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MacroAPE 1083:Motif935: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;2086;122272;24657!02;0;15163;133852;0!03;149015;0;0;0!04;11010;21912;112446;3647!05;0;149015;0;0!06;0;149015;0;0 |macroape_1083_sample_p...")
 
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;0.134664!12179-129A1;0.486249!12180-129A2;0.176622!12181-129A3;0.182218!12176-128I7;0.503073!12177-128I8;0.133334!12182-129A4;0.0959764!12183-129A5;0.210062!12184-129A6;0.105045!10809-111A8;0.49203!10597-108E3;0.285406!10717-109I6;0.748717!10455-106G5;0.270119!10534-107G3;0.00204259!10429-106D6;0.0362417!10464-106H5;0.0296946!10827-111C8;0.0285344!10789-110H6;0.00428565!10828-111C9;0.0178433!10788-110H5;0.0208928!10792-110H9;0.01978!10765-110E9;0.00910115!10829-111D1;0.00528866!10830-111D2;0.00569856!10831-111D3;0.0160088!10832-111D4;0.00716186!10833-111D5;0.00759855!10764-110E8;0.0083547!10770-110F5;0.00920029!10399-106A3;0.00212241!10400-106A4;0.00682996!10405-106A9;0.0054903!10834-111D6;0.00861494!10835-111D7;0.0023835!10836-111D8;0.00752951!10837-111D9;0.0411953!10699-109G6;0.0205663!10802-111A1;0.0916011!10796-110I4;0.0382857!10010-101C1;0.0147171!10810-111A9;0.0636837!10421-106C7;0.108763!10708-109H6;0.005135!12235-129G3;0.212453!12236-129G4;0.411205!12237-129G5;0.344649!10167-103B5;0.133694!10151-102I7;0.351031!10428-106D5;0.176897!10795-110I3;0.50996!10805-111A4;0.00365082!10052-101G7;0.520642!10189-103D9;0.0139928!10589-108D4;0.0496113!10425-106D2;0.124658!10427-106D4;0.737413!10702-109G9;0.00637297!10432-106D9;0.049164!10496-107C1;0.122429!10718-109I7;0.00213623!10011-101C2;0.00490464!10053-101G8;0.0305471!10686-109F2;0.336138!10084-102B3;0.142936!10012-101C3;0.128822!10085-102B4;0.200594!10482-107A5;0.126018!10419-106C5;0.282843!10080-102A8;0.245266!10760-110E4;0.0138944!10709-109H7;0.0894843!10710-109H8;0.260336!10703-109H1;0.0626378!10719-109I8;0.700262!10642-109A3;0.482817!10177-103C6;0.971841!10164-103B2;0.284269!10173-103C2;0.232362!10166-103B4;0.557727!10083-102B2;0.278699!10188-103D8;0.278872!10552-107I3;0.162109!10553-107I4;0.001635!10013-101C4;0.657974!10536-107G5;0.0137568!10618-108G6;0.614001!10423-106C9;0.0420449!10785-110H2;0.0052252!12238-129G6;0.079116!12239-129G7;0.720857!12240-129G8;0.105077!10416-106C2;0.845627!10801-110I9;0.00249226!10766-110F1;0.0335473!10824-111C5;0.0202344!10825-111C6;0.0458256!10826-111C7;0.0551124!10454-106G4;0.0453038!10409-106B4;0.0117306!10638-108I8;0.0308857!10636-108I6;0.0538259!10513-107D9;0.0679547!10420-106C6;0.078655!10082-102B1;0.28475!10014-101C5;0.0212803!10070-101I7;0.0501881!10452-106G2;0.0187283!10453-106G3;0.0133684!10449-106F8;0.00178932!10042-101F6;0.0028589!10069-101I6;0.0771024!10193-103E4;0.0931194!10631-108I1;0.294644!10438-106E6;0.00295896!10488-107B2;0.00162483!10196-103E7;0.060535!10071-101I8;0.0259206!10071-101I8;0.0622491!10041-101F5;0.312102!10451-106G1;0.015603!10450-106F9;0.0385076!10604-108F1;0.0859501!10605-108F2;0.781594!10606-108F3;0.298486!10603-108E9;0.555668!10497-107C2;0.613822!10448-106F7;0.398766!10643-109A4;0.134593!10426-106D3;0.047668!10431-106D8;0.237719!10197-103E8;0.173093!10443-106F2;0.085329!10815-111B5;0.403118!10816-111B6;0.00321486!10817-111B7;0.00564334!10015-101C6;0.00432349!10410-106B5;0.099483!10054-101G9;0.220103!10758-110E2;0.0528398!10711-109H9;0.654068!10040-101F4;0.289553!10470-106I2;0.258845!10415-106C1;0.0825375!10198-103E9;0.414441!10614-108G2;0.0185113!10612-108F9;0.184883!10549-107H9;0.0550322!10615-108G3;0.222734!10487-107B1;0.102919!10433-106E1;0.00235233!10688-109F4;0.303067!10444-106F3;0.170625!10444-106F3;0.959812!10485-107A8;0.965434!10413-106B8;0.168681!10175-103C4;0.466517!10161-103A8;0.173434!12131-128D7;0.111569!10624-108H3;0.412797!10712-109I1;0.132159!10205-103F7;0.0113297!10206-103F8;0.0264444!10207-103F9;0.0421747!10050-101G5;0.00907867!10051-101G6;0.190312!10016-101C7;0.121379!10046-101G1;0.0641671!10778-110G4;0.0220088!10633-108I3;0.00125631!10818-111B8;0.731475!10819-111B9;0.0337036!10820-111C1;0.0316005!10484-107A7;0.027949!10808-111A7;0.0235349!10169-103B7;0.002986!10153-102I9;0.251858!13425-144D5;0.12458!13433-144E4;0.720152!13437-144E8;0.740015!11904-125F5;0.917897!11905-125F6;0.134787!10039-101F3;0.459129!10791-110H8;0.210529!10017-101C8;0.191132!10045-101F9;0.129915!10509-107D5;0.000946528!10839-111E2;0.27491!10692-109F8;0.00146628!10079-102A7;0.512793!10078-102A6;0.104182!10721-110A1;0.167033!10569-108B2;0.206749!10570-108B3;0.497659!10571-108B4;0.857159!10647-109A8;0.422405!10752-110D5;0.798994!10782-110G8;0.0126533!10726-110A6;0.497248!10018-101C9;0.741636!10086-102B5;0.718819!10182-103D2;0.642001!10165-103B3;0.14812!10499-107C4;0.156344!10408-106B3;0.0525755!10019-101D1;0.708556!10068-101I5;0.0659675!10075-102A3;0.0157886!10077-102A5;0.0791377!10727-110A7;0.301193!10775-110G1;6.03759e-05!10412-106B7;0.000351998!12231-129F8;0.00984278!12232-129F9;0.364572!12233-129G1;0.217695!12234-129G2;0.36998!10414-106B9;0.85543!10170-103B8;0.0922075!10183-103D3;0.438595!10150-102I6;0.328737!10174-103C3;0.181274!10155-103A2;0.127474!10038-101F2;0.0801206!10838-111E1;0.073335!10759-110E3;0.642437!10514-107E1;0.573842!10465-106H6;0.0072242!10691-109F7;0.114039!10843-111E6;0.580098!10844-111E7;0.657244!11747-123G1;0.812134!11748-123G2;0.987024!11749-123G3;0.589846!11750-123G4;0.591396!11751-123G5;0.180842!11840-124H4;0.14763!11752-123G6;0.459518!11753-123G7;0.603469!11754-123G8;0.130341!11755-123G9;0.451821!11756-123H1;0.864372!11833-124G6;0.0812282!11760-123H5;0.0423734!11836-124G9;0.0138973!11758-123H3;0.471271!11835-124G8;0.0686149!11762-123H7;0.0161169!11838-124H2;0.00156745!11757-123H2;0.0266248!11759-123H4;0.77972!11761-123H6;0.0317495!11842-124H6;0.018476!11837-124H1;0.00134694!10568-108B1;0.00650587!13230-141I8;0.48442!13231-141I9;0.288577!10696-109G3;0.298677!10493-107B7;0.0135804!10494-107B8;0.222079!10850-111F4;0.465146!10851-111F5;0.452214!10852-111F6;0.379238!10853-111F7;0.80707!10854-111F8;0.286501!10855-111F9;0.891828!10856-111G1;0.0766622!10847-111F1;0.843738!10846-111E9;0.994476!10848-111F2;0.68174!10845-111E8;0.265295!10857-111G2;0.241762!10858-111G3;0.0328629!10156-103A3;0.0559984!11901-125F2;0.178912!11902-125F3;0.00455595!11903-125F4;0.0471824!10689-109F5;0.0265031!10648-109A9;0.0250282!10784-110H1;0.0821279!10744-110C6;0.0920937!10772-110F7;0.00181698!10474-106I6;0.0225075!10600-108E6;1.02623e-05!10684-109E9;0.793565!12226-129F3;0.414318!12227-129F4;0.0884009!10508-107D4;0.0686005!10539-107G8;0.973106!10607-108F4;0.879237!10555-107I6;0.230047!10774-110F9;0.733002!10637-108I7;0.0331775!10663-109C6;0.335662!10728-110A8;0.313219!10729-110A9;0.595591!10430-106D7;0.000593923!10730-110B1;0.0602518!10813-111B3;0.374433!10812-111B2;0.00457811!10037-101F1;0.225415!10172-103C1;0.205884!10163-103B1;0.416938!10076-102A4;0.156914!10073-102A1;0.285577!10036-101E9;0.37184!10195-103E6;0.153149!10277-104E7;0.194976!10434-106E2;0.164754!10550-107I1;0.0729496!10545-107H5;0.0780526!10544-107H4;0.15442!10704-109H2;0.230437!10510-107D6;0.000633943!10558-107I9;0.84212!10020-101D2;0.718801!10732-110B3;0.00907363!10049-101G4;0.307896!10698-109G5;0.619848!10437-106E5;0.00836618!10417-106C3;0.0390159!10035-101E8;0.411459!10171-103B9;0.230832!10157-103A4;0.363855!10034-101E7;0.210365!10072-101I9;0.205244!10199-103F1;0.465904!10200-103F2;0.331806!10697-109G4;0.0683763!10723-110A3;0.134991!10179-103C8;0.35935!10160-103A7;0.339053!10180-103C9;0.458108!10162-103A9;0.646963!10021-101D3;0.607006!10840-111E3;0.11462!10706-109H4;0.00113806!10033-101E6;0.703467!10032-101E5;0.255225!10490-107B4;0.194515!10439-106E7;0.104347!10022-101D4;0.140018!10176-103C5;0.00951019!10469-106I1;0.288007!10067-101I4;0.250559!10411-106B6;0.00473945!10471-106I3;0.60121!10030-101E3;0.106346!10475-106I7;0.0131221!10787-110H4;0.304821!10477-106I9;0.204187!10695-109G2;0.640876!11771-123I7;0.0010291!11772-123I8;0.142681!11773-123I9;0.794649!10093-102C3;0.0866912!10442-106F1;0.397851!10442-106F1;0.026308!10201-103F3;0.0435427!10639-108I9;0.0819112!11843-124H7;0.360886!11841-124H5;0.330743!10693-109F9;0.230908!10436-106E4;0.352804!10483-107A6;0.0203855!10282-104F3;0.140256!10023-101D5;0.782726!10066-101I3;0.326875!10065-101I2;0.0809129!10800-110I8;0.132243!10610-108F7;0.572719!10841-111E4;0.750166!10541-107H1;0.0722667!10842-111E5;0.365323!10562-108A4;0.518068!10024-101D6;0.532321!10064-101I1;0.165283!10609-108F6;0.0561785!10048-101G3;0.0344674!10781-110G7;0.0251508!10181-103D1;0.89782!10159-103A6;0.114116!10056-101H2;0.140961!10737-110B8;0.0707557!10025-101D7;0.00148962!10044-101F8;0.277719!10424-106D1;0.0235522!10463-106H4;0.0042954!10616-108G4;0.112097!10486-107A9;0.225285!10062-101H8;0.00612774!10202-103F4;0.00906888!10158-103A5;0.266995!10441-106E9;0.101887!10031-101E4;0.720558!10063-101H9;0.140383!10063-101H9;0.330916!11763-123H8;0.114334!11765-123I1;0.0379304!11768-123I4;0.0532515!10807-111A6;0.175776!10790-110H7;0.847242!10798-110I6;0.470983!10786-110H3;0.519901!10591-108D6;0.958267!10593-108D8;0.611564!10590-108D5;0.676862!10026-101D8;0.187475!10096-102C6;0.450451!10168-103B6;0.268076!10154-103A1;0.27585!10209-103G2;0.153588!10061-101H7;0.236107!10027-101D9;0.0451243!10043-101F7;0.147578!10783-110G9;0.376817!10028-101E1;0.983105!10060-101H6;0.0344329!10203-103F5;0.0168317!10059-101H5;0.260581!10047-101G2;0.206417!10029-101E2;0.349171!10058-101H4;0.124876!10418-106C4;0.07297!10492-107B6;0.311286!10694-109G1;0.102314!10797-110I5;0.000209239!10057-101H3;0.680709!10100-102D1;0.0989642!10055-101H1;0.00635362!10204-103F6;0.00388875!10191-103E2;0.00514501!10563-108A5;0.0822092
|name=motif935
|name=motif935
|tomtom_result=TBS1#MA0404.1;1;0.00158245;0.753247;1;6;GGAGCC;CGGATCCG;+!che-1#MA0260.1;0;0.00861384;4.10019;1;6;GGAGCC;GAAACC;+!GCR1#MA0304.1;2;0.0108296;5.1549;1;6;GGAGCC;TGGAAGCC;+!NRG1#MA0347.1;6;0.0136102;6.47847;1;6;GGAGCC;TGCGATGGACCCTGATCTAG;-!brk#MA0213.1;2;0.0153811;7.32141;1;6;GGAGCC;CTGGCGCC;+!CRZ1#MA0285.1;1;0.0177576;8.4526;1;6;GGAGCC;CTAAGCCAC;+
}}
}}

Latest revision as of 12:39, 7 September 2012

Full Name: motif935

Motif matrix
POACGT
010208612227224657
020151631338520
03149015000
0411010219121124463647
05014901500
06014901500

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TBS1#MA0404.110.001582450.75324716GGAGCCCGGATCCG+
che-1#MA0260.100.008613844.1001916GGAGCCGAAACC+
GCR1#MA0304.120.01082965.154916GGAGCCTGGAAGCC+
NRG1#MA0347.160.01361026.4784716GGAGCCTGCGATGGACCCTGATCTAG-
brk#MA0213.120.01538117.3214116GGAGCCCTGGCGCC+
CRZ1#MA0285.110.01775768.452616GGAGCCCTAAGCCAC+
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