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MacroAPE 1083:CNhs12497 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;57.926052018399645;187.93609562146835;58.28043479835284;96.44222876382375!2;56.13835124513824;131.0518145506219;140.38281770401434;73.011827...")
 
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!10534-107G3;0.0116754!10429-106D6;0.0213308!10464-106H5;0.109582!10827-111C8;0.0716642!10789-110H6;0.00268477!10828-111C9;0.0173467!10788-110H5;0.00920542!10792-110H9;0.0064557!10765-110E9;0.00237431!10829-111D1;0.00636969!10830-111D2;0.00639724!10831-111D3;0.0285496!10832-111D4;0.0120512!10833-111D5;0.0111205!10764-110E8;0.00504437!10770-110F5;0.0850153!10399-106A3;0.025111!10400-106A4;0.00719977!10405-106A9;0.0112363!10834-111D6;0.0098741!10835-111D7;0.0170143!10836-111D8;0.0107693!10837-111D9;0.0908214!10699-109G6;0.00498881!10802-111A1;0.0320176!10796-110I4;0.0102265!10010-101C1;0.0503694!10810-111A9;0.00208859!10421-106C7;0.0823385!10708-109H6;0.0569054!12235-129G3;0.0375458!12236-129G4;0.811443!12237-129G5;0.623787!10167-103B5;0.788492!10151-102I7;0.0112495!10428-106D5;0.00634557!10795-110I3;0.946385!10805-111A4;0.00349975!10052-101G7;0.636478!10189-103D9;0.00314441!10589-108D4;0.0103097!10425-106D2;0.0391574!10427-106D4;0.378833!10702-109G9;0.0316323!10432-106D9;0.563531!10496-107C1;0.107137!10718-109I7;0.0823315!10011-101C2;0.006526!10053-101G8;0.00291519!10686-109F2;0.890998!10084-102B3;0.0883065!10012-101C3;0.00971724!10085-102B4;0.00683981!10482-107A5;0.0107293!10419-106C5;0.573078!10080-102A8;0.470688!10760-110E4;0.00132918!10709-109H7;0.0714171!10710-109H8;0.283196!10703-109H1;0.0474212!10719-109I8;0.0870128!10642-109A3;0.109134!10177-103C6;0.784542!10164-103B2;0.0122736!10173-103C2;0.00503624!10166-103B4;0.0227914!10083-102B2;0.00923563!10188-103D8;0.0153299!10552-107I3;0.00333814!10553-107I4;0.00513354!10013-101C4;0.887255!10536-107G5;0.002105!10618-108G6;0.369153!10423-106C9;0.0385823!10785-110H2;0.0107503!12238-129G6;0.095782!12239-129G7;0.777319!12240-129G8;0.452907!10416-106C2;0.728197!10801-110I9;0.0212684!10766-110F1;0.00863695!10824-111C5;0.00717241!10825-111C6;0.0169833!10826-111C7;0.0261382!10454-106G4;0.0275976!10409-106B4;0.00828617!10638-108I8;0.00549118!10636-108I6;0.00627596!10513-107D9;0.0173901!10420-106C6;0.0177904!10082-102B1;0.112203!10014-101C5;0.0104155!10070-101I7;0.00162701!10452-106G2;0.005183!10453-106G3;0.048353!10449-106F8;0.0203257!10042-101F6;0.0216669!10069-101I6;0.0138865!10193-103E4;0.0945151!10631-108I1;0.00921227!10438-106E6;0.0104069!10488-107B2;0.210468!10196-103E7;0.00718702!10071-101I8;0.000662975!10071-101I8;0.0125263!10041-101F5;0.0155678!10451-106G1;0.000776475!10450-106F9;0.0114822!10604-108F1;0.0586686!10605-108F2;0.910563!10606-108F3;0.0690394!10603-108E9;0.696655!10497-107C2;0.436909!10448-106F7;0.0570905!10643-109A4;0.036002!10426-106D3;0.079385!10431-106D8;0.158309!10197-103E8;0.0337578!10443-106F2;0.0269742!10815-111B5;0.0562895!10816-111B6;0.0156441!10817-111B7;0.037562!10015-101C6;0.0240124!10410-106B5;0.00916824!10054-101G9;0.589481!10758-110E2;0.0444017!10711-109H9;0.246627!10040-101F4;0.0036537!10470-106I2;0.0055783!10415-106C1;0.0762253!10198-103E9;0.136398!10614-108G2;0.00497598!10612-108F9;0.049726!10549-107H9;0.0340108!10615-108G3;0.1421!10487-107B1;0.654479!10433-106E1;0.00191907!10688-109F4;0.161298!10444-106F3;0.543704!10444-106F3;0.568604!10485-107A8;0.556162!10413-106B8;0.149577!10175-103C4;0.159821!10161-103A8;0.0131392!12131-128D7;0.00900965!10624-108H3;0.89675!10712-109I1;0.395558!10205-103F7;0.0119403!10206-103F8;0.0122425!10207-103F9;0.00418493!10050-101G5;0.00259923!10051-101G6;0.0450653!10016-101C7;0.0161592!10046-101G1;0.00533026!10778-110G4;0.0152479!10633-108I3;0.364924!10818-111B8;0.846366!10819-111B9;0.00238397!10820-111C1;0.00311197!10484-107A7;0.00290323!10808-111A7;0.285788!10169-103B7;0.0102969!10153-102I9;0.0079676!13425-144D5;0.00499668!13433-144E4;0.23754!13437-144E8;0.243374!11904-125F5;0.0857729!11905-125F6;0.873599!10039-101F3;0.476578!10791-110H8;0.0058092!10017-101C8;0.0543057!10045-101F9;0.00944719!10509-107D5;0.017037!10839-111E2;0.32518!10692-109F8;0.00324403!10079-102A7;0.170254!10078-102A6;0.0159391!10721-110A1;0.0141661!10569-108B2;0.105451!10570-108B3;0.803588!10571-108B4;0.768275!10647-109A8;0.969235!10752-110D5;0.809664!10782-110G8;0.0143066!10726-110A6;0.951921!10018-101C9;0.0847241!10086-102B5;0.441269!10182-103D2;0.846277!10165-103B3;0.0160188!10499-107C4;0.0147722!10408-106B3;0.0681277!10019-101D1;0.104629!10068-101I5;0.0106688!10075-102A3;0.0110733!10077-102A5;0.0223105!10727-110A7;0.15285!10775-110G1;0.00824868!10412-106B7;0.012573!12231-129F8;0.320537!12232-129F9;0.00422158!12233-129G1;0.00310174!12234-129G2;0.00998594!10414-106B9;0.015961!10170-103B8;0.531719!10183-103D3;0.00782775!10150-102I6;0.0096271!10174-103C3;0.00447395!10155-103A2;0.0261648!10038-101F2;0.0111833!10838-111E1;0.0158026!10759-110E3;0.792784!10514-107E1;0.195428!10465-106H6;0.010564!10691-109F7;0.0937348!10843-111E6;0.469535!10844-111E7;0.428543!11747-123G1;0.931473!11748-123G2;0.0497527!11749-123G3;0.456042!11750-123G4;0.0564965!11751-123G5;0.525703!11840-124H4;0.402086!11752-123G6;0.478657!11753-123G7;0.850216!11754-123G8;0.716618!11755-123G9;0.182223!11756-123H1;0.382769!11833-124G6;0.581221!11760-123H5;0.740843!11836-124G9;0.214004!11758-123H3;0.246527!11835-124G8;0.696682!11762-123H7;0.963398!11838-124H2;0.675982!11757-123H2;0.743464!11759-123H4;0.0282154!11761-123H6;0.64859!11842-124H6;0.950564!11837-124H1;0.594048!10568-108B1;0.89066!13230-141I8;0.111297!13231-141I9;0.917723!10696-109G3;0.813081!10493-107B7;0.00126688!10494-107B8;0.0390831!10850-111F4;0.660887!10851-111F5;0.000378645!10852-111F6;0.0296075!10853-111F7;0.0374742!10854-111F8;0.000606124!10855-111F9;0.0563058!10856-111G1;0.533932!10847-111F1;0.000368495!10846-111E9;0.144658!10848-111F2;0.000523056!10845-111E8;0.000192784!10857-111G2;0.27796!10858-111G3;0.00115996!10156-103A3;0.000694146!11901-125F2;0.00501784!11902-125F3;0.236788!11903-125F4;0.425681!10689-109F5;0.307894!10648-109A9;0.00122181!10784-110H1;0.009181!10744-110C6;0.354427!10772-110F7;0.0486179!10474-106I6;0.00396452!10600-108E6;0.0237232!10684-109E9;0.554597!12226-129F3;0.328416!12227-129F4;0.153237!10508-107D4;0.00293916!10539-107G8;0.527603!10607-108F4;0.84834!10555-107I6;0.0413852!10774-110F9;0.7802!10637-108I7;0.0127778!10663-109C6;0.281257!10728-110A8;0.0779629!10729-110A9;0.38097!10430-106D7;0.251502!10730-110B1;0.0596491!10813-111B3;0.419012!10812-111B2;0.394038!10037-101F1;0.793482!10172-103C1;0.00615251!10163-103B1;0.00853163!10076-102A4;0.00546829!10073-102A1;0.00701793!10036-101E9;0.0186064!10195-103E6;0.00608745!10277-104E7;0.0073663!10434-106E2;0.0247635!10550-107I1;0.163511!10545-107H5;0.0740586!10544-107H4;0.0973994!10704-109H2;0.177054!10510-107D6;0.383534!10558-107I9;0.232484!10020-101D2;0.986787!10732-110B3;0.00532506!10049-101G4;0.0127455!10698-109G5;0.439808!10437-106E5;0.0518741!10417-106C3;0.000968429!10035-101E8;0.0900763!10171-103B9;0.00583338!10157-103A4;0.0108226!10034-101E7;0.00479918!10072-101I9;0.00653395!10199-103F1;0.0255204!10200-103F2;0.0238115!10697-109G4;0.0141538!10723-110A3;0.0807532!10179-103C8;0.694779!10160-103A7;0.011101!10180-103C9;0.0156813!10162-103A9;0.0369588!10021-101D3;0.0161029!10840-111E3;0.0123807!10706-109H4;0.0141722!10033-101E6;0.456543!10032-101E5;0.0163805!10490-107B4;0.00667357!10439-106E7;0.0215621!10022-101D4;0.120631!10176-103C5;0.000996076!10469-106I1;0.00653395!10067-101I4;0.0951651!10411-106B6;0.00889593!10471-106I3;0.359822!10030-101E3;0.000367208!10475-106I7;0.00613895!10787-110H4;0.186181!10477-106I9;0.0278623!10695-109G2;0.971106!11771-123I7;0.0235903!11772-123I8;0.566817!11773-123I9;0.407397!10093-102C3;0.00288588!10442-106F1;0.0491332!10442-106F1;0.00952112!10201-103F3;0.0232066!10639-108I9;0.00520784!11843-124H7;0.740968!11841-124H5;0.319056!10693-109F9;0.0393943!10436-106E4;0.0372374!10483-107A6;0.0280039!10282-104F3;0.115786!10023-101D5;0.124804!10066-101I3;0.0694706!10065-101I2;0.24085!10800-110I8;0.0366545!10610-108F7;0.972391!10841-111E4;0.905069!10541-107H1;0.0705878!10842-111E5;0.42137!10562-108A4;0.504785!10024-101D6;0.783783!10064-101I1;0.000379659!10609-108F6;0.0267676!10048-101G3;0.220933!10781-110G7;0.0014298!10181-103D1;0.943002!10159-103A6;0.0252657!10056-101H2;0.014986!10737-110B8;0.0305942!10025-101D7;0.205876!10044-101F8;0.10428!10424-106D1;0.0214706!10463-106H4;0.0218225!10616-108G4;0.0808561!10486-107A9;0.0200418!10062-101H8;0.00917351!10202-103F4;0.00679403!10158-103A5;0.0510045!10441-106E9;0.0213469!10031-101E4;0.769315!10063-101H9;0.00678862!10063-101H9;0.0166237!11763-123H8;0.0353563!11765-123I1;0.522223!11768-123I4;0.195054!10807-111A6;0.697351!10790-110H7;0.653314!10798-110I6;0.13393!10786-110H3;0.793505!10591-108D6;0.573216!10593-108D8;0.181664!10590-108D5;0.974621!10026-101D8;0.0316086!10096-102C6;0.0343743!10168-103B6;0.757632!10154-103A1;0.0186864!10209-103G2;0.010219!10061-101H7;0.0977427!10027-101D9;0.0736188!10043-101F7;0.8395!10783-110G9;0.114589!10028-101E1;0.0328681!10060-101H6;0.000380765!10203-103F5;0.00779995!10059-101H5;0.0883296!10047-101G2;0.133052!10029-101E2;0.154847!10058-101H4;0.0275628!10418-106C4;0.0556018!10492-107B6;0.288309!10694-109G1;0.00870895!10797-110I5;0.0830352!10057-101H3;0.423179!10100-102D1;0.176698!10055-101H1;0.00135384!10204-103F6;0.0144614!10191-103E2;0.000454101!10563-108A5;0.0314427
|name=CNhs12497_bu_f2
|name=CNhs12497_bu_f2
|tomtom_result=Trl#MA0205.1;-1;0.00184275;0.877151;1;9;CGTGCTCCGA;TTGCTCTCTC;+!HAP5#MA0316.1;0;0.0031253;1.48764;1;10;CGTGCTCCGA;TGGGATCTGATTGGT;+!RTG3#MA0376.1;9;0.00433506;2.06349;1;10;CGTGCTCCGA;GACTAAGCACGTGCTAATAT;-!kni#MA0451.1;-1;0.00719335;3.42404;1;9;CGTGCTCCGA;GTGCTCTAGTTT;-!ECM23#MA0293.1;1;0.0119175;5.67273;1;10;CGTGCTCCGA;TTTAGATCTTT;-!BAS1#MA0278.1;11;0.0128776;6.12972;1;10;CGTGCTCCGA;TTGACTTGACTCTGGCTGTGC;-
}}
}}

Latest revision as of 12:50, 7 September 2012

Full Name: CNhs12497_bu_f2

Motif matrix
POACGT
157.926052018399645187.9360956214683558.2804347983528496.44222876382375
256.13835124513824131.0518145506219140.3828177040143473.01182770227008
37.28472176437909315.65875347848343173.2376662431872204.4036697159948
42.834830491967551151.62926862810707233.9298126740549412.190899407914909
50.0400.584811202044650.00.0
60.00.00.0400.58481120204465
70.0400.584811202044650.00.0
854.247253611919184181.526622919345029.102024360679103155.70891031010117
924.65341280009489135.74544672583082141.237762104271798.9481895718472
10123.51645800656402119.688224209437339.4294752743253117.950653711718

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.1-10.001842750.87715119CGTGCTCCGATTGCTCTCTC+
HAP5#MA0316.100.00312531.48764110CGTGCTCCGATGGGATCTGATTGGT+
RTG3#MA0376.190.004335062.06349110CGTGCTCCGAGACTAAGCACGTGCTAATAT-
kni#MA0451.1-10.007193353.4240419CGTGCTCCGAGTGCTCTAGTTT-
ECM23#MA0293.110.01191755.67273110CGTGCTCCGATTTAGATCTTT-
BAS1#MA0278.1110.01287766.12972110CGTGCTCCGATTGACTTGACTCTGGCTGTGC-
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