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MacroAPE 1083:Motif GNATCT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1680;0!02;420;420;420;420!03;1680;0;0;0!04;0;0;0;1680!05;0;1680;0;0!06;0;0;0;1680 |macroape_1083_sample_pvalues=11376-118A8;0.733081!1...")
 
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88-110H5;0.18137!10792-110H9;0.35317!10765-110E9;0.503127!10829-111D1;0.351166!10830-111D2;0.414068!10831-111D3;0.296466!10832-111D4;0.511669!10833-111D5;0.189375!10764-110E8;0.364817!10770-110F5;0.274001!10399-106A3;0.40168!10400-106A4;0.4783!10405-106A9;0.463567!10834-111D6;0.465425!10835-111D7;0.389161!10836-111D8;0.985779!10837-111D9;0.183073!10699-109G6;0.445259!10802-111A1;0.295911!10796-110I4;0.244255!10010-101C1;0.903501!10810-111A9;0.768549!10421-106C7;0.50298!10708-109H6;0.981715!12235-129G3;0.8276!12236-129G4;0.719452!12237-129G5;0.913604!10167-103B5;0.762774!10151-102I7;0.306343!10428-106D5;0.354758!10795-110I3;0.938555!10805-111A4;0.55697!10052-101G7;0.864443!10189-103D9;0.650698!10589-108D4;0.356414!10425-106D2;0.293341!10427-106D4;0.729831!10702-109G9;0.146686!10432-106D9;0.591095!10496-107C1;0.423969!10718-109I7;0.762969!10011-101C2;0.403376!10053-101G8;0.590248!10686-109F2;0.401696!10084-102B3;0.464432!10012-101C3;0.414225!10085-102B4;0.351414!10482-107A5;0.467117!10419-106C5;0.377379!10080-102A8;0.536683!10760-110E4;0.461837!10709-109H7;0.632961!10710-109H8;0.989559!10703-109H1;0.408761!10719-109I8;0.374434!10642-109A3;0.965975!10177-103C6;0.856273!10164-103B2;0.309688!10173-103C2;0.264459!10166-103B4;0.332443!10083-102B2;0.318943!10188-103D8;0.346161!10552-107I3;0.420227!10553-107I4;0.173723!10013-101C4;0.0425012!10536-107G5;0.364864!10618-108G6;0.326063!10423-106C9;0.173704!10785-110H2;0.16072!12238-129G6;0.217482!12239-129G7;0.834136!12240-129G8;0.800743!10416-106C2;0.549139!10801-110I9;0.427405!10766-110F1;0.824989!10824-111C5;0.546118!10825-111C6;0.410177!10826-111C7;0.467947!10454-106G4;0.479047!10409-106B4;0.518684!10638-108I8;0.652531!10636-108I6;0.955569!10513-107D9;0.234923!10420-106C6;0.448491!10082-102B1;0.668854!10014-101C5;0.830239!10070-101I7;0.384579!10452-106G2;0.58225!10453-106G3;0.810098!10449-106F8;0.83486!10042-101F6;0.77448!10069-101I6;0.323357!10193-103E4;0.715677!10631-108I1;0.339356!10438-106E6;0.420099!10488-107B2;0.257809!10196-103E7;0.615586!10071-101I8;0.167908!10071-101I8;0.18262!10041-101F5;0.3937!10451-106G1;0.595681!10450-106F9;0.493484!10604-108F1;0.319081!10605-108F2;0.840485!10606-108F3;0.955884!10603-108E9;0.591447!10497-107C2;0.630127!10448-106F7;0.664477!10643-109A4;0.626985!10426-106D3;0.352855!10431-106D8;0.359789!10197-103E8;0.301661!10443-106F2;0.793845!10815-111B5;0.129354!10816-111B6;0.263856!10817-111B7;0.22571!10015-101C6;0.270081!10410-106B5;0.576403!10054-101G9;0.700081!10758-110E2;0.620168!10711-109H9;0.481711!10040-101F4;0.36993!10470-106I2;0.309642!10415-106C1;0.222839!10198-103E9;0.561824!10614-108G2;0.534221!10612-108F9;0.857086!10549-107H9;0.420419!10615-108G3;0.4993!10487-107B1;0.124421!10433-106E1;0.423209!10688-109F4;0.993668!10444-106F3;0.272897!10444-106F3;0.0822685!10485-107A8;0.104606!10413-106B8;0.271318!10175-103C4;0.679882!10161-103A8;0.283382!12131-128D7;0.284012!10624-108H3;0.957548!10712-109I1;0.368412!10205-103F7;0.528741!10206-103F8;0.610347!10207-103F9;0.684179!10050-101G5;0.98273!10051-101G6;0.654419!10016-101C7;0.959883!10046-101G1;0.761301!10778-110G4;0.892844!10633-108I3;0.942584!10818-111B8;0.466104!10819-111B9;0.312087!10820-111C1;0.316299!10484-107A7;0.311967!10808-111A7;0.213688!10169-103B7;0.267689!10153-102I9;0.298206!13425-144D5;0.359116!13433-144E4;0.998928!13437-144E8;0.728176!11904-125F5;0.85792!11905-125F6;0.740928!10039-101F3;0.56674!10791-110H8;0.348254!10017-101C8;0.619189!10045-101F9;0.821423!10509-107D5;0.924607!10839-111E2;0.622254!10692-109F8;0.464167!10079-102A7;0.188895!10078-102A6;0.742271!10721-110A1;0.843604!10569-108B2;0.50583!10570-108B3;0.503316!10571-108B4;0.275369!10647-109A8;0.422547!10752-110D5;0.89359!10782-110G8;0.564617!10726-110A6;0.853175!10018-101C9;0.295749!10086-102B5;0.792804!10182-103D2;0.607789!10165-103B3;0.404912!10499-107C4;0.322178!10408-106B3;0.479689!10019-101D1;0.498062!10068-101I5;0.856358!10075-102A3;0.569324!10077-102A5;0.977486!10727-110A7;0.805501!10775-110G1;0.381895!10412-106B7;0.174042!12231-129F8;0.137521!12232-129F9;0.137664!12233-129G1;0.209217!12234-129G2;0.116507!10414-106B9;0.162374!10170-103B8;0.20899!10183-103D3;0.338162!10150-102I6;0.326094!10174-103C3;0.393824!10155-103A2;0.543839!10038-101F2;0.422081!10838-111E1;0.415946!10759-110E3;0.927706!10514-107E1;0.679443!10465-106H6;0.345365!10691-109F7;0.564201!10843-111E6;0.970181!10844-111E7;0.381855!11747-123G1;0.626461!11748-123G2;0.524141!11749-123G3;0.652613!11750-123G4;0.350015!11751-123G5;0.818064!11840-124H4;0.70124!11752-123G6;0.753333!11753-123G7;0.694659!11754-123G8;0.47384!11755-123G9;0.187936!11756-123H1;0.128658!11833-124G6;0.329486!11760-123H5;0.850647!11836-124G9;0.268138!11758-123H3;0.256339!11835-124G8;0.309157!11762-123H7;0.491673!11838-124H2;0.791779!11757-123H2;0.305537!11759-123H4;0.231334!11761-123H6;0.596569!11842-124H6;0.431903!11837-124H1;0.329484!10568-108B1;0.371776!13230-141I8;0.448526!13231-141I9;0.506811!10696-109G3;0.558915!10493-107B7;0.812056!10494-107B8;0.963145!10850-111F4;0.636686!10851-111F5;0.380948!10852-111F6;0.209732!10853-111F7;0.352202!10854-111F8;0.524192!10855-111F9;0.365475!10856-111G1;0.50593!10847-111F1;0.978982!10846-111E9;0.583791!10848-111F2;0.789308!10845-111E8;0.739321!10857-111G2;0.770883!10858-111G3;0.332048!10156-103A3;0.281503!11901-125F2;0.383985!11902-125F3;0.29293!11903-125F4;0.478666!10689-109F5;0.34959!10648-109A9;0.1776!10784-110H1;0.301623!10744-110C6;0.545258!10772-110F7;0.467246!10474-106I6;0.55869!10600-108E6;0.540391!10684-109E9;0.621384!12226-129F3;0.734667!12227-129F4;0.552979!10508-107D4;0.486818!10539-107G8;0.844797!10607-108F4;0.431713!10555-107I6;0.434022!10774-110F9;0.908845!10637-108I7;0.226133!10663-109C6;0.449598!10728-110A8;0.962968!10729-110A9;0.271066!10430-106D7;0.768025!10730-110B1;0.375344!10813-111B3;0.819358!10812-111B2;0.596454!10037-101F1;0.80135!10172-103C1;0.319379!10163-103B1;0.321743!10076-102A4;0.383763!10073-102A1;0.329314!10036-101E9;0.299305!10195-103E6;0.378603!10277-104E7;0.40204!10434-106E2;0.0864236!10550-107I1;0.358338!10545-107H5;0.601526!10544-107H4;0.216951!10704-109H2;0.448668!10510-107D6;0.779645!10558-107I9;0.278117!10020-101D2;0.0732765!10732-110B3;0.452194!10049-101G4;0.477657!10698-109G5;0.257984!10437-106E5;0.377392!10417-106C3;0.771146!10035-101E8;0.630802!10171-103B9;0.332863!10157-103A4;0.284635!10034-101E7;0.398122!10072-101I9;0.350826!10199-103F1;0.408108!10200-103F2;0.581563!10697-109G4;0.557973!10723-110A3;0.854381!10179-103C8;0.389297!10160-103A7;0.530852!10180-103C9;0.606184!10162-103A9;0.347225!10021-101D3;0.417699!10840-111E3;0.619804!10706-109H4;0.192305!10033-101E6;0.270418!10032-101E5;0.322248!10490-107B4;0.352119!10439-106E7;0.446674!10022-101D4;0.33443!10176-103C5;0.436892!10469-106I1;0.262138!10067-101I4;0.632988!10411-106B6;0.184557!10471-106I3;0.651247!10030-101E3;0.287209!10475-106I7;0.582597!10787-110H4;0.250398!10477-106I9;0.46219!10695-109G2;0.963572!11771-123I7;0.0957485!11772-123I8;0.408204!11773-123I9;0.317223!10093-102C3;0.607115!10442-106F1;0.915513!10442-106F1;0.494284!10201-103F3;0.460439!10639-108I9;0.206582!11843-124H7;0.722882!11841-124H5;0.735783!10693-109F9;0.92727!10436-106E4;0.246734!10483-107A6;0.1328!10282-104F3;0.777969!10023-101D5;0.688681!10066-101I3;0.602077!10065-101I2;0.805325!10800-110I8;0.650709!10610-108F7;0.656889!10841-111E4;0.205262!10541-107H1;0.811426!10842-111E5;0.532419!10562-108A4;0.641297!10024-101D6;0.428649!10064-101I1;0.448983!10609-108F6;0.370911!10048-101G3;0.166837!10781-110G7;0.432047!10181-103D1;0.138051!10159-103A6;0.410458!10056-101H2;0.360303!10737-110B8;0.495785!10025-101D7;0.65004!10044-101F8;0.637304!10424-106D1;0.979461!10463-106H4;0.334316!10616-108G4;0.432721!10486-107A9;0.536452!10062-101H8;0.487049!10202-103F4;0.700767!10158-103A5;0.565203!10441-106E9;0.254298!10031-101E4;0.352682!10063-101H9;0.373594!10063-101H9;0.395645!11763-123H8;0.303538!11765-123I1;0.677863!11768-123I4;0.986878!10807-111A6;0.914058!10790-110H7;0.749317!10798-110I6;0.552954!10786-110H3;0.673858!10591-108D6;0.463881!10593-108D8;0.880163!10590-108D5;0.712678!10026-101D8;0.327719!10096-102C6;0.614012!10168-103B6;0.617381!10154-103A1;0.301301!10209-103G2;0.259055!10061-101H7;0.965076!10027-101D9;0.844706!10043-101F7;0.961362!10783-110G9;0.874596!10028-101E1;0.92583!10060-101H6;0.291562!10203-103F5;0.699645!10059-101H5;0.777858!10047-101G2;0.886578!10029-101E2;0.672491!10058-101H4;0.598415!10418-106C4;0.817631!10492-107B6;0.311205!10694-109G1;0.872268!10797-110I5;0.0600726!10057-101H3;0.649618!10100-102D1;0.915861!10055-101H1;0.269983!10204-103F6;0.229162!10191-103E2;0.467796!10563-108A5;0.540585
|name=motif_GNATCT
|name=motif_GNATCT
|tomtom_result=ARR10#MA0121.1;2;0.000513302;0.244332;0.488663;6;GAATCT;GCGGATCT;-!Gata1#MA0035.1;0;0.00558197;2.65702;1;6;GAATCT;CCATCC;-!HAP5#MA0316.1;2;0.014707;7.00053;1;6;GAATCT;TGGGATCTGATTGGT;+!GATA2#MA0036.1;-1;0.0153946;7.32785;1;5;GAATCT;TATCC;-!ARG80#MA0271.1;0;0.0186008;8.854;1;6;GAATCT;GCGTCT;-
}}
}}

Latest revision as of 13:23, 7 September 2012

Full Name: motif_GNATCT

Motif matrix
POACGT
010016800
02420420420420
031680000
040001680
050168000
060001680

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARR10#MA0121.120.0005133020.2443320.4886636GAATCTGCGGATCT-
Gata1#MA0035.100.005581972.6570216GAATCTCCATCC-
HAP5#MA0316.120.0147077.0005316GAATCTTGGGATCTGATTGGT+
GATA2#MA0036.1-10.01539467.3278515GAATCTTATCC-
ARG80#MA0271.100.01860088.85416GAATCTGCGTCT-
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