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MacroAPE 1083:CNhs13505 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;617.4880479033593;528.3869321970748;169.2678598095209;481.5311037997095!2;227.22302177003377;1280.3011861703362;69.14269657081955;220.007039...")
 
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.297614!12182-129A4;0.3757!12183-129A5;0.411049!12184-129A6;0.494915!10809-111A8;0.564881!10597-108E3;0.0259705!10717-109I6;0.038827!10455-106G5;0.13812!10534-107G3;0.0186178!10429-106D6;0.0100543!10464-106H5;0.0210445!10827-111C8;0.00115761!10789-110H6;0.0837265!10828-111C9;0.028188!10788-110H5;0.182187!10792-110H9;0.0514957!10765-110E9;0.144608!10829-111D1;0.00722018!10830-111D2;0.040812!10831-111D3;0.01328!10832-111D4;0.00215765!10833-111D5;0.00616872!10764-110E8;0.0109611!10770-110F5;0.0247523!10399-106A3;0.0255451!10400-106A4;0.00350598!10405-106A9;0.0057098!10834-111D6;0.00421234!10835-111D7;0.0165157!10836-111D8;0.0157902!10837-111D9;0.0092283!10699-109G6;0.0814637!10802-111A1;0.0348687!10796-110I4;0.000547665!10010-101C1;0.128079!10810-111A9;0.0561028!10421-106C7;0.026417!10708-109H6;0.00372302!12235-129G3;0.00226807!12236-129G4;0.221407!12237-129G5;0.139071!10167-103B5;0.156719!10151-102I7;0.446065!10428-106D5;0.48214!10795-110I3;0.335204!10805-111A4;0.0139023!10052-101G7;0.0525107!10189-103D9;0.0426104!10589-108D4;0.116462!10425-106D2;0.362083!10427-106D4;0.0286641!10702-109G9;0.0374701!10432-106D9;0.172155!10496-107C1;0.237311!10718-109I7;0.238638!10011-101C2;0.112959!10053-101G8;0.0926198!10686-109F2;0.414979!10084-102B3;0.43748!10012-101C3;0.412544!10085-102B4;0.398852!10482-107A5;0.712763!10419-106C5;0.0128303!10080-102A8;0.0317437!10760-110E4;0.180835!10709-109H7;0.0479004!10710-109H8;0.13204!10703-109H1;0.175951!10719-109I8;0.0713109!10642-109A3;0.0764028!10177-103C6;0.0078642!10164-103B2;0.430381!10173-103C2;0.48034!10166-103B4;0.79219!10083-102B2;0.506875!10188-103D8;0.409072!10552-107I3;0.378475!10553-107I4;0.0322218!10013-101C4;0.0339887!10536-107G5;0.0658862!10618-108G6;0.0425161!10423-106C9;0.227859!10785-110H2;0.0489624!12238-129G6;0.148813!12239-129G7;0.178573!12240-129G8;0.45374!10416-106C2;0.102575!10801-110I9;0.00166852!10766-110F1;0.00751208!10824-111C5;0.0211182!10825-111C6;0.0468613!10826-111C7;0.0477888!10454-106G4;0.0421784!10409-106B4;0.032536!10638-108I8;0.00482024!10636-108I6;0.00468213!10513-107D9;0.0376683!10420-106C6;0.092304!10082-102B1;0.00654283!10014-101C5;0.153856!10070-101I7;0.11349!10452-106G2;0.0329992!10453-106G3;0.00105498!10449-106F8;0.000143311!10042-101F6;0.000238447!10069-101I6;0.427748!10193-103E4;0.00196244!10631-108I1;0.609162!10438-106E6;0.013479!10488-107B2;0.1472!10196-103E7;0.0873382!10071-101I8;0.326292!10071-101I8;0.00823698!10041-101F5;0.620979!10451-106G1;0.0782239!10450-106F9;0.000179653!10604-108F1;0.000587041!10605-108F2;2.60602e-05!10606-108F3;0.00376062!10603-108E9;0.0023381!10497-107C2;0.00555066!10448-106F7;0.229403!10643-109A4;4.69368e-05!10426-106D3;0.0542097!10431-106D8;0.393208!10197-103E8;0.0196752!10443-106F2;0.0152428!10815-111B5;0.168233!10816-111B6;0.00570135!10817-111B7;0.00287275!10015-101C6;0.00584185!10410-106B5;0.00720949!10054-101G9;0.340742!10758-110E2;0.00148194!10711-109H9;0.0013734!10040-101F4;0.0691012!10470-106I2;0.544404!10415-106C1;0.131949!10198-103E9;0.311375!10614-108G2;0.0459567!10612-108F9;0.341416!10549-107H9;0.153866!10615-108G3;0.0186256!10487-107B1;0.085972!10433-106E1;0.00753646!10688-109F4;0.0543069!10444-106F3;0.254282!10444-106F3;0.0376028!10485-107A8;0.0764249!10413-106B8;0.00527253!10175-103C4;0.873241!10161-103A8;0.664407!12131-128D7;0.615228!10624-108H3;0.037901!10712-109I1;0.85429!10205-103F7;0.0358003!10206-103F8;0.00516519!10207-103F9;0.0142507!10050-101G5;0.0530277!10051-101G6;0.000440266!10016-101C7;0.00518368!10046-101G1;0.0224631!10778-110G4;0.0104997!10633-108I3;0.0845123!10818-111B8;0.244643!10819-111B9;0.472736!10820-111C1;0.489916!10484-107A7;0.486771!10808-111A7;0.046958!10169-103B7;0.0515589!10153-102I9;0.482028!13425-144D5;0.411204!13433-144E4;0.258632!13437-144E8;0.230905!11904-125F5;0.352224!11905-125F6;0.0251126!10039-101F3;0.00758294!10791-110H8;0.555605!10017-101C8;0.116491!10045-101F9;0.126481!10509-107D5;0.0242284!10839-111E2;0.261279!10692-109F8;0.0318797!10079-102A7;0.0348347!10078-102A6;0.0112322!10721-110A1;0.0142685!10569-108B2;0.0190734!10570-108B3;0.151652!10571-108B4;0.0397795!10647-109A8;0.0321561!10752-110D5;0.0103751!10782-110G8;0.00648805!10726-110A6;0.917809!10018-101C9;0.160607!10086-102B5;0.485832!10182-103D2;7.37656e-06!10165-103B3;0.480494!10499-107C4;0.474201!10408-106B3;0.109845!10019-101D1;0.371161!10068-101I5;0.0139435!10075-102A3;0.00552878!10077-102A5;0.0721266!10727-110A7;0.527471!10775-110G1;0.0252746!10412-106B7;0.0277332!12231-129F8;0.86166!12232-129F9;0.445262!12233-129G1;0.680099!12234-129G2;0.419583!10414-106B9;0.614812!10170-103B8;0.137175!10183-103D3;0.454796!10150-102I6;0.495164!10174-103C3;0.526694!10155-103A2;0.171624!10038-101F2;0.198119!10838-111E1;0.339611!10759-110E3;0.0432404!10514-107E1;0.00274138!10465-106H6;0.000308361!10691-109F7;0.0163982!10843-111E6;0.357909!10844-111E7;0.0289704!11747-123G1;0.652122!11748-123G2;0.00322394!11749-123G3;0.000579423!11750-123G4;0.0218747!11751-123G5;0.122889!11840-124H4;0.00784425!11752-123G6;0.0174594!11753-123G7;0.0297612!11754-123G8;0.0317279!11755-123G9;0.0129937!11756-123H1;0.375172!11833-124G6;0.215988!11760-123H5;0.0579057!11836-124G9;0.0842164!11758-123H3;0.236785!11835-124G8;0.111833!11762-123H7;0.0947865!11838-124H2;0.00989812!11757-123H2;0.0755684!11759-123H4;0.238148!11761-123H6;0.0910565!11842-124H6;0.013044!11837-124H1;0.0124911!10568-108B1;0.129728!13230-141I8;0.330224!13231-141I9;0.00105562!10696-109G3;0.000959408!10493-107B7;0.709285!10494-107B8;0.142819!10850-111F4;0.477495!10851-111F5;0.147533!10852-111F6;0.656435!10853-111F7;0.780842!10854-111F8;0.509403!10855-111F9;0.0735796!10856-111G1;0.957127!10847-111F1;0.308636!10846-111E9;0.0478502!10848-111F2;0.147046!10845-111E8;0.164122!10857-111G2;0.00145491!10858-111G3;0.00317699!10156-103A3;0.415754!11901-125F2;0.550872!11902-125F3;0.039764!11903-125F4;0.0140859!10689-109F5;0.0366885!10648-109A9;0.000929629!10784-110H1;0.0281846!10744-110C6;0.292238!10772-110F7;0.000452573!10474-106I6;0.00166055!10600-108E6;0.147309!10684-109E9;0.0936512!12226-129F3;0.225761!12227-129F4;0.684453!10508-107D4;0.132564!10539-107G8;0.128259!10607-108F4;0.261865!10555-107I6;0.235398!10774-110F9;0.468218!10637-108I7;0.113378!10663-109C6;0.666172!10728-110A8;0.602406!10729-110A9;0.149204!10430-106D7;0.0608017!10730-110B1;0.00312609!10813-111B3;0.177614!10812-111B2;0.036996!10037-101F1;0.548405!10172-103C1;0.505832!10163-103B1;0.488167!10076-102A4;0.625649!10073-102A1;0.565967!10036-101E9;0.698171!10195-103E6;0.554489!10277-104E7;0.474272!10434-106E2;0.578601!10550-107I1;0.053115!10545-107H5;0.00801359!10544-107H4;0.590995!10704-109H2;0.0713922!10510-107D6;0.87102!10558-107I9;0.00247244!10020-101D2;0.242796!10732-110B3;0.0674525!10049-101G4;0.589411!10698-109G5;0.0116057!10437-106E5;0.0535093!10417-106C3;0.152767!10035-101E8;0.509578!10171-103B9;0.599604!10157-103A4;0.724054!10034-101E7;0.524546!10072-101I9;0.573687!10199-103F1;0.773772!10200-103F2;0.00540188!10697-109G4;0.00224744!10723-110A3;0.910918!10179-103C8;0.36758!10160-103A7;0.361255!10180-103C9;0.381388!10162-103A9;0.160615!10021-101D3;0.180537!10840-111E3;0.0261681!10706-109H4;0.0233983!10033-101E6;0.243597!10032-101E5;0.565715!10490-107B4;0.53614!10439-106E7;0.0993299!10022-101D4;0.0798487!10176-103C5;0.0755582!10469-106I1;0.607576!10067-101I4;0.196378!10411-106B6;0.133699!10471-106I3;0.0165839!10030-101E3;0.104187!10475-106I7;0.0928074!10787-110H4;0.00519676!10477-106I9;0.0375682!10695-109G2;0.959764!11771-123I7;0.204406!11772-123I8;0.385605!11773-123I9;0.475296!10093-102C3;0.361291!10442-106F1;0.00421011!10442-106F1;0.153697!10201-103F3;0.147786!10639-108I9;0.192546!11843-124H7;0.153385!11841-124H5;0.0750439!10693-109F9;0.0507566!10436-106E4;0.0435856!10483-107A6;0.171401!10282-104F3;0.11551!10023-101D5;0.00137022!10066-101I3;0.00526082!10065-101I2;0.00178654!10800-110I8;5.59893e-05!10610-108F7;0.0749512!10841-111E4;0.924822!10541-107H1;0.0775532!10842-111E5;0.0173057!10562-108A4;0.239707!10024-101D6;0.199707!10064-101I1;0.215369!10609-108F6;0.00664487!10048-101G3;0.295821!10781-110G7;0.405732!10181-103D1;0.320345!10159-103A6;0.317684!10056-101H2;0.452784!10737-110B8;0.0774475!10025-101D7;0.12047!10044-101F8;0.671842!10424-106D1;0.0944111!10463-106H4;0.00864518!10616-108G4;0.14785!10486-107A9;0.0337993!10062-101H8;0.0670061!10202-103F4;0.0137482!10158-103A5;0.00595184!10441-106E9;0.532215!10031-101E4;0.00857172!10063-101H9;0.471143!10063-101H9;0.608305!11763-123H8;0.00557034!11765-123I1;0.000645919!11768-123I4;0.000376323!10807-111A6;0.000169189!10790-110H7;0.0130537!10798-110I6;0.0260462!10786-110H3;0.0533137!10591-108D6;0.0335068!10593-108D8;0.078855!10590-108D5;0.00928068!10026-101D8;0.102266!10096-102C6;0.0636918!10168-103B6;0.802159!10154-103A1;0.562415!10209-103G2;0.496323!10061-101H7;0.000294491!10027-101D9;9.62429e-05!10043-101F7;0.287255!10783-110G9;0.279708!10028-101E1;0.540678!10060-101H6;0.0338285!10203-103F5;0.000568135!10059-101H5;0.00125309!10047-101G2;0.000249964!10029-101E2;0.0276962!10058-101H4;0.000718967!10418-106C4;0.0001243!10492-107B6;0.135725!10694-109G1;0.0193895!10797-110I5;0.0980463!10057-101H3;0.0277012!10100-102D1;8.32945e-05!10055-101H1;0.200111!10204-103F6;0.0156346!10191-103E2;0.453305!10563-108A5;0.0125707
|name=CNhs13505_bu_f1
|name=CNhs13505_bu_f1
|tomtom_result=Hand1::Tcfe2a#MA0092.1;-1;0.00248125;1.18108;1;10;ACCATCAGATCT;ATGCCAGACC;-!HAP4#MA0315.1;1;0.00255052;1.21405;1;12;ACCATCAGATCT;ACCAATCAGAGGCGA;+!HAP5#MA0316.1;1;0.00347587;1.65451;1;12;ACCATCAGATCT;ACCAATCAGATCCCA;-!ESR1#MA0112.2;-1;0.00594075;2.8278;1;11;ACCATCAGATCT;GGCCCAGGTCACCCTGACCT;+!YJL103C#MA0427.1;0;0.00876751;4.17333;1;11;ACCATCAGATCT;AGCTCCGGAGA;+!SOK2#MA0385.1;0;0.0092789;4.41676;1;11;ACCATCAGATCT;ACCTGCAGGCA;+!Lag1#MA0193.1;-1;0.0122752;5.84301;1;7;ACCATCAGATCT;CTACCAA;+!Mafb#MA0117.1;-1;0.0154084;7.3344;1;8;ACCATCAGATCT;GCGTCAGC;-!GAT3#MA0301.1;-3;0.0177023;8.42629;1;9;ACCATCAGATCT;TGTAGATCT;-!NFYA#MA0060.1;5;0.02053;9.7723;1;11;ACCATCAGATCT;CTCAGCCAATCAGCGC;+
}}
}}

Latest revision as of 12:44, 7 September 2012

Full Name: CNhs13505_bu_f1

Motif matrix
POACGT
1617.4880479033593528.3869321970748169.2678598095209481.5311037997095
2227.223021770033771280.301186170336269.14269657081955220.00703919847635
3335.57144213246784997.901626849765850.17127856009572413.0295961673358
4800.907648725824513.2622356023585173.4928147986676309.0112445828134
533.062751264380395865.356324275981829.991600131838673868.2632680374624
611.2924410452272481729.30123444846625.63293211132841530.44733610464624
71781.74071987642543.5122602027145557.9161342348731633.504829395655516
88.2829670992161958.0223439299727671755.793014840674724.57561783980417
9812.496505083465330.67590395716593620.282436913230833.21909775580298
10265.84327101882013515.5964246009967212.39412447505595802.8401236147918
11253.782365026571681132.4062008966578204.76929029083593205.71608749560008
12576.5331276628876350.9609615564056115.45080581041947753.7290486799513

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Hand1::Tcfe2a#MA0092.1-10.002481251.18108110ACCATCAGATCTATGCCAGACC-
HAP4#MA0315.110.002550521.21405112ACCATCAGATCTACCAATCAGAGGCGA+
HAP5#MA0316.110.003475871.65451112ACCATCAGATCTACCAATCAGATCCCA-
ESR1#MA0112.2-10.005940752.8278111ACCATCAGATCTGGCCCAGGTCACCCTGACCT+
YJL103C#MA0427.100.008767514.17333111ACCATCAGATCTAGCTCCGGAGA+
SOK2#MA0385.100.00927894.41676111ACCATCAGATCTACCTGCAGGCA+
Lag1#MA0193.1-10.01227525.8430117ACCATCAGATCTCTACCAA+
Mafb#MA0117.1-10.01540847.334418ACCATCAGATCTGCGTCAGC-
GAT3#MA0301.1-30.01770238.4262919ACCATCAGATCTTGTAGATCT-
NFYA#MA0060.150.020539.7723111ACCATCAGATCTCTCAGCCAATCAGCGC+
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