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MacroAPE 1083:GATCGCT,motif797: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;47.833;109.553;1201.997;183.617!2;1095.53;219.106;226.821;1.543!3;336.374;74.064;70.978;1061.584!4;109.553;1297.663;134.241;1.543!5;217.563;...")
 
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27-111C8;0.281776!10789-110H6;0.865286!10828-111C9;0.721327!10788-110H5;0.74127!10792-110H9;0.413767!10765-110E9;0.881474!10829-111D1;0.98066!10830-111D2;0.908121!10831-111D3;0.0455976!10832-111D4;0.239985!10833-111D5;0.678141!10764-110E8;0.756863!10770-110F5;0.602248!10399-106A3;0.556017!10400-106A4;0.469298!10405-106A9;0.445587!10834-111D6;0.540152!10835-111D7;0.864979!10836-111D8;0.696172!10837-111D9;0.950147!10699-109G6;0.453755!10802-111A1;0.969031!10796-110I4;0.490301!10010-101C1;0.487289!10810-111A9;0.518128!10421-106C7;0.325438!10708-109H6;0.449117!12235-129G3;0.366363!12236-129G4;0.433126!12237-129G5;0.658032!10167-103B5;0.56418!10151-102I7;0.753618!10428-106D5;0.829139!10795-110I3;0.211617!10805-111A4;0.792994!10052-101G7;0.24283!10189-103D9;0.659347!10589-108D4;0.768782!10425-106D2;0.107158!10427-106D4;0.00325623!10702-109G9;0.30673!10432-106D9;0.466528!10496-107C1;0.263556!10718-109I7;0.72156!10011-101C2;0.698625!10053-101G8;0.838167!10686-109F2;0.707042!10084-102B3;0.769363!10012-101C3;0.897544!10085-102B4;0.864309!10482-107A5;0.484026!10419-106C5;0.431688!10080-102A8;0.194257!10760-110E4;0.191794!10709-109H7;0.300839!10710-109H8;0.22398!10703-109H1;0.494027!10719-109I8;0.0168955!10642-109A3;0.0591422!10177-103C6;0.0454699!10164-103B2;0.716895!10173-103C2;0.848248!10166-103B4;0.559602!10083-102B2;0.616369!10188-103D8;0.895868!10552-107I3;0.894591!10553-107I4;0.718514!10013-101C4;0.199183!10536-107G5;0.935162!10618-108G6;0.166689!10423-106C9;0.349313!10785-110H2;0.215523!12238-129G6;0.316827!12239-129G7;0.283348!12240-129G8;0.233093!10416-106C2;0.270834!10801-110I9;0.939441!10766-110F1;0.699942!10824-111C5;0.788663!10825-111C6;0.647789!10826-111C7;0.680903!10454-106G4;0.637435!10409-106B4;0.46954!10638-108I8;0.247457!10636-108I6;0.926127!10513-107D9;0.693825!10420-106C6;0.455425!10082-102B1;0.000669772!10014-101C5;0.187237!10070-101I7;0.467873!10452-106G2;0.560583!10453-106G3;0.121788!10449-106F8;0.131893!10042-101F6;0.153277!10069-101I6;0.85774!10193-103E4;0.560194!10631-108I1;0.982182!10438-106E6;0.40327!10488-107B2;0.141654!10196-103E7;0.842357!10071-101I8;0.913986!10071-101I8;0.506924!10041-101F5;0.31582!10451-106G1;0.892528!10450-106F9;0.0824839!10604-108F1;0.00516576!10605-108F2;0.331668!10606-108F3;0.256654!10603-108E9;0.212163!10497-107C2;0.223126!10448-106F7;0.97429!10643-109A4;0.378732!10426-106D3;0.793526!10431-106D8;0.493283!10197-103E8;0.537389!10443-106F2;0.526109!10815-111B5;0.277853!10816-111B6;0.850633!10817-111B7;0.965176!10015-101C6;0.799428!10410-106B5;0.687761!10054-101G9;0.0816312!10758-110E2;0.97529!10711-109H9;0.142403!10040-101F4;0.372051!10470-106I2;0.698583!10415-106C1;0.570695!10198-103E9;0.0835049!10614-108G2;0.391281!10612-108F9;0.736142!10549-107H9;0.972797!10615-108G3;0.366073!10487-107B1;0.149081!10433-106E1;0.749952!10688-109F4;0.0730995!10444-106F3;0.902716!10444-106F3;0.363655!10485-107A8;0.347037!10413-106B8;0.571147!10175-103C4;0.0548373!10161-103A8;0.932187!12131-128D7;0.959148!10624-108H3;0.421102!10712-109I1;0.613228!10205-103F7;0.703687!10206-103F8;0.547545!10207-103F9;0.621084!10050-101G5;0.761653!10051-101G6;0.143143!10016-101C7;0.142323!10046-101G1;0.235808!10778-110G4;0.781663!10633-108I3;0.281749!10818-111B8;0.306689!10819-111B9;0.729646!10820-111C1;0.64417!10484-107A7;0.72525!10808-111A7;0.588298!10169-103B7;0.717387!10153-102I9;0.825115!13425-144D5;0.813422!13433-144E4;0.008457!13437-144E8;0.0318016!11904-125F5;0.045018!11905-125F6;0.389975!10039-101F3;0.672062!10791-110H8;0.762621!10017-101C8;0.861236!10045-101F9;0.745179!10509-107D5;0.600322!10839-111E2;0.0995283!10692-109F8;0.581073!10079-102A7;0.60187!10078-102A6;0.346035!10721-110A1;0.0946736!10569-108B2;0.724088!10570-108B3;0.0572054!10571-108B4;0.123919!10647-109A8;0.17682!10752-110D5;0.249314!10782-110G8;0.299504!10726-110A6;0.520275!10018-101C9;0.172693!10086-102B5;0.176979!10182-103D2;0.126707!10165-103B3;0.970417!10499-107C4;0.978254!10408-106B3;0.369759!10019-101D1;0.468391!10068-101I5;0.818858!10075-102A3;0.450876!10077-102A5;0.658383!10727-110A7;0.72909!10775-110G1;0.912798!10412-106B7;0.944371!12231-129F8;0.0225152!12232-129F9;0.651107!12233-129G1;0.937958!12234-129G2;0.972889!10414-106B9;0.716103!10170-103B8;0.195018!10183-103D3;0.721406!10150-102I6;0.787208!10174-103C3;0.823569!10155-103A2;0.884411!10038-101F2;0.890104!10838-111E1;0.980724!10759-110E3;0.0192504!10514-107E1;0.42625!10465-106H6;0.0414561!10691-109F7;0.00576839!10843-111E6;0.72449!10844-111E7;0.0291706!11747-123G1;0.0514383!11748-123G2;0.756016!11749-123G3;0.442171!11750-123G4;0.626711!11751-123G5;0.262443!11840-124H4;0.212624!11752-123G6;0.214508!11753-123G7;0.187083!11754-123G8;0.399669!11755-123G9;0.571676!11756-123H1;0.562555!11833-124G6;0.566325!11760-123H5;0.684529!11836-124G9;0.802019!11758-123H3;0.377895!11835-124G8;0.21035!11762-123H7;0.30825!11838-124H2;0.624351!11757-123H2;0.319915!11759-123H4;0.808351!11761-123H6;0.590847!11842-124H6;0.581838!11837-124H1;0.472999!10568-108B1;0.374486!13230-141I8;0.237496!13231-141I9;0.479232!10696-109G3;0.646257!10493-107B7;0.884844!10494-107B8;0.412812!10850-111F4;0.161083!10851-111F5;0.357526!10852-111F6;0.963096!10853-111F7;0.313439!10854-111F8;0.616497!10855-111F9;0.887178!10856-111G1;0.39236!10847-111F1;0.971761!10846-111E9;0.833513!10848-111F2;0.999341!10845-111E8;0.642701!10857-111G2;0.0628798!10858-111G3;0.96461!10156-103A3;0.464457!11901-125F2;0.812203!11902-125F3;0.771899!11903-125F4;0.792175!10689-109F5;0.777409!10648-109A9;0.793008!10784-110H1;0.699544!10744-110C6;0.381904!10772-110F7;0.614787!10474-106I6;0.424944!10600-108E6;0.796194!10684-109E9;0.0530298!12226-129F3;0.578633!12227-129F4;0.907746!10508-107D4;0.45886!10539-107G8;0.118601!10607-108F4;0.385974!10555-107I6;0.0154796!10774-110F9;0.154306!10637-108I7;0.131182!10663-109C6;0.0113339!10728-110A8;0.0541673!10729-110A9;0.132591!10430-106D7;0.292429!10730-110B1;0.107057!10813-111B3;0.110256!10812-111B2;0.318531!10037-101F1;0.173667!10172-103C1;0.777715!10163-103B1;0.619869!10076-102A4;0.81089!10073-102A1;0.901935!10036-101E9;0.343423!10195-103E6;0.834018!10277-104E7;0.823302!10434-106E2;0.927116!10550-107I1;0.356392!10545-107H5;0.165637!10544-107H4;0.526654!10704-109H2;0.196857!10510-107D6;0.0186914!10558-107I9;0.0254377!10020-101D2;0.0354815!10732-110B3;0.682645!10049-101G4;0.943408!10698-109G5;0.593191!10437-106E5;0.335332!10417-106C3;0.796073!10035-101E8;0.588055!10171-103B9;0.806895!10157-103A4;0.819185!10034-101E7;0.809476!10072-101I9;0.801701!10199-103F1;0.235705!10200-103F2;0.845035!10697-109G4;0.439448!10723-110A3;0.0146528!10179-103C8;0.461805!10160-103A7;0.600155!10180-103C9;0.450032!10162-103A9;0.741263!10021-101D3;0.790747!10840-111E3;0.765019!10706-109H4;0.605575!10033-101E6;0.0835406!10032-101E5;0.853958!10490-107B4;0.840428!10439-106E7;0.624063!10022-101D4;0.206149!10176-103C5;0.956907!10469-106I1;0.711969!10067-101I4;0.488059!10411-106B6;0.673716!10471-106I3;0.927536!10030-101E3;0.735283!10475-106I7;0.796289!10787-110H4;0.102381!10477-106I9;0.557315!10695-109G2;0.0172891!11771-123I7;0.793316!11772-123I8;0.85674!11773-123I9;0.916465!10093-102C3;0.757598!10442-106F1;0.988768!10442-106F1;0.137906!10201-103F3;0.0924731!10639-108I9;0.486451!11843-124H7;0.810101!11841-124H5;0.931577!10693-109F9;0.676438!10436-106E4;0.572534!10483-107A6;0.714145!10282-104F3;0.669619!10023-101D5;0.0894412!10066-101I3;0.160841!10065-101I2;0.658545!10800-110I8;0.736!10610-108F7;0.123737!10841-111E4;0.046281!10541-107H1;0.0678237!10842-111E5;0.00614358!10562-108A4;0.0395528!10024-101D6;0.126848!10064-101I1;0.243059!10609-108F6;0.778642!10048-101G3;0.479867!10781-110G7;0.924021!10181-103D1;0.0945004!10159-103A6;0.899121!10056-101H2;0.822468!10737-110B8;0.99012!10025-101D7;0.940453!10044-101F8;0.897043!10424-106D1;0.645312!10463-106H4;0.862681!10616-108G4;0.392291!10486-107A9;0.777906!10062-101H8;0.803816!10202-103F4;0.795266!10158-103A5;0.908471!10441-106E9;0.962906!10031-101E4;0.0410613!10063-101H9;0.894827!10063-101H9;0.281186!11763-123H8;0.841634!11765-123I1;0.36205!11768-123I4;0.339469!10807-111A6;0.355637!10790-110H7;0.00352113!10798-110I6;0.00441781!10786-110H3;0.166648!10591-108D6;0.00939296!10593-108D8;0.0130869!10590-108D5;0.000133697!10026-101D8;0.0251118!10096-102C6;0.842367!10168-103B6;0.35411!10154-103A1;0.89645!10209-103G2;0.879414!10061-101H7;0.423332!10027-101D9;0.926971!10043-101F7;0.159667!10783-110G9;0.215736!10028-101E1;0.678409!10060-101H6;0.866728!10203-103F5;0.840525!10059-101H5;0.3153!10047-101G2;0.367108!10029-101E2;0.800186!10058-101H4;0.524544!10418-106C4;0.635694!10492-107B6;0.0312432!10694-109G1;0.164951!10797-110I5;0.528939!10057-101H3;0.876624!10100-102D1;0.438921!10055-101H1;0.804664!10204-103F6;0.939788!10191-103E2;0.993945!10563-108A5;0.33646
|name=GATCGCT,motif797,CNhs11981,T:1543.0(51.57%),B:30299.6(41.47%),P:1e-28
|name=GATCGCT,motif797,CNhs11981,T:1543.0(51.57%),B:30299.6(41.47%),P:1e-28
|tomtom_result=lin-14#MA0261.1;0;0.0113545;5.40474;1;6;GATCGCT;GAACAC;+!YY1#MA0095.1;0;0.0173446;8.25603;1;6;GATCGCT;GATGGC;-
}}
}}

Latest revision as of 13:13, 7 September 2012

Full Name: GATCGCT,motif797,CNhs11981,T:1543.0(51.57%),B:30299.6(41.47%),P:1e-28

Motif matrix
POACGT
147.833109.5531201.997183.617
21095.53219.106226.8211.543
3336.37474.06470.9781061.584
4109.5531297.663134.2411.543
5217.5636.1721317.7221.543
6293.171075.471172.8161.543
71.543365.691450.556725.21

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
lin-14#MA0261.100.01135455.4047416GATCGCTGAACAC+
YY1#MA0095.100.01734468.2560316GATCGCTGATGGC-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:GATCGCT,motif797&oldid=2133923"