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MacroAPE 1083:CNhs10846 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;165.6975356924513;118.77300799628162;96.27044437731784;48.54849093969905!2;61.34217506324883;83.64683969244633;40.776186642073725;243.524277...")
 
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10464-106H5;0.359362!10827-111C8;0.430886!10789-110H6;0.2!10828-111C9;0.0697544!10788-110H5;0.103317!10792-110H9;0.582201!10765-110E9;0.0890458!10829-111D1;0.522475!10830-111D2;0.700884!10831-111D3;0.384909!10832-111D4;0.228931!10833-111D5;0.565359!10764-110E8;0.677128!10770-110F5;0.184599!10399-106A3;0.209535!10400-106A4;0.434573!10405-106A9;0.555525!10834-111D6;0.484177!10835-111D7;0.726481!10836-111D8;0.321999!10837-111D9;0.209537!10699-109G6;0.457375!10802-111A1;0.93961!10796-110I4;0.238577!10010-101C1;0.0189438!10810-111A9;0.556697!10421-106C7;0.323383!10708-109H6;0.944279!12235-129G3;0.131528!12236-129G4;0.929311!12237-129G5;0.516572!10167-103B5;0.667323!10151-102I7;0.0100511!10428-106D5;0.0389171!10795-110I3;0.559483!10805-111A4;0.121986!10052-101G7;0.995871!10189-103D9;0.0782603!10589-108D4;0.509225!10425-106D2;0.591923!10427-106D4;0.297341!10702-109G9;0.135866!10432-106D9;0.189422!10496-107C1;0.270838!10718-109I7;0.358785!10011-101C2;0.546038!10053-101G8;0.142396!10686-109F2;5.42523e-05!10084-102B3;0.84322!10012-101C3;0.0305059!10085-102B4;0.0133551!10482-107A5;0.0779313!10419-106C5;0.0384742!10080-102A8;0.259892!10760-110E4;0.497168!10709-109H7;0.237375!10710-109H8;0.00368523!10703-109H1;0.0690255!10719-109I8;0.541172!10642-109A3;0.611082!10177-103C6;0.489625!10164-103B2;0.0143202!10173-103C2;0.0320551!10166-103B4;0.0136475!10083-102B2;0.014367!10188-103D8;0.0614807!10552-107I3;0.0134118!10553-107I4;0.183386!10013-101C4;0.132286!10536-107G5;0.119044!10618-108G6;0.227497!10423-106C9;0.228634!10785-110H2;0.440926!12238-129G6;0.104944!12239-129G7;0.509075!12240-129G8;0.0293739!10416-106C2;0.589732!10801-110I9;0.773567!10766-110F1;0.128687!10824-111C5;0.170657!10825-111C6;0.91567!10826-111C7;0.764244!10454-106G4;0.9568!10409-106B4;0.9709!10638-108I8;0.217019!10636-108I6;0.0057601!10513-107D9;0.339826!10420-106C6;0.293455!10082-102B1;0.258341!10014-101C5;0.957981!10070-101I7;0.729026!10452-106G2;0.703267!10453-106G3;0.269072!10449-106F8;0.296061!10042-101F6;0.316148!10069-101I6;0.0918382!10193-103E4;0.419727!10631-108I1;0.040629!10438-106E6;0.135617!10488-107B2;0.0421504!10196-103E7;0.0261116!10071-101I8;0.68027!10071-101I8;0.466167!10041-101F5;0.0563481!10451-106G1;0.123202!10450-106F9;0.204638!10604-108F1;0.390732!10605-108F2;0.0281246!10606-108F3;0.0201326!10603-108E9;0.016633!10497-107C2;0.0573971!10448-106F7;0.155281!10643-109A4;0.407283!10426-106D3;0.109257!10431-106D8;0.0526542!10197-103E8;0.548807!10443-106F2;0.465895!10815-111B5;0.460217!10816-111B6;0.761706!10817-111B7;0.261811!10015-101C6;0.523999!10410-106B5;0.143277!10054-101G9;0.562503!10758-110E2;0.048311!10711-109H9;0.90802!10040-101F4;0.743191!10470-106I2;0.0112796!10415-106C1;0.0759882!10198-103E9;0.626862!10614-108G2;0.588765!10612-108F9;0.843473!10549-107H9;0.0139124!10615-108G3;0.183443!10487-107B1;0.296656!10433-106E1;0.680075!10688-109F4;0.777344!10444-106F3;0.065853!10444-106F3;0.102453!10485-107A8;0.100325!10413-106B8;0.773216!10175-103C4;0.915209!10161-103A8;0.109158!12131-128D7;0.157182!10624-108H3;0.110313!10712-109I1;0.341996!10205-103F7;0.153962!10206-103F8;0.0655373!10207-103F9;0.0725587!10050-101G5;0.0423627!10051-101G6;0.472877!10016-101C7;0.226147!10046-101G1;0.163583!10778-110G4;0.0567231!10633-108I3;0.45111!10818-111B8;0.225703!10819-111B9;0.445629!10820-111C1;0.566772!10484-107A7;0.582568!10808-111A7;0.157672!10169-103B7;0.542572!10153-102I9;0.00600926!13425-144D5;0.0594967!13433-144E4;0.404092!13437-144E8;0.500448!11904-125F5;0.67406!11905-125F6;0.0982345!10039-101F3;0.0234913!10791-110H8;0.0132226!10017-101C8;0.851752!10045-101F9;0.782085!10509-107D5;0.91033!10839-111E2;0.276855!10692-109F8;0.0653086!10079-102A7;0.03263!10078-102A6;0.361358!10721-110A1;0.266718!10569-108B2;0.406106!10570-108B3;0.686964!10571-108B4;0.696888!10647-109A8;0.387087!10752-110D5;0.647951!10782-110G8;0.0761082!10726-110A6;0.238146!10018-101C9;0.217066!10086-102B5;0.850482!10182-103D2;0.439967!10165-103B3;0.0506183!10499-107C4;0.0477133!10408-106B3;0.171761!10019-101D1;0.426581!10068-101I5;0.541982!10075-102A3;0.0803241!10077-102A5;0.881326!10727-110A7;0.489953!10775-110G1;0.0260538!10412-106B7;0.367673!12231-129F8;0.315561!12232-129F9;0.194743!12233-129G1;0.443581!12234-129G2;0.398108!10414-106B9;0.125369!10170-103B8;0.154205!10183-103D3;0.00601761!10150-102I6;0.0071539!10174-103C3;0.0186004!10155-103A2;0.0358099!10038-101F2;0.0280515!10838-111E1;0.0518955!10759-110E3;0.349213!10514-107E1;0.966204!10465-106H6;0.58556!10691-109F7;0.911999!10843-111E6;0.735474!10844-111E7;0.528187!11747-123G1;0.806515!11748-123G2;0.488346!11749-123G3;0.347062!11750-123G4;0.692345!11751-123G5;0.735145!11840-124H4;0.693647!11752-123G6;0.874643!11753-123G7;0.187723!11754-123G8;0.821559!11755-123G9;0.294712!11756-123H1;0.0932629!11833-124G6;0.0816947!11760-123H5;0.0823819!11836-124G9;0.604214!11758-123H3;0.856873!11835-124G8;0.442339!11762-123H7;0.354857!11838-124H2;0.677767!11757-123H2;0.804666!11759-123H4;0.146687!11761-123H6;0.201!11842-124H6;0.958387!11837-124H1;0.3982!10568-108B1;0.213754!13230-141I8;0.506471!13231-141I9;0.128233!10696-109G3;0.0797743!10493-107B7;0.554859!10494-107B8;0.0597226!10850-111F4;0.261065!10851-111F5;0.674642!10852-111F6;0.823561!10853-111F7;0.818092!10854-111F8;0.366246!10855-111F9;0.390419!10856-111G1;0.288185!10847-111F1;0.242402!10846-111E9;0.159294!10848-111F2;0.641903!10845-111E8;0.252246!10857-111G2;0.259048!10858-111G3;0.177081!10156-103A3;0.542614!11901-125F2;0.0295069!11902-125F3;0.21684!11903-125F4;0.0701058!10689-109F5;0.0352655!10648-109A9;0.847969!10784-110H1;0.606378!10744-110C6;0.0209302!10772-110F7;0.270608!10474-106I6;0.285047!10600-108E6;0.00766025!10684-109E9;0.749657!12226-129F3;0.111741!12227-129F4;0.246001!10508-107D4;0.256791!10539-107G8;0.983561!10607-108F4;0.235815!10555-107I6;0.62341!10774-110F9;0.535833!10637-108I7;0.0484192!10663-109C6;0.53086!10728-110A8;0.824033!10729-110A9;0.0922945!10430-106D7;0.245583!10730-110B1;0.283346!10813-111B3;0.904735!10812-111B2;0.573021!10037-101F1;0.653907!10172-103C1;0.0141792!10163-103B1;0.0097076!10076-102A4;0.0445354!10073-102A1;0.0294318!10036-101E9;0.0470281!10195-103E6;0.0136475!10277-104E7;0.0169725!10434-106E2;0.476353!10550-107I1;0.164546!10545-107H5;0.023668!10544-107H4;0.594019!10704-109H2;0.528176!10510-107D6;0.0718022!10558-107I9;0.321933!10020-101D2;0.976725!10732-110B3;0.184292!10049-101G4;0.679196!10698-109G5;0.676023!10437-106E5;0.45057!10417-106C3;0.676825!10035-101E8;0.0645291!10171-103B9;0.00702825!10157-103A4;0.00926174!10034-101E7;0.0198526!10072-101I9;0.0118943!10199-103F1;0.0601824!10200-103F2;0.771017!10697-109G4;0.186826!10723-110A3;0.558141!10179-103C8;0.99657!10160-103A7;0.0127253!10180-103C9;0.00335306!10162-103A9;9.99393e-05!10021-101D3;0.000481654!10840-111E3;0.313873!10706-109H4;0.0911542!10033-101E6;0.431773!10032-101E5;0.0128397!10490-107B4;0.0111652!10439-106E7;0.0115566!10022-101D4;0.00801703!10176-103C5;0.171215!10469-106I1;0.01066!10067-101I4;0.0487588!10411-106B6;0.548952!10471-106I3;0.386834!10030-101E3;0.0112276!10475-106I7;0.0681653!10787-110H4;0.783835!10477-106I9;0.536475!10695-109G2;0.811931!11771-123I7;0.833632!11772-123I8;0.674878!11773-123I9;0.991128!10093-102C3;0.277184!10442-106F1;0.207501!10442-106F1;0.352486!10201-103F3;0.585169!10639-108I9;0.858056!11843-124H7;0.0286911!11841-124H5;0.0721341!10693-109F9;0.77543!10436-106E4;0.00416451!10483-107A6;0.0918918!10282-104F3;0.0617298!10023-101D5;0.437631!10066-101I3;0.386241!10065-101I2;0.290788!10800-110I8;0.251982!10610-108F7;0.218613!10841-111E4;0.58072!10541-107H1;0.395469!10842-111E5;0.146841!10562-108A4;0.649506!10024-101D6;0.512289!10064-101I1;0.979528!10609-108F6;0.385294!10048-101G3;0.93223!10781-110G7;0.17143!10181-103D1;0.686643!10159-103A6;0.135244!10056-101H2;0.151741!10737-110B8;0.120945!10025-101D7;0.116191!10044-101F8;0.769715!10424-106D1;0.431631!10463-106H4;0.315895!10616-108G4;0.185133!10486-107A9;0.110377!10062-101H8;0.40153!10202-103F4;0.583649!10158-103A5;0.57755!10441-106E9;0.201146!10031-101E4;0.794615!10063-101H9;0.0197605!10063-101H9;0.05169!11763-123H8;0.149687!11765-123I1;0.140405!11768-123I4;0.247941!10807-111A6;0.262653!10790-110H7;0.963157!10798-110I6;0.513984!10786-110H3;0.258439!10591-108D6;0.333141!10593-108D8;0.980804!10590-108D5;0.78948!10026-101D8;0.437455!10096-102C6;0.625423!10168-103B6;0.948231!10154-103A1;0.0641926!10209-103G2;0.0757299!10061-101H7;0.159419!10027-101D9;0.143434!10043-101F7;0.802056!10783-110G9;0.468095!10028-101E1;0.581346!10060-101H6;0.0565271!10203-103F5;0.18353!10059-101H5;0.193732!10047-101G2;0.140321!10029-101E2;0.200479!10058-101H4;0.0399!10418-106C4;0.0802853!10492-107B6;0.324835!10694-109G1;0.200451!10797-110I5;0.95633!10057-101H3;0.00961659!10100-102D1;0.099388!10055-101H1;0.150852!10204-103F6;0.139576!10191-103E2;0.209557!10563-108A5;0.381397
|name=CNhs10846_bu_f2
|name=CNhs10846_bu_f2
|tomtom_result=YJL103C#MA0427.1;1;0.00581198;2.7665;1;10;ATTCTGAAAA;AGCTCCGGAGA;+!znf143#MA0088.1;7;0.00603635;2.8733;1;10;ATTCTGAAAA;GCAAGGCATGATGGGAAATC;-!YER184C#MA0424.1;-1;0.00807333;3.8429;1;8;ATTCTGAAAA;TTCCGGAG;-!Hand1::Tcfe2a#MA0092.1;0;0.0086441;4.11459;1;10;ATTCTGAAAA;GGTCTGGCAT;+!CEP3#MA0282.1;-1;0.0103111;4.90806;1;8;ATTCTGAAAA;CTCGGAAA;+
}}
}}

Latest revision as of 12:39, 7 September 2012

Full Name: CNhs10846_bu_f2

Motif matrix
POACGT
1165.6975356924513118.7730079962816296.2704443773178448.54849093969905
261.3421750632488383.6468396924463340.776186642073725243.5242776079808
34.73104193681514321.8479888710259130.77363465324504271.9368135446636
411.033729098698256302.049248041176218.16722838332374298.03927348255164
50.52761822112541190.130124196209758320.13012419620975832428.5016123922048
68.7303264343064521.148655549295514415.661842450575533.7486545715722315
7245.886162990448725.13032129282879173.777423434183624.4955712882883745
8288.7774465398960624.93766031786598399.7844149151757715.78995723281189
9233.1472518210002840.721472317648133.892339553695621.528415313405816
10180.0268307060473890.3265056468788787.8603689033033571.07577374952024

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YJL103C#MA0427.110.005811982.7665110ATTCTGAAAAAGCTCCGGAGA+
znf143#MA0088.170.006036352.8733110ATTCTGAAAAGCAAGGCATGATGGGAAATC-
YER184C#MA0424.1-10.008073333.842918ATTCTGAAAATTCCGGAG-
Hand1::Tcfe2a#MA0092.100.00864414.11459110ATTCTGAAAAGGTCTGGCAT+
CEP3#MA0282.1-10.01031114.9080618ATTCTGAAAACTCGGAAA+
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