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MacroAPE 1083:Motif CNGGAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;8608;0;0!02;2152;2152;2152;2152!03;0;0;8608;0!04;0;0;8608;0!05;8608;0;0;0!06;0;0;0;8608 |macroape_1083_sample_pvalues=11376-118A8;0.4395...")
 
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0429-106D6;0.730339!10464-106H5;0.483015!10827-111C8;0.556609!10789-110H6;0.28508!10828-111C9;0.50451!10788-110H5;0.364288!10792-110H9;0.674882!10765-110E9;0.357565!10829-111D1;0.469844!10830-111D2;0.456449!10831-111D3;0.759326!10832-111D4;0.752639!10833-111D5;0.444857!10764-110E8;0.422317!10770-110F5;0.329388!10399-106A3;0.463624!10400-106A4;0.548355!10405-106A9;0.545294!10834-111D6;0.553862!10835-111D7;0.517978!10836-111D8;0.621024!10837-111D9;0.357828!10699-109G6;0.624362!10802-111A1;0.919352!10796-110I4;0.521036!10010-101C1;0.670832!10810-111A9;0.641383!10421-106C7;0.839326!10708-109H6;0.849785!12235-129G3;0.7274!12236-129G4;0.97082!12237-129G5;0.545912!10167-103B5;0.67392!10151-102I7;0.774741!10428-106D5;0.795588!10795-110I3;0.0999995!10805-111A4;0.608031!10052-101G7;0.876814!10189-103D9;0.873198!10589-108D4;0.655775!10425-106D2;0.401845!10427-106D4;0.631546!10702-109G9;0.294948!10432-106D9;0.923632!10496-107C1;0.569328!10718-109I7;0.398861!10011-101C2;0.692467!10053-101G8;0.774443!10686-109F2;0.112097!10084-102B3;0.13288!10012-101C3;0.753661!10085-102B4;0.807389!10482-107A5;0.936955!10419-106C5;0.859917!10080-102A8;0.787938!10760-110E4;0.759712!10709-109H7;0.949494!10710-109H8;0.944108!10703-109H1;0.400142!10719-109I8;0.567612!10642-109A3;0.983203!10177-103C6;0.615994!10164-103B2;0.837829!10173-103C2;0.823497!10166-103B4;0.628392!10083-102B2;0.916388!10188-103D8;0.717416!10552-107I3;0.839122!10553-107I4;0.488017!10013-101C4;0.0518723!10536-107G5;0.629426!10618-108G6;0.67748!10423-106C9;0.920458!10785-110H2;0.930326!12238-129G6;0.992124!12239-129G7;0.467113!12240-129G8;0.308232!10416-106C2;0.457502!10801-110I9;0.690031!10766-110F1;0.691035!10824-111C5;0.514054!10825-111C6;0.350445!10826-111C7;0.349788!10454-106G4;0.388856!10409-106B4;0.357156!10638-108I8;0.605666!10636-108I6;0.91401!10513-107D9;0.822284!10420-106C6;0.374545!10082-102B1;0.735304!10014-101C5;0.967976!10070-101I7;0.675248!10452-106G2;0.891526!10453-106G3;0.194328!10449-106F8;0.329515!10042-101F6;0.329629!10069-101I6;0.719445!10193-103E4;0.959389!10631-108I1;0.747735!10438-106E6;0.546654!10488-107B2;0.359473!10196-103E7;0.652007!10071-101I8;0.965755!10071-101I8;0.753077!10041-101F5;0.922382!10451-106G1;0.492298!10450-106F9;0.50696!10604-108F1;0.598607!10605-108F2;0.959527!10606-108F3;0.502652!10603-108E9;0.90604!10497-107C2;0.787348!10448-106F7;0.930737!10643-109A4;0.507377!10426-106D3;0.668127!10431-106D8;0.998956!10197-103E8;0.887914!10443-106F2;0.972862!10815-111B5;0.286753!10816-111B6;0.578625!10817-111B7;0.642303!10015-101C6;0.587668!10410-106B5;0.858711!10054-101G9;0.79356!10758-110E2;0.89675!10711-109H9;0.304493!10040-101F4;0.282716!10470-106I2;0.800014!10415-106C1;0.378373!10198-103E9;0.650295!10614-108G2;0.576288!10612-108F9;0.84933!10549-107H9;0.42869!10615-108G3;0.725164!10487-107B1;0.279912!10433-106E1;0.400921!10688-109F4;0.184849!10444-106F3;0.380793!10444-106F3;0.0275236!10485-107A8;0.0390785!10413-106B8;0.761908!10175-103C4;0.431033!10161-103A8;0.829142!12131-128D7;0.872705!10624-108H3;0.496992!10712-109I1;0.482616!10205-103F7;0.15083!10206-103F8;0.937656!10207-103F9;0.952872!10050-101G5;0.672955!10051-101G6;0.835829!10016-101C7;0.717965!10046-101G1;0.952043!10778-110G4;0.937931!10633-108I3;0.851704!10818-111B8;0.317454!10819-111B9;0.539416!10820-111C1;0.518234!10484-107A7;0.559695!10808-111A7;0.177839!10169-103B7;0.749597!10153-102I9;0.792497!13425-144D5;0.82252!13433-144E4;0.554882!13437-144E8;0.586261!11904-125F5;0.670317!11905-125F6;0.350324!10039-101F3;0.504314!10791-110H8;0.780166!10017-101C8;0.549543!10045-101F9;0.969547!10509-107D5;0.782678!10839-111E2;0.356329!10692-109F8;0.694922!10079-102A7;0.937877!10078-102A6;0.933799!10721-110A1;0.773075!10569-108B2;0.626898!10570-108B3;0.402267!10571-108B4;0.81087!10647-109A8;0.15156!10752-110D5;0.481305!10782-110G8;0.605509!10726-110A6;0.692884!10018-101C9;0.680009!10086-102B5;0.646374!10182-103D2;0.111888!10165-103B3;0.7494!10499-107C4;0.803367!10408-106B3;0.652888!10019-101D1;0.897305!10068-101I5;0.624324!10075-102A3;0.794894!10077-102A5;0.675524!10727-110A7;0.13097!10775-110G1;0.391068!10412-106B7;0.490863!12231-129F8;0.406798!12232-129F9;0.621774!12233-129G1;0.520899!12234-129G2;0.7213!10414-106B9;0.948906!10170-103B8;0.577363!10183-103D3;0.696838!10150-102I6;0.830008!10174-103C3;0.869512!10155-103A2;0.652783!10038-101F2;0.715164!10838-111E1;0.774921!10759-110E3;0.788021!10514-107E1;0.827546!10465-106H6;0.729241!10691-109F7;0.580958!10843-111E6;0.35494!10844-111E7;0.519646!11747-123G1;0.128567!11748-123G2;0.122724!11749-123G3;0.025337!11750-123G4;0.0938426!11751-123G5;0.27779!11840-124H4;0.316316!11752-123G6;0.780959!11753-123G7;0.131091!11754-123G8;0.134708!11755-123G9;0.0181242!11756-123H1;0.0101113!11833-124G6;0.062728!11760-123H5;0.067507!11836-124G9;0.0104091!11758-123H3;0.0150298!11835-124G8;0.0651791!11762-123H7;0.192417!11838-124H2;0.208216!11757-123H2;0.400488!11759-123H4;0.258196!11761-123H6;0.0295107!11842-124H6;0.327716!11837-124H1;0.0498053!10568-108B1;0.144015!13230-141I8;0.512027!13231-141I9;0.241792!10696-109G3;0.285472!10493-107B7;0.631574!10494-107B8;0.497591!10850-111F4;0.73755!10851-111F5;0.990335!10852-111F6;0.71965!10853-111F7;0.557264!10854-111F8;0.647802!10855-111F9;0.70699!10856-111G1;0.377804!10847-111F1;0.899905!10846-111E9;0.520035!10848-111F2;0.67398!10845-111E8;0.703233!10857-111G2;0.983818!10858-111G3;0.646345!10156-103A3;0.967581!11901-125F2;0.845816!11902-125F3;0.0568475!11903-125F4;0.143196!10689-109F5;0.264357!10648-109A9;0.286997!10784-110H1;0.914436!10744-110C6;0.903223!10772-110F7;0.478221!10474-106I6;0.436282!10600-108E6;0.749411!10684-109E9;0.676046!12226-129F3;0.132314!12227-129F4;0.625411!10508-107D4;0.868248!10539-107G8;0.612992!10607-108F4;0.762306!10555-107I6;0.885518!10774-110F9;0.652942!10637-108I7;0.954743!10663-109C6;0.694293!10728-110A8;0.584008!10729-110A9;0.918501!10430-106D7;0.488169!10730-110B1;0.463481!10813-111B3;0.580188!10812-111B2;0.598114!10037-101F1;0.834755!10172-103C1;0.831699!10163-103B1;0.630975!10076-102A4;0.889002!10073-102A1;0.771252!10036-101E9;0.940585!10195-103E6;0.715579!10277-104E7;0.803072!10434-106E2;0.981331!10550-107I1;0.682694!10545-107H5;0.4067!10544-107H4;0.607449!10704-109H2;0.816346!10510-107D6;0.213124!10558-107I9;0.878038!10020-101D2;0.26294!10732-110B3;0.627405!10049-101G4;0.772026!10698-109G5;0.830162!10437-106E5;0.990571!10417-106C3;0.76951!10035-101E8;0.965415!10171-103B9;0.774429!10157-103A4;0.777646!10034-101E7;0.836966!10072-101I9;0.771769!10199-103F1;0.936705!10200-103F2;0.657943!10697-109G4;0.965222!10723-110A3;0.855517!10179-103C8;0.74886!10160-103A7;0.838917!10180-103C9;0.705566!10162-103A9;0.65229!10021-101D3;0.788072!10840-111E3;0.510502!10706-109H4;0.165986!10033-101E6;0.997074!10032-101E5;0.77193!10490-107B4;0.733779!10439-106E7;0.952875!10022-101D4;0.965285!10176-103C5;0.705616!10469-106I1;0.90914!10067-101I4;0.676576!10411-106B6;0.647619!10471-106I3;0.788917!10030-101E3;0.827415!10475-106I7;0.655911!10787-110H4;0.739946!10477-106I9;0.750607!10695-109G2;0.865728!11771-123I7;0.707674!11772-123I8;0.545997!11773-123I9;0.112453!10093-102C3;0.294847!10442-106F1;0.750466!10442-106F1;0.227272!10201-103F3;0.180659!10639-108I9;0.875802!11843-124H7;0.774464!11841-124H5;0.729125!10693-109F9;0.772492!10436-106E4;0.23492!10483-107A6;0.449468!10282-104F3;0.553788!10023-101D5;0.262617!10066-101I3;0.557387!10065-101I2;0.960109!10800-110I8;0.948822!10610-108F7;0.455268!10841-111E4;0.429276!10541-107H1;0.887422!10842-111E5;0.807466!10562-108A4;0.761545!10024-101D6;0.99424!10064-101I1;0.658356!10609-108F6;0.47987!10048-101G3;0.786058!10781-110G7;0.601235!10181-103D1;0.62052!10159-103A6;0.836003!10056-101H2;0.749105!10737-110B8;0.934879!10025-101D7;0.556211!10044-101F8;0.296252!10424-106D1;0.561993!10463-106H4;0.385272!10616-108G4;0.446611!10486-107A9;0.459256!10062-101H8;0.966319!10202-103F4;0.676033!10158-103A5;0.833964!10441-106E9;0.8083!10031-101E4;0.976093!10063-101H9;0.76608!10063-101H9;0.930693!11763-123H8;0.771476!11765-123I1;0.40681!11768-123I4;0.69786!10807-111A6;0.332301!10790-110H7;0.745611!10798-110I6;0.896167!10786-110H3;0.565388!10591-108D6;0.887889!10593-108D8;0.927658!10590-108D5;0.954481!10026-101D8;0.904552!10096-102C6;0.953646!10168-103B6;0.0648601!10154-103A1;0.762669!10209-103G2;0.826029!10061-101H7;0.912748!10027-101D9;0.971015!10043-101F7;0.763952!10783-110G9;0.992606!10028-101E1;0.501256!10060-101H6;0.824309!10203-103F5;0.934671!10059-101H5;0.888573!10047-101G2;0.867917!10029-101E2;0.865814!10058-101H4;0.879031!10418-106C4;0.902851!10492-107B6;0.839075!10694-109G1;0.842626!10797-110I5;0.444382!10057-101H3;0.873936!10100-102D1;0.906733!10055-101H1;0.496403!10204-103F6;0.607286!10191-103E2;0.88126!10563-108A5;0.866988
|name=motif_CNGGAT
|name=motif_CNGGAT
|tomtom_result=ASG1#MA0275.1;0;0.00198585;0.945265;1;6;CAGGAT;CCGGAA;+!DAL81#MA0290.1;12;0.00461462;2.19656;1;6;CAGGAT;AAAAGCCGCGGGCGGGATT;+!ECM22#MA0292.1;1;0.00462138;2.19978;1;6;CAGGAT;TCCGGAG;-!CAT8#MA0280.1;0;0.00534093;2.54228;1;6;CAGGAT;CCGGAA;+!ttk#MA0460.1;0;0.00873073;4.15583;1;6;CAGGAT;AAGGATAAT;+!ASH1#MA0276.1;0;0.00929282;4.42338;1;6;CAGGAT;CCGGATCGGG;+!YER184C#MA0424.1;2;0.0100056;4.76268;1;6;CAGGAT;TTCCGGAG;-!Tcfcp2l1#MA0145.1;0;0.0142276;6.77232;1;6;CAGGAT;CTGGTTTGAACTGG;-!PUT3#MA0358.1;2;0.0173765;8.27123;1;6;CAGGAT;CCCGGGAA;+!ETS1#MA0098.1;-1;0.0208612;9.92995;1;5;CAGGAT;CGGAAA;-
}}
}}

Latest revision as of 13:34, 7 September 2012

Full Name: motif_CNGGAT

Motif matrix
POACGT
010860800
022152215221522152
030086080
040086080
058608000
060008608

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ASG1#MA0275.100.001985850.94526516CAGGATCCGGAA+
DAL81#MA0290.1120.004614622.1965616CAGGATAAAAGCCGCGGGCGGGATT+
ECM22#MA0292.110.004621382.1997816CAGGATTCCGGAG-
CAT8#MA0280.100.005340932.5422816CAGGATCCGGAA+
ttk#MA0460.100.008730734.1558316CAGGATAAGGATAAT+
ASH1#MA0276.100.009292824.4233816CAGGATCCGGATCGGG+
YER184C#MA0424.120.01000564.7626816CAGGATTTCCGGAG-
Tcfcp2l1#MA0145.100.01422766.7723216CAGGATCTGGTTTGAACTGG-
PUT3#MA0358.120.01737658.2712316CAGGATCCCGGGAA+
ETS1#MA0098.1-10.02086129.9299515CAGGATCGGAAA-
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