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MacroAPE 1083:CNhs11747 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;507.4639703117042;165.6843738334065;412.64241158412574;113.27709280721258!2;401.05286816098146;257.76955779913453;497.6989364205336;42.54648...")
 
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3-129A5;0.0386158!12184-129A6;0.0280386!10809-111A8;0.0349708!10597-108E3;0.711669!10717-109I6;0.185353!10455-106G5;0.73361!10534-107G3;0.0194827!10429-106D6;0.210106!10464-106H5;0.162913!10827-111C8;0.0271846!10789-110H6;0.0316713!10828-111C9;0.00893516!10788-110H5;0.0135064!10792-110H9;0.0356438!10765-110E9;0.0366472!10829-111D1;0.0229208!10830-111D2;0.073589!10831-111D3;0.0377835!10832-111D4;0.00965178!10833-111D5;0.0744014!10764-110E8;0.0964051!10770-110F5;0.0360024!10399-106A3;0.0589337!10400-106A4;0.0590311!10405-106A9;0.0840673!10834-111D6;0.0767782!10835-111D7;0.0386918!10836-111D8;0.092742!10837-111D9;0.518747!10699-109G6;0.061616!10802-111A1;0.0768231!10796-110I4;0.114625!10010-101C1;0.496528!10810-111A9;0.186518!10421-106C7;0.69592!10708-109H6;0.03856!12235-129G3;0.722112!12236-129G4;0.323496!12237-129G5;0.872998!10167-103B5;0.579314!10151-102I7;0.00129489!10428-106D5;0.00142361!10795-110I3;0.683345!10805-111A4;0.0426537!10052-101G7;0.39228!10189-103D9;0.0408506!10589-108D4;0.680338!10425-106D2;0.401888!10427-106D4;0.0256929!10702-109G9;0.0114048!10432-106D9;0.918363!10496-107C1;0.0856507!10718-109I7;0.240696!10011-101C2;0.0847464!10053-101G8;0.0172466!10686-109F2;0.0339903!10084-102B3;0.564043!10012-101C3;0.00317034!10085-102B4;0.00113395!10482-107A5;0.00200391!10419-106C5;0.56169!10080-102A8;0.757278!10760-110E4;0.122872!10709-109H7;0.591773!10710-109H8;0.311376!10703-109H1;0.0998056!10719-109I8;0.0412106!10642-109A3;0.195778!10177-103C6;0.030402!10164-103B2;0.00119143!10173-103C2;0.00146391!10166-103B4;0.00246871!10083-102B2;0.00140921!10188-103D8;0.00331189!10552-107I3;0.00128389!10553-107I4;0.314944!10013-101C4;0.0519155!10536-107G5;0.0490388!10618-108G6;0.875776!10423-106C9;0.358651!10785-110H2;0.0302725!12238-129G6;0.382562!12239-129G7;0.219713!12240-129G8;0.462499!10416-106C2;0.102745!10801-110I9;0.0206609!10766-110F1;0.0306473!10824-111C5;0.057243!10825-111C6;0.264129!10826-111C7;0.295833!10454-106G4;0.264404!10409-106B4;0.396209!10638-108I8;0.0536784!10636-108I6;0.176434!10513-107D9;0.15898!10420-106C6;0.2472!10082-102B1;0.391533!10014-101C5;0.179436!10070-101I7;0.213588!10452-106G2;0.266535!10453-106G3;0.180269!10449-106F8;0.0324651!10042-101F6;0.0404607!10069-101I6;0.000685888!10193-103E4;0.0938365!10631-108I1;0.00161231!10438-106E6;0.0437237!10488-107B2;0.327754!10196-103E7;0.506575!10071-101I8;0.0114607!10071-101I8;0.161421!10041-101F5;0.00297099!10451-106G1;0.0474911!10450-106F9;0.657799!10604-108F1;0.990192!10605-108F2;0.905685!10606-108F3;0.51172!10603-108E9;0.778976!10497-107C2;0.871904!10448-106F7;0.378815!10643-109A4;0.618601!10426-106D3;0.771219!10431-106D8;0.476484!10197-103E8;0.481349!10443-106F2;0.112339!10815-111B5;0.311966!10816-111B6;0.525761!10817-111B7;0.820346!10015-101C6;0.599604!10410-106B5;0.0835654!10054-101G9;0.690051!10758-110E2;0.0146771!10711-109H9;0.0625127!10040-101F4;0.24733!10470-106I2;0.00130427!10415-106C1;0.982861!10198-103E9;0.590864!10614-108G2;0.130041!10612-108F9;0.942201!10549-107H9;0.296435!10615-108G3;0.684317!10487-107B1;0.357027!10433-106E1;0.114538!10688-109F4;0.87957!10444-106F3;0.360093!10444-106F3;0.375035!10485-107A8;0.350897!10413-106B8;0.996546!10175-103C4;0.645783!10161-103A8;0.00156572!12131-128D7;0.00119451!10624-108H3;0.90893!10712-109I1;0.106154!10205-103F7;0.00943386!10206-103F8;0.00210602!10207-103F9;0.000704759!10050-101G5;0.0275058!10051-101G6;0.142002!10016-101C7;0.00729095!10046-101G1;0.0148551!10778-110G4;0.006132!10633-108I3;0.649657!10818-111B8;0.760978!10819-111B9;0.338538!10820-111C1;0.35661!10484-107A7;0.427428!10808-111A7;0.076356!10169-103B7;0.0312499!10153-102I9;0.00272674!13425-144D5;0.0012687!13433-144E4;0.267803!13437-144E8;0.297267!11904-125F5;0.446338!11905-125F6;0.11347!10039-101F3;0.295633!10791-110H8;0.00127905!10017-101C8;0.834933!10045-101F9;0.35691!10509-107D5;0.0324318!10839-111E2;0.180332!10692-109F8;0.489795!10079-102A7;0.579044!10078-102A6;0.0772147!10721-110A1;0.18858!10569-108B2;0.357415!10570-108B3;0.539147!10571-108B4;0.332392!10647-109A8;0.874396!10752-110D5;0.264437!10782-110G8;0.0537045!10726-110A6;0.0991066!10018-101C9;0.393694!10086-102B5;0.313363!10182-103D2;0.342103!10165-103B3;0.0022122!10499-107C4;0.00126488!10408-106B3;0.352207!10019-101D1;0.992068!10068-101I5;0.591295!10075-102A3;0.111617!10077-102A5;0.662009!10727-110A7;0.0121835!10775-110G1;0.014259!10412-106B7;0.00573342!12231-129F8;0.363073!12232-129F9;0.00164514!12233-129G1;0.00667114!12234-129G2;0.0176257!10414-106B9;0.0425884!10170-103B8;0.864414!10183-103D3;0.00107493!10150-102I6;0.0012433!10174-103C3;0.00102943!10155-103A2;0.000889273!10038-101F2;0.000692601!10838-111E1;0.00156901!10759-110E3;0.201103!10514-107E1;0.225875!10465-106H6;0.0386136!10691-109F7;0.909988!10843-111E6;0.0320345!10844-111E7;0.0572721!11747-123G1;0.0172268!11748-123G2;0.0225455!11749-123G3;0.570299!11750-123G4;0.0176944!11751-123G5;0.294118!11840-124H4;0.187921!11752-123G6;0.350728!11753-123G7;0.0469114!11754-123G8;0.540307!11755-123G9;0.101966!11756-123H1;0.0575466!11833-124G6;0.297969!11760-123H5;0.126112!11836-124G9;0.811822!11758-123H3;0.0793061!11835-124G8;0.658009!11762-123H7;0.678025!11838-124H2;0.601542!11757-123H2;0.250232!11759-123H4;0.63219!11761-123H6;0.468969!11842-124H6;0.816846!11837-124H1;0.986771!10568-108B1;0.629964!13230-141I8;0.478505!13231-141I9;0.52292!10696-109G3;0.88419!10493-107B7;0.178668!10494-107B8;0.930685!10850-111F4;0.995596!10851-111F5;0.631843!10852-111F6;0.502157!10853-111F7;0.829325!10854-111F8;0.193832!10855-111F9;0.693637!10856-111G1;0.604953!10847-111F1;0.939987!10846-111E9;0.583448!10848-111F2;0.608092!10845-111E8;0.15429!10857-111G2;0.593239!10858-111G3;0.215568!10156-103A3;0.0136544!11901-125F2;0.00105017!11902-125F3;0.212945!11903-125F4;0.315625!10689-109F5;0.208931!10648-109A9;0.651045!10784-110H1;0.242696!10744-110C6;0.989298!10772-110F7;0.0308237!10474-106I6;0.0438984!10600-108E6;0.0874194!10684-109E9;0.90612!12226-129F3;0.556316!12227-129F4;0.598181!10508-107D4;0.000340277!10539-107G8;0.0328404!10607-108F4;0.00614047!10555-107I6;0.332842!10774-110F9;0.0100524!10637-108I7;0.61483!10663-109C6;0.263194!10728-110A8;0.365848!10729-110A9;0.246347!10430-106D7;0.82901!10730-110B1;0.173505!10813-111B3;0.0476033!10812-111B2;0.0295471!10037-101F1;0.346637!10172-103C1;0.00141208!10163-103B1;0.000802186!10076-102A4;0.00117944!10073-102A1;0.00159558!10036-101E9;0.00418345!10195-103E6;0.00139484!10277-104E7;0.00134619!10434-106E2;0.000864604!10550-107I1;0.999119!10545-107H5;0.974192!10544-107H4;0.587586!10704-109H2;0.733492!10510-107D6;0.961657!10558-107I9;0.587932!10020-101D2;0.580429!10732-110B3;0.0269425!10049-101G4;0.62078!10698-109G5;0.830361!10437-106E5;0.200388!10417-106C3;0.43872!10035-101E8;0.176895!10171-103B9;0.00132628!10157-103A4;0.00143754!10034-101E7;0.00105464!10072-101I9;0.00135824!10199-103F1;0.00381712!10200-103F2;0.852122!10697-109G4;0.0354586!10723-110A3;0.313808!10179-103C8;0.975602!10160-103A7;0.00021115!10180-103C9;0.000179458!10162-103A9;0.000468149!10021-101D3;0.00072338!10840-111E3;0.904958!10706-109H4;0.0195128!10033-101E6;0.450462!10032-101E5;0.00137794!10490-107B4;0.00124954!10439-106E7;0.314968!10022-101D4;0.824917!10176-103C5;0.0257662!10469-106I1;0.00112351!10067-101I4;0.889592!10411-106B6;0.0320719!10471-106I3;0.265912!10030-101E3;0.279701!10475-106I7;0.00481146!10787-110H4;0.106265!10477-106I9;0.903171!10695-109G2;0.137207!11771-123I7;0.221736!11772-123I8;0.0932965!11773-123I9;0.00153986!10093-102C3;0.00443665!10442-106F1;0.693728!10442-106F1;0.302352!10201-103F3;0.352795!10639-108I9;0.00424251!11843-124H7;0.215059!11841-124H5;0.324236!10693-109F9;0.828553!10436-106E4;0.385592!10483-107A6;0.381267!10282-104F3;0.0152636!10023-101D5;0.0190556!10066-101I3;0.0158704!10065-101I2;0.206953!10800-110I8;0.0915784!10610-108F7;0.0860139!10841-111E4;0.0519573!10541-107H1;0.543788!10842-111E5;0.858304!10562-108A4;0.0297674!10024-101D6;0.021306!10064-101I1;0.376967!10609-108F6;0.431656!10048-101G3;0.303459!10781-110G7;0.00372906!10181-103D1;0.0103649!10159-103A6;0.00164237!10056-101H2;0.000605723!10737-110B8;0.00744814!10025-101D7;0.636257!10044-101F8;0.123236!10424-106D1;0.698339!10463-106H4;0.00524188!10616-108G4;0.553256!10486-107A9;0.352028!10062-101H8;0.125789!10202-103F4;0.0490817!10158-103A5;0.368571!10441-106E9;0.000364584!10031-101E4;0.505295!10063-101H9;0.0012925!10063-101H9;0.00494551!11763-123H8;0.163904!11765-123I1;0.510754!11768-123I4;0.753327!10807-111A6;0.734667!10790-110H7;0.170444!10798-110I6;0.56221!10786-110H3;0.308605!10591-108D6;0.511882!10593-108D8;0.294966!10590-108D5;0.146382!10026-101D8;0.569995!10096-102C6;0.137007!10168-103B6;0.101568!10154-103A1;0.00180427!10209-103G2;0.00076834!10061-101H7;0.229851!10027-101D9;0.0812575!10043-101F7;0.0795005!10783-110G9;0.57509!10028-101E1;0.866244!10060-101H6;0.0595355!10203-103F5;0.0499484!10059-101H5;0.160757!10047-101G2;0.240544!10029-101E2;0.865302!10058-101H4;0.568309!10418-106C4;0.118484!10492-107B6;0.301067!10694-109G1;0.558171!10797-110I5;0.0504987!10057-101H3;0.224086!10100-102D1;0.105898!10055-101H1;0.013605!10204-103F6;0.0455099!10191-103E2;0.0138785!10563-108A5;0.391871
|name=CNhs11747_bu_f2
|name=CNhs11747_bu_f2
|tomtom_result=Trl#MA0205.1;-1;4.05574e-05;0.0193053;0.0386107;10;AGAAGGAGAGGG;GAGAGAGCAA;-!YGR067C#MA0425.1;0;0.00284842;1.35585;1;12;AGAAGGAGAGGG;TGAAAAAGTGGGGT;-!btd#MA0443.1;-2;0.0037485;1.78429;1;10;AGAAGGAGAGGG;AGGGGGCGGA;+!Klf4#MA0039.1;-2;0.00785424;3.73862;1;10;AGAAGGAGAGGG;TAAAGGAAGG;+!Pax4#MA0068.1;2;0.00929767;4.42569;1;12;AGAAGGAGAGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!SP1#MA0079.2;-3;0.00936864;4.45947;1;9;AGAAGGAGAGGG;GGGGGCGGGG;-!IXR1#MA0323.1;2;0.00969914;4.61679;1;12;AGAAGGAGAGGG;AAGCCGGAAGCGGGG;+!id1#MA0120.1;2;0.0137379;6.53922;1;10;AGAAGGAGAGGG;CGAAAAGGAAAA;-!SFL1#MA0377.1;2;0.0139244;6.62802;1;12;AGAAGGAGAGGG;TAGAGAATAGAAGAAATAAAA;+
}}
}}

Latest revision as of 12:45, 7 September 2012

Full Name: CNhs11747_bu_f2

Motif matrix
POACGT
1507.4639703117042165.6843738334065412.64241158412574113.27709280721258
2401.05286816098146257.76955779913453497.698936420533642.54648615579984
3692.7058562650107246.21700379107304190.122925040336470.02206344002936
4566.370034115090644.982905527299266462.278745259335125.43616363472478
5331.915458865400642.0268013250337926856.74888301118418.37670533483053
61.68742145019527180.01197.01276493021760.3676621560370835
71199.067848536450.00.00.0
87.8428508494659321.15066392386611941188.92366983925221.1506639238661194
9591.772149605639471.103963070374566.296250933503104129.89548492693245
10457.72234505712925146.41395168464211482.25817722156023112.67337457311814
11228.91517802637514178.28080412471365759.423771796340132.448094589020045
12422.7520082851528211.06962954994856508.899412798264856.346797903084

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.1-14.05574e-050.01930530.038610710AGAAGGAGAGGGGAGAGAGCAA-
YGR067C#MA0425.100.002848421.35585112AGAAGGAGAGGGTGAAAAAGTGGGGT-
btd#MA0443.1-20.00374851.78429110AGAAGGAGAGGGAGGGGGCGGA+
Klf4#MA0039.1-20.007854243.73862110AGAAGGAGAGGGTAAAGGAAGG+
Pax4#MA0068.120.009297674.42569112AGAAGGAGAGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
SP1#MA0079.2-30.009368644.4594719AGAAGGAGAGGGGGGGGCGGGG-
IXR1#MA0323.120.009699144.61679112AGAAGGAGAGGGAAGCCGGAAGCGGGG+
id1#MA0120.120.01373796.53922110AGAAGGAGAGGGCGAAAAGGAAAA-
SFL1#MA0377.120.01392446.62802112AGAAGGAGAGGGTAGAGAATAGAAGAAATAAAA+
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