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MacroAPE 1083:CNhs11341 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;438.51819196323737;202.03288052880794;523.0959828745674;122.15459240510837!2;531.9816228116072;109.19587325615083;614.1505577105963;30.47359...")
 
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29A5;0.0160707!12184-129A6;0.0199688!10809-111A8;0.015554!10597-108E3;0.00675618!10717-109I6;0.00067697!10455-106G5;0.0476753!10534-107G3;0.457448!10429-106D6;0.0381475!10464-106H5;0.145349!10827-111C8;0.0960922!10789-110H6;0.357802!10828-111C9;0.365135!10788-110H5;0.712308!10792-110H9;0.789809!10765-110E9;0.677311!10829-111D1;0.710873!10830-111D2;0.89102!10831-111D3;0.381931!10832-111D4;0.845588!10833-111D5;0.543048!10764-110E8;0.496376!10770-110F5;0.0569018!10399-106A3;0.909848!10400-106A4;0.0659608!10405-106A9;0.0496839!10834-111D6;0.0701237!10835-111D7;0.593128!10836-111D8;0.131037!10837-111D9;0.126646!10699-109G6;0.641139!10802-111A1;0.619699!10796-110I4;0.250297!10010-101C1;0.258951!10810-111A9;0.000328421!10421-106C7;0.000204568!10708-109H6;0.838923!12235-129G3;0.00424776!12236-129G4;0.0551632!12237-129G5;0.253567!10167-103B5;0.166085!10151-102I7;0.117385!10428-106D5;0.241166!10795-110I3;0.0181307!10805-111A4;0.241081!10052-101G7;0.000763209!10189-103D9;0.00251704!10589-108D4;0.000134673!10425-106D2;0.00590756!10427-106D4;2.45621e-06!10702-109G9;0.351085!10432-106D9;0.284268!10496-107C1;0.100182!10718-109I7;0.614161!10011-101C2;0.453391!10053-101G8;0.00274274!10686-109F2;0.010818!10084-102B3;0.535369!10012-101C3;0.43152!10085-102B4;0.385371!10482-107A5;0.0150148!10419-106C5;0.00322465!10080-102A8;0.0172147!10760-110E4;0.0102553!10709-109H7;0.0886441!10710-109H8;0.0468259!10703-109H1;0.00472487!10719-109I8;0.000538278!10642-109A3;0.00199659!10177-103C6;2.95216e-06!10164-103B2;0.282333!10173-103C2;0.171971!10166-103B4;0.0384764!10083-102B2;0.0554326!10188-103D8;0.102106!10552-107I3;0.302625!10553-107I4;0.0271212!10013-101C4;0.0144689!10536-107G5;0.00343726!10618-108G6;5.54491e-05!10423-106C9;0.180651!10785-110H2;0.196829!12238-129G6;0.149664!12239-129G7;1.90545e-05!12240-129G8;0.0872975!10416-106C2;1.92595e-08!10801-110I9;0.93181!10766-110F1;0.818815!10824-111C5;0.722517!10825-111C6;0.137821!10826-111C7;0.128756!10454-106G4;0.186478!10409-106B4;0.19114!10638-108I8;0.553529!10636-108I6;0.00615355!10513-107D9;0.0760852!10420-106C6;0.0866405!10082-102B1;0.000251331!10014-101C5;0.00441362!10070-101I7;0.000518238!10452-106G2;0.0112555!10453-106G3;0.000685079!10449-106F8;0.00099161!10042-101F6;0.000622968!10069-101I6;0.647049!10193-103E4;0.000152938!10631-108I1;0.388858!10438-106E6;0.127485!10488-107B2;0.0184187!10196-103E7;0.0353055!10071-101I8;0.100046!10071-101I8;0.00289767!10041-101F5;0.00240575!10451-106G1;0.00701632!10450-106F9;0.000395558!10604-108F1;0.000650368!10605-108F2;0.0100572!10606-108F3;0.0241184!10603-108E9;0.00524805!10497-107C2;0.00982047!10448-106F7;0.364689!10643-109A4;0.0572822!10426-106D3;0.0432934!10431-106D8;0.152343!10197-103E8;0.0174247!10443-106F2;0.000501797!10815-111B5;0.0788023!10816-111B6;0.0425807!10817-111B7;0.0168134!10015-101C6;0.036987!10410-106B5;0.000131798!10054-101G9;0.0321104!10758-110E2;0.0262064!10711-109H9;0.000189118!10040-101F4;0.000316541!10470-106I2;0.148101!10415-106C1;0.0723367!10198-103E9;0.151056!10614-108G2;0.000103521!10612-108F9;0.159048!10549-107H9;0.00366841!10615-108G3;0.000258727!10487-107B1;0.000118153!10433-106E1;0.521303!10688-109F4;0.00215674!10444-106F3;0.0693486!10444-106F3;6.02054e-05!10485-107A8;1.80383e-05!10413-106B8;1.58954e-05!10175-103C4;0.000242119!10161-103A8;0.448555!12131-128D7;0.896071!10624-108H3;0.0412863!10712-109I1;0.0765804!10205-103F7;0.274801!10206-103F8;0.000906903!10207-103F9;0.0013595!10050-101G5;0.00216801!10051-101G6;1.16791e-05!10016-101C7;1.48121e-05!10046-101G1;3.23352e-05!10778-110G4;0.00119627!10633-108I3;0.495536!10818-111B8;0.00549078!10819-111B9;0.631424!10820-111C1;0.66304!10484-107A7;0.590252!10808-111A7;0.030054!10169-103B7;0.505723!10153-102I9;0.178587!13425-144D5;0.333278!13433-144E4;0.000483118!13437-144E8;0.000228513!11904-125F5;0.000797734!11905-125F6;0.879327!10039-101F3;0.650376!10791-110H8;0.177071!10017-101C8;0.0559085!10045-101F9;0.00476871!10509-107D5;0.0616936!10839-111E2;0.00230187!10692-109F8;0.00796213!10079-102A7;0.00889629!10078-102A6;5.82906e-05!10721-110A1;2.14926e-06!10569-108B2;0.026605!10570-108B3;0.10128!10571-108B4;0.0476821!10647-109A8;0.106404!10752-110D5;2.96799e-05!10782-110G8;0.147945!10726-110A6;0.0824125!10018-101C9;0.00345076!10086-102B5;0.00128944!10182-103D2;0.000165561!10165-103B3;0.586263!10499-107C4;0.819901!10408-106B3;0.0235082!10019-101D1;0.305811!10068-101I5;0.000127607!10075-102A3;0.0282655!10077-102A5;5.84576e-05!10727-110A7;5.34644e-08!10775-110G1;0.499335!10412-106B7;0.328321!12231-129F8;0.321171!12232-129F9;0.56412!12233-129G1;0.319223!12234-129G2;0.636124!10414-106B9;0.634594!10170-103B8;0.000339823!10183-103D3;0.084191!10150-102I6;0.138893!10174-103C3;0.210523!10155-103A2;0.554309!10038-101F2;0.732401!10838-111E1;0.561261!10759-110E3;0.0013285!10514-107E1;3.73028e-05!10465-106H6;0.00203326!10691-109F7;0.000185659!10843-111E6;0.780573!10844-111E7;0.000296798!11747-123G1;0.00116523!11748-123G2;0.263271!11749-123G3;0.276316!11750-123G4;0.149778!11751-123G5;0.162075!11840-124H4;0.0596816!11752-123G6;0.00678798!11753-123G7;0.119492!11754-123G8;0.039704!11755-123G9;0.106801!11756-123H1;0.509342!11833-124G6;0.462752!11760-123H5;0.286387!11836-124G9;0.760186!11758-123H3;0.0817992!11835-124G8;0.206846!11762-123H7;0.0831075!11838-124H2;0.0645602!11757-123H2;0.0733527!11759-123H4;0.130721!11761-123H6;0.68144!11842-124H6;0.313813!11837-124H1;0.148257!10568-108B1;0.187867!13230-141I8;0.294041!13231-141I9;0.0838744!10696-109G3;0.128323!10493-107B7;0.123527!10494-107B8;0.000104873!10850-111F4;0.0150218!10851-111F5;0.0148593!10852-111F6;0.00850102!10853-111F7;0.0705719!10854-111F8;0.000200136!10855-111F9;0.0012237!10856-111G1;0.739388!10847-111F1;0.112961!10846-111E9;5.17442e-06!10848-111F2;0.00447203!10845-111E8;0.0325453!10857-111G2;0.0229233!10858-111G3;0.00228795!10156-103A3;0.0280971!11901-125F2;0.256571!11902-125F3;0.865325!11903-125F4;0.643493!10689-109F5;0.944852!10648-109A9;6.66632e-06!10784-110H1;0.0839213!10744-110C6;0.0264455!10772-110F7;0.512151!10474-106I6;0.108039!10600-108E6;0.882311!10684-109E9;0.00709871!12226-129F3;0.0647439!12227-129F4;0.351093!10508-107D4;0.332751!10539-107G8;0.000329888!10607-108F4;9.52368e-06!10555-107I6;6.01372e-05!10774-110F9;0.00061961!10637-108I7;0.0888119!10663-109C6;0.000403858!10728-110A8;0.00199071!10729-110A9;0.00621503!10430-106D7;0.469865!10730-110B1;0.00818697!10813-111B3;4.82346e-05!10812-111B2;0.775051!10037-101F1;0.386277!10172-103C1;0.213301!10163-103B1;0.0576748!10076-102A4;0.275692!10073-102A1;0.137583!10036-101E9;0.00368971!10195-103E6;0.213703!10277-104E7;0.283622!10434-106E2;0.851155!10550-107I1;0.0260757!10545-107H5;0.00786796!10544-107H4;0.643103!10704-109H2;0.0425366!10510-107D6;0.94899!10558-107I9;2.33726e-05!10020-101D2;0.000542464!10732-110B3;0.0432591!10049-101G4;0.0536139!10698-109G5;0.13456!10437-106E5;0.221833!10417-106C3;0.00266276!10035-101E8;0.722438!10171-103B9;0.175653!10157-103A4;0.146707!10034-101E7;0.194887!10072-101I9;0.203494!10199-103F1;0.00154443!10200-103F2;0.000202364!10697-109G4;0.000107154!10723-110A3;0.000130032!10179-103C8;0.0798739!10160-103A7;0.359702!10180-103C9;0.401755!10162-103A9;0.0617297!10021-101D3;0.0887386!10840-111E3;5.79099e-06!10706-109H4;0.355867!10033-101E6;0.346088!10032-101E5;0.528855!10490-107B4;0.23299!10439-106E7;0.00521071!10022-101D4;0.0026613!10176-103C5;0.0165163!10469-106I1;0.0821971!10067-101I4;0.030865!10411-106B6;0.954653!10471-106I3;0.93969!10030-101E3;0.619893!10475-106I7;0.0325516!10787-110H4;0.00279581!10477-106I9;0.00373179!10695-109G2;0.0278754!11771-123I7;0.994323!11772-123I8;0.0330429!11773-123I9;0.122527!10093-102C3;0.275948!10442-106F1;0.000457302!10442-106F1;0.0594515!10201-103F3;0.0521398!10639-108I9;0.00685613!11843-124H7;0.00818985!11841-124H5;0.0307765!10693-109F9;0.000514088!10436-106E4;0.00406498!10483-107A6;0.345526!10282-104F3;0.695779!10023-101D5;2.28192e-05!10066-101I3;1.79571e-05!10065-101I2;0.000358582!10800-110I8;0.000321673!10610-108F7;1.00766e-05!10841-111E4;0.0107065!10541-107H1;0.000238501!10842-111E5;0.0009829!10562-108A4;0.0008711!10024-101D6;0.000752506!10064-101I1;9.80496e-05!10609-108F6;0.00347988!10048-101G3;2.27761e-05!10781-110G7;0.0580166!10181-103D1;0.000291109!10159-103A6;0.599152!10056-101H2;0.518758!10737-110B8;0.814223!10025-101D7;0.754712!10044-101F8;1.75689e-07!10424-106D1;3.02245e-06!10463-106H4;0.35556!10616-108G4;0.0583351!10486-107A9;0.328012!10062-101H8;0.258318!10202-103F4;0.0298894!10158-103A5;3.44413e-05!10441-106E9;0.324794!10031-101E4;7.61108e-05!10063-101H9;0.302704!10063-101H9;0.00484954!11763-123H8;0.00276376!11765-123I1;0.0506045!11768-123I4;0.00321892!10807-111A6;0.0438578!10790-110H7;6.56791e-05!10798-110I6;0.0050136!10786-110H3;0.0126247!10591-108D6;0.000904267!10593-108D8;0.00685909!10590-108D5;0.00152775!10026-101D8;0.0232749!10096-102C6;0.0139607!10168-103B6;0.135805!10154-103A1;0.738025!10209-103G2;0.803017!10061-101H7;2.06686e-05!10027-101D9;0.00188844!10043-101F7;0.152766!10783-110G9;0.00418508!10028-101E1;0.00306766!10060-101H6;0.00331861!10203-103F5;0.0263181!10059-101H5;1.57684e-05!10047-101G2;2.04658e-05!10029-101E2;5.87544e-07!10058-101H4;0.000319944!10418-106C4;0.000619232!10492-107B6;0.000421149!10694-109G1;0.00313888!10797-110I5;0.153815!10057-101H3;0.00100885!10100-102D1;6.70704e-05!10055-101H1;0.0578401!10204-103F6;0.235817!10191-103E2;0.100471!10563-108A5;3.49354e-06
|name=CNhs11341_bu_f1
|name=CNhs11341_bu_f1
|tomtom_result=RUNX1#MA0002.2;1;0.00257048;1.22355;1;10;GGGCCCAGGGAG;AAACCACAGAC;-!SWI5#MA0402.1;-2;0.00424123;2.01883;1;8;GGGCCCAGGGAG;AACCAGCA;-!ACE2#MA0267.1;-3;0.00438221;2.08593;1;7;GGGCCCAGGGAG;ACCAGCA;+!YJL103C#MA0427.1;-1;0.00445269;2.11948;1;11;GGGCCCAGGGAG;AGCTCCGGAGA;+!MET28#MA0332.1;-2;0.00900191;4.28491;1;6;GGGCCCAGGGAG;CCACAG;-!PLAG1#MA0163.1;1;0.0112669;5.36306;1;12;GGGCCCAGGGAG;GGGGCCCAAGGGGG;+!Tal1::Gata1#MA0140.1;10;0.0118435;5.63753;1;8;GGGCCCAGGGAG;CTTATCTGTCCCCACCAG;-!RXR::RAR_DR5#MA0159.1;-1;0.0146;6.94961;1;11;GGGCCCAGGGAG;AGGTCATGGAGAGGTCA;+!CUP2#MA0287.1;-5;0.0165608;7.88296;1;7;GGGCCCAGGGAG;CAGCAAAAATG;+!BAS1#MA0278.1;-2;0.0167221;7.95973;1;10;GGGCCCAGGGAG;GCACAGCCAGAGTCAAGTCAA;+!FEV#MA0156.1;-5;0.0189226;9.00716;1;7;GGGCCCAGGGAG;CAGGAAAT;+
}}
}}

Latest revision as of 12:38, 7 September 2012

Full Name: CNhs11341_bu_f1

Motif matrix
POACGT
1438.51819196323737202.03288052880794523.0959828745674122.15459240510837
2531.9816228116072109.19587325615083614.150557710596330.47359399336704
3347.5551427068283126.9215684327215605.9144508523943205.41048577977776
4115.71907334645172902.5034224012508260.825242141110156.753909882907823
5571.8127471936083576.315540767432417.30937986612502120.3639799445558
61.9928554162006311283.80879235551920.00.0
71284.34335260784930.22728473054611830.92480098209388360.30620945123030796
81.14911449173510420.424938832244851131284.11078952165530.11680492608433858
9190.86968738485027486.8442165161867490.51475456961776117.57298930106683
10498.694466770576157.17154582471258532.563203501736397.37243167469632
11551.3783405455833137.95923664908662537.345699752426159.118370824624826
12387.0763903937616157.44971804144848685.340949633527755.934589702983175

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RUNX1#MA0002.210.002570481.22355110GGGCCCAGGGAGAAACCACAGAC-
SWI5#MA0402.1-20.004241232.0188318GGGCCCAGGGAGAACCAGCA-
ACE2#MA0267.1-30.004382212.0859317GGGCCCAGGGAGACCAGCA+
YJL103C#MA0427.1-10.004452692.11948111GGGCCCAGGGAGAGCTCCGGAGA+
MET28#MA0332.1-20.009001914.2849116GGGCCCAGGGAGCCACAG-
PLAG1#MA0163.110.01126695.36306112GGGCCCAGGGAGGGGGCCCAAGGGGG+
Tal1::Gata1#MA0140.1100.01184355.6375318GGGCCCAGGGAGCTTATCTGTCCCCACCAG-
RXR::RAR_DR5#MA0159.1-10.01466.94961111GGGCCCAGGGAGAGGTCATGGAGAGGTCA+
CUP2#MA0287.1-50.01656087.8829617GGGCCCAGGGAGCAGCAAAAATG+
BAS1#MA0278.1-20.01672217.95973110GGGCCCAGGGAGGCACAGCCAGAGTCAAGTCAA+
FEV#MA0156.1-50.01892269.0071617GGGCCCAGGGAGCAGGAAAT+
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