACCGGAAGAG+
SP1#MA0079.220.009298454.426060.8852128GGGAGGTGGGGGGCGGGG-
AFT2#MA0270.100.01624857.7342718GGGAGGTGGGGGTGTG-
SP1#MA0079.210.01673657.9665918GGGAGGTGGGGGCGGGGT+
HIF1A::ARNT#MA0259.1-10.01700728.0954317GGGAGGTGGGACGTGC+
RXR::RAR_DR5#MA0159.180.01894179.0162518GGGAGGTGAGGTCATGGAGAGGTCA+
ELK4#MA0076.120.01974229.3972717GGGAGGTGACCGGAAGT+
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