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MacroAPE 1083:CNhs10751 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.22594080890417834;34.77885180124135;9.603932547475734;532.3556555253259!2;0.0;0.0;0.0;576.9643806829464!3;0.0;68.13935157430353;0.0;508.82...")
 
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372!10717-109I6;0.0398287!10455-106G5;0.00880791!10534-107G3;0.00636594!10429-106D6;0.215335!10464-106H5;0.128861!10827-111C8;0.0423296!10789-110H6;0.0925164!10828-111C9;0.0042769!10788-110H5;0.0442243!10792-110H9;0.0468557!10765-110E9;0.0266309!10829-111D1;0.0298532!10830-111D2;0.0425303!10831-111D3;0.0136091!10832-111D4;0.00615303!10833-111D5;0.024055!10764-110E8;0.0245967!10770-110F5;0.548536!10399-106A3;0.118997!10400-106A4;0.0978347!10405-106A9;0.140862!10834-111D6;0.104448!10835-111D7;0.0890047!10836-111D8;0.187482!10837-111D9;0.194821!10699-109G6;0.0302425!10802-111A1;0.201429!10796-110I4;0.148793!10010-101C1;0.13701!10810-111A9;0.545155!10421-106C7;0.192589!10708-109H6;0.116016!12235-129G3;0.131146!12236-129G4;0.936069!12237-129G5;0.299619!10167-103B5;0.801812!10151-102I7;0.131747!10428-106D5;0.0866876!10795-110I3;0.713403!10805-111A4;0.00515405!10052-101G7;0.0238322!10189-103D9;0.44191!10589-108D4;0.016851!10425-106D2;0.191658!10427-106D4;0.132286!10702-109G9;0.0713456!10432-106D9;0.0927098!10496-107C1;0.838132!10718-109I7;0.965401!10011-101C2;0.0466946!10053-101G8;0.491817!10686-109F2;0.0333895!10084-102B3;0.520243!10012-101C3;0.236646!10085-102B4;0.0810721!10482-107A5;0.134621!10419-106C5;0.0470852!10080-102A8;0.101099!10760-110E4;0.261688!10709-109H7;0.323831!10710-109H8;0.178931!10703-109H1;0.169785!10719-109I8;0.0609202!10642-109A3;0.726216!10177-103C6;0.361662!10164-103B2;0.0191028!10173-103C2;0.0528796!10166-103B4;0.0719838!10083-102B2;0.0118125!10188-103D8;0.0936826!10552-107I3;0.0821738!10553-107I4;0.0556539!10013-101C4;0.0151892!10536-107G5;0.198232!10618-108G6;0.214749!10423-106C9;0.968771!10785-110H2;0.932925!12238-129G6;0.709915!12239-129G7;0.143256!12240-129G8;0.830648!10416-106C2;0.00547612!10801-110I9;0.0525473!10766-110F1;0.105505!10824-111C5;0.0201542!10825-111C6;0.63255!10826-111C7;0.526836!10454-106G4;0.82001!10409-106B4;0.624213!10638-108I8;0.0346438!10636-108I6;0.586903!10513-107D9;0.292452!10420-106C6;0.228992!10082-102B1;0.270506!10014-101C5;0.69189!10070-101I7;0.982047!10452-106G2;0.959524!10453-106G3;0.419344!10449-106F8;0.283452!10042-101F6;0.310917!10069-101I6;0.0719962!10193-103E4;0.0639717!10631-108I1;0.317538!10438-106E6;0.119076!10488-107B2;0.216973!10196-103E7;0.328475!10071-101I8;0.0570293!10071-101I8;0.267748!10041-101F5;0.0778089!10451-106G1;0.963927!10450-106F9;0.126487!10604-108F1;0.0495383!10605-108F2;0.91081!10606-108F3;0.95754!10603-108E9;0.846397!10497-107C2;0.805239!10448-106F7;0.424801!10643-109A4;0.852937!10426-106D3;0.0864884!10431-106D8;0.478628!10197-103E8;0.864456!10443-106F2;0.0506737!10815-111B5;0.0973167!10816-111B6;0.0418551!10817-111B7;0.0266511!10015-101C6;0.0248553!10410-106B5;0.638274!10054-101G9;0.120916!10758-110E2;0.0476819!10711-109H9;0.17583!10040-101F4;0.490195!10470-106I2;0.101608!10415-106C1;0.0880685!10198-103E9;0.566682!10614-108G2;0.653822!10612-108F9;0.541687!10549-107H9;0.13857!10615-108G3;0.0124088!10487-107B1;0.131336!10433-106E1;0.474762!10688-109F4;0.085889!10444-106F3;0.270168!10444-106F3;0.725059!10485-107A8;0.590601!10413-106B8;0.689481!10175-103C4;0.281648!10161-103A8;0.16623!12131-128D7;0.106758!10624-108H3;0.742413!10712-109I1;0.236479!10205-103F7;0.203352!10206-103F8;0.0303794!10207-103F9;0.00508868!10050-101G5;0.261656!10051-101G6;0.00037485!10016-101C7;0.00133823!10046-101G1;0.00516756!10778-110G4;0.00193325!10633-108I3;0.607536!10818-111B8;0.00583017!10819-111B9;0.079041!10820-111C1;0.055595!10484-107A7;0.0914565!10808-111A7;0.0124452!10169-103B7;0.0152407!10153-102I9;0.17299!13425-144D5;0.0319438!13433-144E4;0.839371!13437-144E8;0.754029!11904-125F5;0.650965!11905-125F6;0.0227748!10039-101F3;0.0467297!10791-110H8;0.0717458!10017-101C8;0.143471!10045-101F9;0.200961!10509-107D5;0.0980738!10839-111E2;0.02844!10692-109F8;0.225539!10079-102A7;0.198561!10078-102A6;0.999735!10721-110A1;0.161049!10569-108B2;0.704857!10570-108B3;0.400744!10571-108B4;0.639453!10647-109A8;0.338516!10752-110D5;0.160001!10782-110G8;0.0147526!10726-110A6;0.656393!10018-101C9;0.742785!10086-102B5;0.780409!10182-103D2;0.355544!10165-103B3;0.170854!10499-107C4;0.222577!10408-106B3;0.194232!10019-101D1;0.234514!10068-101I5;0.872483!10075-102A3;0.54961!10077-102A5;0.427879!10727-110A7;0.00443901!10775-110G1;0.00795652!10412-106B7;0.0168813!12231-129F8;0.503028!12232-129F9;0.272601!12233-129G1;0.537964!12234-129G2;0.33922!10414-106B9;0.133162!10170-103B8;0.000155641!10183-103D3;0.189528!10150-102I6;0.132414!10174-103C3;0.0516504!10155-103A2;0.382326!10038-101F2;0.123615!10838-111E1;0.102196!10759-110E3;0.148013!10514-107E1;0.106191!10465-106H6;0.0291003!10691-109F7;0.194419!10843-111E6;0.920566!10844-111E7;0.172355!11747-123G1;0.0975748!11748-123G2;0.15286!11749-123G3;0.246176!11750-123G4;0.225547!11751-123G5;0.199484!11840-124H4;0.175887!11752-123G6;0.080707!11753-123G7;0.388284!11754-123G8;0.130068!11755-123G9;0.675953!11756-123H1;0.941391!11833-124G6;0.941955!11760-123H5;0.890992!11836-124G9;0.803436!11758-123H3;0.446063!11835-124G8;0.363073!11762-123H7;0.209557!11838-124H2;0.376972!11757-123H2;0.470559!11759-123H4;0.780209!11761-123H6;0.563234!11842-124H6;0.505599!11837-124H1;0.10755!10568-108B1;0.276585!13230-141I8;0.781717!13231-141I9;0.252984!10696-109G3;0.376553!10493-107B7;0.135976!10494-107B8;0.46456!10850-111F4;0.845474!10851-111F5;0.310318!10852-111F6;0.366422!10853-111F7;0.728729!10854-111F8;0.395311!10855-111F9;0.547891!10856-111G1;0.844541!10847-111F1;0.138636!10846-111E9;0.167469!10848-111F2;0.826157!10845-111E8;0.708508!10857-111G2;0.623691!10858-111G3;0.994511!10156-103A3;0.848497!11901-125F2;0.0438232!11902-125F3;0.124912!11903-125F4;0.142786!10689-109F5;0.049529!10648-109A9;0.433161!10784-110H1;0.562814!10744-110C6;0.344159!10772-110F7;0.067739!10474-106I6;0.0911942!10600-108E6;0.0730216!10684-109E9;0.0424141!12226-129F3;0.00511292!12227-129F4;0.875175!10508-107D4;0.13645!10539-107G8;0.826256!10607-108F4;0.123748!10555-107I6;0.42756!10774-110F9;0.45542!10637-108I7;0.928932!10663-109C6;0.378846!10728-110A8;0.557888!10729-110A9;0.998486!10430-106D7;0.151431!10730-110B1;0.809132!10813-111B3;0.429944!10812-111B2;0.0537769!10037-101F1;0.540247!10172-103C1;0.0740723!10163-103B1;0.113735!10076-102A4;0.0302195!10073-102A1;0.205394!10036-101E9;0.145641!10195-103E6;0.0409308!10277-104E7;0.0814576!10434-106E2;0.0313617!10550-107I1;0.0323493!10545-107H5;0.0563676!10544-107H4;0.204892!10704-109H2;0.68858!10510-107D6;0.703319!10558-107I9;0.94344!10020-101D2;0.106977!10732-110B3;0.225462!10049-101G4;0.726618!10698-109G5;0.55934!10437-106E5;0.891613!10417-106C3;0.522286!10035-101E8;0.597287!10171-103B9;0.0875846!10157-103A4;0.131804!10034-101E7;0.0466702!10072-101I9;0.0712193!10199-103F1;0.157672!10200-103F2;0.778886!10697-109G4;0.0303056!10723-110A3;0.739577!10179-103C8;0.0548711!10160-103A7;0.281897!10180-103C9;0.354435!10162-103A9;0.402819!10021-101D3;0.429937!10840-111E3;0.89685!10706-109H4;0.00531423!10033-101E6;0.772831!10032-101E5;0.266194!10490-107B4;0.086954!10439-106E7;0.257494!10022-101D4;0.137652!10176-103C5;0.187351!10469-106I1;0.0697333!10067-101I4;0.0555142!10411-106B6;0.540983!10471-106I3;0.0163984!10030-101E3;0.0130551!10475-106I7;0.284867!10787-110H4;0.089875!10477-106I9;0.274452!10695-109G2;0.00775678!11771-123I7;0.0731524!11772-123I8;0.503921!11773-123I9;0.165946!10093-102C3;0.0863214!10442-106F1;0.888644!10442-106F1;0.282521!10201-103F3;0.229084!10639-108I9;0.0364124!11843-124H7;0.302359!11841-124H5;0.164756!10693-109F9;0.629925!10436-106E4;0.117894!10483-107A6;0.124356!10282-104F3;0.79235!10023-101D5;0.00963224!10066-101I3;0.00319322!10065-101I2;0.0467277!10800-110I8;0.0130991!10610-108F7;0.0444068!10841-111E4;0.0915042!10541-107H1;0.0503009!10842-111E5;0.000469289!10562-108A4;0.0388297!10024-101D6;0.704896!10064-101I1;0.498299!10609-108F6;0.168419!10048-101G3;0.0752752!10781-110G7;0.770161!10181-103D1;0.103473!10159-103A6;0.205645!10056-101H2;0.29685!10737-110B8;0.0387056!10025-101D7;0.143153!10044-101F8;0.0325452!10424-106D1;0.115004!10463-106H4;0.0485684!10616-108G4;0.476422!10486-107A9;0.508549!10062-101H8;0.114083!10202-103F4;0.888941!10158-103A5;0.909868!10441-106E9;0.104197!10031-101E4;0.0349772!10063-101H9;0.0681834!10063-101H9;0.0877833!11763-123H8;0.232776!11765-123I1;0.298096!11768-123I4;0.13115!10807-111A6;0.196915!10790-110H7;0.904819!10798-110I6;0.439212!10786-110H3;0.245574!10591-108D6;0.990703!10593-108D8;0.474808!10590-108D5;0.655446!10026-101D8;0.80426!10096-102C6;0.01931!10168-103B6;0.00629187!10154-103A1;0.359002!10209-103G2;0.0329502!10061-101H7;0.0834091!10027-101D9;0.0489429!10043-101F7;0.049039!10783-110G9;0.185323!10028-101E1;0.333964!10060-101H6;0.0792073!10203-103F5;0.28598!10059-101H5;0.0615597!10047-101G2;0.0545428!10029-101E2;0.25366!10058-101H4;0.945002!10418-106C4;0.0505554!10492-107B6;0.339551!10694-109G1;0.0358112!10797-110I5;0.0512601!10057-101H3;0.0807116!10100-102D1;0.0179146!10055-101H1;0.70541!10204-103F6;0.192987!10191-103E2;0.102755!10563-108A5;0.248291
|name=CNhs10751_bu_f2
|name=CNhs10751_bu_f2
|tomtom_result=AZF1#MA0277.1;0;4.49308e-05;0.0213871;0.0427181;9;TTTTCTTTT;TTTCTTTTT;-!id1#MA0120.1;0;0.00063782;0.303602;0.239204;9;TTTTCTTTT;TTTTCCTTTTCG;+!Klf4#MA0039.1;1;0.000754783;0.359277;0.239204;9;TTTTCTTTT;CCTTCCTTTA;-!HMG-I/Y#MA0045.1;3;0.00166394;0.792034;0.395499;9;TTTTCTTTT;GTTTTTCCATTTGTTG;-!STAT1#MA0137.1;3;0.00218264;1.03893;0.41503;9;TTTTCTTTT;CAGTTTCATTTTCC;-!hb#MA0049.1;0;0.00450257;2.14322;0.695718;9;TTTTCTTTT;TTTTTTATGC;-!squamosa#MA0082.1;1;0.00512228;2.43821;0.695718;9;TTTTCTTTT;ATTTCCATTTTTGG;-!br_Z1#MA0010.1;3;0.00891015;4.24123;0.901484;9;TTTTCTTTT;GATTTGTCTATTAC;-!SFP1#MA0378.1;11;0.00927527;4.41503;0.901484;9;TTTTCTTTT;ATTGAAAAAAATTTTCTACGG;+!tll#MA0459.1;1;0.00999517;4.7577;0.901484;9;TTTTCTTTT;TTTGACTTTT;-!RME1#MA0370.1;-1;0.01043;4.96466;0.901484;8;TTTTCTTTT;TTCCTTTGGA;-!FOXA1#MA0148.1;2;0.013124;6.247;0.998691;9;TTTTCTTTT;TGTTTACTTTG;+!IRF1#MA0050.1;2;0.0141022;6.71265;0.998691;9;TTTTCTTTT;GGTTTCACTTTC;-
}}
}}

Latest revision as of 12:50, 7 September 2012

Full Name: CNhs10751_bu_f2

Motif matrix
POACGT
10.2259408089041783434.778851801241359.603932547475734532.3556555253259
20.00.00.0576.9643806829464
30.068.139351574303530.0508.8250291086426
41.2017342157429831220.312450751052470.0355.4501957161506
50.0400.205665647293360.0176.75871503565284
60.00.00.0576.9643806829464
70.037.943532955360910.354235632984397528.6666120946016
80.236863208537755970.236863208537755973.741503556155096572.7491507097159
962.3201597403884320.11787330834995324.52336476404259470.002982870165

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AZF1#MA0277.104.49308e-050.02138710.04271819TTTTCTTTTTTTCTTTTT-
id1#MA0120.100.000637820.3036020.2392049TTTTCTTTTTTTTCCTTTTCG+
Klf4#MA0039.110.0007547830.3592770.2392049TTTTCTTTTCCTTCCTTTA-
HMG-I/Y#MA0045.130.001663940.7920340.3954999TTTTCTTTTGTTTTTCCATTTGTTG-
STAT1#MA0137.130.002182641.038930.415039TTTTCTTTTCAGTTTCATTTTCC-
hb#MA0049.100.004502572.143220.6957189TTTTCTTTTTTTTTTATGC-
squamosa#MA0082.110.005122282.438210.6957189TTTTCTTTTATTTCCATTTTTGG-
br_Z1#MA0010.130.008910154.241230.9014849TTTTCTTTTGATTTGTCTATTAC-
SFP1#MA0378.1110.009275274.415030.9014849TTTTCTTTTATTGAAAAAAATTTTCTACGG+
tll#MA0459.110.009995174.75770.9014849TTTTCTTTTTTTGACTTTT-
RME1#MA0370.1-10.010434.964660.9014848TTTTCTTTTTTCCTTTGGA-
FOXA1#MA0148.120.0131246.2470.9986919TTTTCTTTTTGTTTACTTTG+
IRF1#MA0050.120.01410226.712650.9986919TTTTCTTTTGGTTTCACTTTC-
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