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MacroAPE 1083:CNhs11842 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;44.82731805732442;55.43746016644713;74.49467298498233;595.3587673662641!2;0.5268201944061424;277.6276128988655;202.28239039038712;289.681395...")
 
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I6;0.151907!10455-106G5;0.0262964!10534-107G3;0.464918!10429-106D6;0.237799!10464-106H5;0.111471!10827-111C8;0.105379!10789-110H6;0.470797!10828-111C9;0.620853!10788-110H5;0.779097!10792-110H9;0.179062!10765-110E9;0.845274!10829-111D1;0.516964!10830-111D2;0.101464!10831-111D3;0.892306!10832-111D4;0.637186!10833-111D5;0.316752!10764-110E8;0.228878!10770-110F5;0.892048!10399-106A3;0.51802!10400-106A4;0.15369!10405-106A9;0.198915!10834-111D6;0.222204!10835-111D7;0.264112!10836-111D8;0.0147671!10837-111D9;0.112738!10699-109G6;0.0440422!10802-111A1;0.207355!10796-110I4;0.235063!10010-101C1;0.00542379!10810-111A9;0.0692501!10421-106C7;6.87388e-05!10708-109H6;0.759497!12235-129G3;0.0085114!12236-129G4;0.882611!12237-129G5;0.214155!10167-103B5;0.7456!10151-102I7;0.603885!10428-106D5;0.405257!10795-110I3;0.0157238!10805-111A4;0.198713!10052-101G7;0.00010335!10189-103D9;0.0160713!10589-108D4;0.00969444!10425-106D2;0.00256199!10427-106D4;0.72645!10702-109G9;0.656082!10432-106D9;0.204988!10496-107C1;0.00417483!10718-109I7;0.194771!10011-101C2;0.258903!10053-101G8;0.0209126!10686-109F2;0.0233374!10084-102B3;0.146252!10012-101C3;0.508188!10085-102B4;0.384245!10482-107A5;0.914832!10419-106C5;0.0116592!10080-102A8;0.0220403!10760-110E4;0.694447!10709-109H7;0.000596861!10710-109H8;0.000459179!10703-109H1;0.0307587!10719-109I8;0.00287994!10642-109A3;0.0520773!10177-103C6;0.00595815!10164-103B2;0.680796!10173-103C2;0.481525!10166-103B4;0.881624!10083-102B2;0.536674!10188-103D8;0.618251!10552-107I3;0.374984!10553-107I4;0.000167542!10013-101C4;0.0945519!10536-107G5;0.0108614!10618-108G6;0.487577!10423-106C9;0.0141865!10785-110H2;0.142103!12238-129G6;0.0360081!12239-129G7;0.11822!12240-129G8;0.518365!10416-106C2;0.0981441!10801-110I9;0.473783!10766-110F1;0.700696!10824-111C5;0.252823!10825-111C6;0.0116177!10826-111C7;0.0147919!10454-106G4;0.0219378!10409-106B4;0.0101919!10638-108I8;0.304034!10636-108I6;0.00595035!10513-107D9;0.0128916!10420-106C6;0.00498395!10082-102B1;0.000108536!10014-101C5;0.0928536!10070-101I7;0.0492804!10452-106G2;0.0197884!10453-106G3;0.0968491!10449-106F8;0.173565!10042-101F6;0.187565!10069-101I6;0.19458!10193-103E4;0.457404!10631-108I1;0.443823!10438-106E6;0.147516!10488-107B2;0.00912042!10196-103E7;0.000835118!10071-101I8;0.232711!10071-101I8;0.106251!10041-101F5;0.800445!10451-106G1;0.00428419!10450-106F9;0.0188967!10604-108F1;0.00948858!10605-108F2;0.111323!10606-108F3;0.0482202!10603-108E9;0.0810606!10497-107C2;0.237946!10448-106F7;0.0852802!10643-109A4;0.087056!10426-106D3;0.00281413!10431-106D8;0.070561!10197-103E8;0.0228696!10443-106F2;0.0394737!10815-111B5;0.157108!10816-111B6;0.00010661!10817-111B7;0.000111606!10015-101C6;8.56993e-05!10410-106B5;0.0740502!10054-101G9;0.00191288!10758-110E2;0.164632!10711-109H9;0.0373902!10040-101F4;0.0678629!10470-106I2;0.495416!10415-106C1;0.000274524!10198-103E9;0.0543673!10614-108G2;0.0997478!10612-108F9;0.0946955!10549-107H9;0.000635548!10615-108G3;6.30927e-05!10487-107B1;0.0140437!10433-106E1;0.00491363!10688-109F4;0.00100723!10444-106F3;0.000148407!10444-106F3;0.294921!10485-107A8;0.393641!10413-106B8;0.152454!10175-103C4;0.221712!10161-103A8;0.668186!12131-128D7;0.398358!10624-108H3;0.675217!10712-109I1;0.291444!10205-103F7;0.422331!10206-103F8;0.079949!10207-103F9;0.131883!10050-101G5;0.0715079!10051-101G6;0.997205!10016-101C7;0.369749!10046-101G1;0.304411!10778-110G4;0.268426!10633-108I3;0.377828!10818-111B8;0.00447463!10819-111B9;0.00274869!10820-111C1;0.00364921!10484-107A7;0.00400547!10808-111A7;0.000605377!10169-103B7;0.112357!10153-102I9;0.66051!13425-144D5;0.382957!13433-144E4;0.0446973!13437-144E8;0.0225898!11904-125F5;0.0324175!11905-125F6;0.785105!10039-101F3;0.442064!10791-110H8;0.494941!10017-101C8;0.124668!10045-101F9;0.181256!10509-107D5;0.172947!10839-111E2;0.00010919!10692-109F8;0.0925391!10079-102A7;0.00838887!10078-102A6;0.122369!10721-110A1;0.426737!10569-108B2;0.00832642!10570-108B3;0.940421!10571-108B4;0.252634!10647-109A8;0.868438!10752-110D5;0.00534049!10782-110G8;0.23865!10726-110A6;0.711029!10018-101C9;0.00159612!10086-102B5;0.606499!10182-103D2;0.682329!10165-103B3;0.530181!10499-107C4;0.428866!10408-106B3;0.0130804!10019-101D1;0.072308!10068-101I5;0.135951!10075-102A3;0.108042!10077-102A5;0.288352!10727-110A7;0.0498393!10775-110G1;0.440835!10412-106B7;0.332904!12231-129F8;0.448482!12232-129F9;0.420678!12233-129G1;0.461374!12234-129G2;0.298857!10414-106B9;0.663344!10170-103B8;0.0116108!10183-103D3;0.79118!10150-102I6;0.599775!10174-103C3;0.458039!10155-103A2;0.374847!10038-101F2;0.184018!10838-111E1;0.200529!10759-110E3;0.0399254!10514-107E1;0.066496!10465-106H6;3.70277e-05!10691-109F7;0.0308583!10843-111E6;0.430964!10844-111E7;0.0222128!11747-123G1;0.0870165!11748-123G2;0.594912!11749-123G3;0.539209!11750-123G4;0.45348!11751-123G5;0.251792!11840-124H4;0.155044!11752-123G6;0.13165!11753-123G7;0.576725!11754-123G8;0.311274!11755-123G9;0.30341!11756-123H1;0.757616!11833-124G6;0.638048!11760-123H5;0.220358!11836-124G9;0.778293!11758-123H3;0.189983!11835-124G8;0.217529!11762-123H7;0.198586!11838-124H2;0.0838223!11757-123H2;0.0995861!11759-123H4;0.640375!11761-123H6;0.967171!11842-124H6;0.163299!11837-124H1;0.336535!10568-108B1;0.139579!13230-141I8;0.392054!13231-141I9;0.254557!10696-109G3;0.262582!10493-107B7;0.835324!10494-107B8;0.0592813!10850-111F4;0.580446!10851-111F5;0.00401413!10852-111F6;0.303375!10853-111F7;0.383838!10854-111F8;0.0150437!10855-111F9;0.128565!10856-111G1;0.979542!10847-111F1;0.264875!10846-111E9;0.0663634!10848-111F2;0.00563596!10845-111E8;0.0639461!10857-111G2;0.101422!10858-111G3;0.0378171!10156-103A3;0.0313132!11901-125F2;0.509758!11902-125F3;0.990522!11903-125F4;0.777403!10689-109F5;0.894042!10648-109A9;0.0165663!10784-110H1;0.0182332!10744-110C6;0.00627404!10772-110F7;0.399014!10474-106I6;0.287903!10600-108E6;0.598698!10684-109E9;0.0787044!12226-129F3;0.202092!12227-129F4;0.0318316!10508-107D4;0.0853257!10539-107G8;0.0218835!10607-108F4;0.0325633!10555-107I6;0.0148915!10774-110F9;0.00976775!10637-108I7;0.00244278!10663-109C6;0.043681!10728-110A8;0.081017!10729-110A9;0.0164344!10430-106D7;0.344173!10730-110B1;0.0610789!10813-111B3;0.141853!10812-111B2;0.654842!10037-101F1;0.29692!10172-103C1;0.452449!10163-103B1;0.816523!10076-102A4;0.484466!10073-102A1;0.510214!10036-101E9;0.963194!10195-103E6;0.497321!10277-104E7;0.330974!10434-106E2;0.768584!10550-107I1;0.0162265!10545-107H5;0.000613599!10544-107H4;0.0599851!10704-109H2;0.0757887!10510-107D6;0.853261!10558-107I9;0.0600762!10020-101D2;0.268925!10732-110B3;0.110684!10049-101G4;0.967906!10698-109G5;0.422699!10437-106E5;0.102183!10417-106C3;0.184923!10035-101E8;0.0610741!10171-103B9;0.509058!10157-103A4;0.781155!10034-101E7;0.514406!10072-101I9;0.488048!10199-103F1;0.998043!10200-103F2;0.401077!10697-109G4;0.0841225!10723-110A3;0.0981358!10179-103C8;0.200677!10160-103A7;0.80792!10180-103C9;0.865582!10162-103A9;0.735482!10021-101D3;0.900364!10840-111E3;0.0375017!10706-109H4;0.584109!10033-101E6;0.61734!10032-101E5;0.365109!10490-107B4;0.492778!10439-106E7;1.2339e-06!10022-101D4;0.00121459!10176-103C5;0.0468264!10469-106I1;0.649417!10067-101I4;0.00937475!10411-106B6;0.0629187!10471-106I3;0.205609!10030-101E3;0.205846!10475-106I7;0.233907!10787-110H4;0.00463926!10477-106I9;0.000305912!10695-109G2;0.0295737!11771-123I7;0.623292!11772-123I8;0.590582!11773-123I9;0.57883!10093-102C3;0.56382!10442-106F1;0.682661!10442-106F1;0.021248!10201-103F3;0.0149864!10639-108I9;0.123745!11843-124H7;0.120225!11841-124H5;0.265799!10693-109F9;0.0431931!10436-106E4;0.0957731!10483-107A6;0.0174517!10282-104F3;0.0847754!10023-101D5;0.958672!10066-101I3;0.655844!10065-101I2;0.167261!10800-110I8;0.00573234!10610-108F7;0.000324715!10841-111E4;0.00361213!10541-107H1;3.48224e-05!10842-111E5;0.00619976!10562-108A4;0.00661498!10024-101D6;0.00615849!10064-101I1;0.0859809!10609-108F6;0.162393!10048-101G3;0.00499026!10781-110G7;0.229959!10181-103D1;0.00582402!10159-103A6;0.457558!10056-101H2;0.277974!10737-110B8;0.26059!10025-101D7;0.665347!10044-101F8;0.130508!10424-106D1;0.0768051!10463-106H4;0.836843!10616-108G4;0.02895!10486-107A9;0.0199765!10062-101H8;0.00350531!10202-103F4;0.128331!10158-103A5;0.11773!10441-106E9;0.275564!10031-101E4;0.078226!10063-101H9;0.406051!10063-101H9;0.974598!11763-123H8;0.050326!11765-123I1;0.0279326!11768-123I4;0.0324324!10807-111A6;0.337037!10790-110H7;0.028741!10798-110I6;0.0537569!10786-110H3;0.151588!10591-108D6;0.101142!10593-108D8;0.0979524!10590-108D5;0.857025!10026-101D8;0.0154962!10096-102C6;0.959984!10168-103B6;0.0953738!10154-103A1;0.692025!10209-103G2;0.35811!10061-101H7;0.0698139!10027-101D9;0.443742!10043-101F7;0.683353!10783-110G9;0.388913!10028-101E1;0.074071!10060-101H6;0.527671!10203-103F5;0.381806!10059-101H5;0.104833!10047-101G2;0.341392!10029-101E2;0.00490339!10058-101H4;0.00160184!10418-106C4;0.19887!10492-107B6;0.0218229!10694-109G1;0.000882616!10797-110I5;0.923441!10057-101H3;0.0245391!10100-102D1;0.104258!10055-101H1;0.0830942!10204-103F6;0.0738263!10191-103E2;0.254195!10563-108A5;0.00325561
|name=CNhs11842_bl_f0
|name=CNhs11842_bl_f0
|tomtom_result=Trl#MA0205.1;0;0.000579556;0.275869;0.551015;10;TTTCTCTTCCTT;TTGCTCTCTC;+!IRF1#MA0050.1;2;0.00260859;1.24169;0.553004;10;TTTCTCTTCCTT;GGTTTCACTTTC;-!STAT1#MA0137.1;3;0.00272577;1.29747;0.553004;11;TTTCTCTTCCTT;CAGTTTCATTTTCC;-!id1#MA0120.1;1;0.00275418;1.31099;0.553004;11;TTTCTCTTCCTT;TTTTCCTTTTCG;+!AZF1#MA0277.1;0;0.00317853;1.51298;0.553004;9;TTTCTCTTCCTT;TTTCTTTTT;-!HMG-I/Y#MA0045.1;3;0.00348989;1.66119;0.553004;12;TTTCTCTTCCTT;GTTTTTCCATTTGTTG;-!IRF2#MA0051.1;7;0.00775216;3.69003;0.998691;11;TTTCTCTTCCTT;GTTTTGCTTTCACTTTCC;-!SFL1#MA0377.1;3;0.012883;6.13231;0.998691;12;TTTCTCTTCCTT;TTTTATTTCTTCTATTCTCTA;-
}}
}}

Latest revision as of 12:38, 7 September 2012

Full Name: CNhs11842_bl_f0

Motif matrix
POACGT
144.8273180573244255.4374601664471374.49467298498233595.3587673662641
20.5268201944061424277.6276128988655202.28239039038712289.68139509135926
335.919834636457175102.5361162487944720.92262789062864610.7396397991379
40.0531.11763660971380.7425735367737165238.25800842853096
517.36264055670353613.5903491982687830.0739.1652288200456
60.8862489994373306661.133784222432753.1699574351814354.92822791796733
734.82351106846984101.562501085800420.0633.7322064207477
80.05.03552209339883864.28455248441573700.7981439972035
92.1060667691566595317.2750575567483186.39600460014285264.3410896489702
103.897483195174677572.913031223744839.035225998885814154.2724781572133
113.1785634406090786328.36909658530570.0438.57055854910334
1219.472946506312663322.2214224420532.30743319845484396.11641642820064

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.100.0005795560.2758690.55101510TTTCTCTTCCTTTTGCTCTCTC+
IRF1#MA0050.120.002608591.241690.55300410TTTCTCTTCCTTGGTTTCACTTTC-
STAT1#MA0137.130.002725771.297470.55300411TTTCTCTTCCTTCAGTTTCATTTTCC-
id1#MA0120.110.002754181.310990.55300411TTTCTCTTCCTTTTTTCCTTTTCG+
AZF1#MA0277.100.003178531.512980.5530049TTTCTCTTCCTTTTTCTTTTT-
HMG-I/Y#MA0045.130.003489891.661190.55300412TTTCTCTTCCTTGTTTTTCCATTTGTTG-
IRF2#MA0051.170.007752163.690030.99869111TTTCTCTTCCTTGTTTTGCTTTCACTTTCC-
SFL1#MA0377.130.0128836.132310.99869112TTTCTCTTCCTTTTTTATTTCTTCTATTCTCTA-
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