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MacroAPE 1083:TBP: Difference between revisions

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0.178264!11441-118I1;1.94466e-10!10007-101B4;7.04735e-07!11520-119H8;0.000212071!11600-120H7;7.98482e-05!11681-122H7;6.64117e-07!11216-116B1;1.0471e-05!12179-129A1;0.864085!12180-129A2;0.000177664!12181-129A3;1.49472e-05!12176-128I7;0.000329077!12177-128I8;1.63358e-05!12182-129A4;4.51463e-05!12183-129A5;0.000134526!12184-129A6;0.000174101!10809-111A8;0.000539242!10597-108E3;0.927065!10717-109I6;0.060162!10455-106G5;0.180802!10534-107G3;0.00062561!10429-106D6;6.66718e-05!10464-106H5;0.000644655!10827-111C8;0.0014144!10789-110H6;3.34308e-06!10828-111C9;0.000185534!10788-110H5;0.00106339!10792-110H9;0.000311542!10765-110E9;6.33503e-07!10829-111D1;2.14941e-05!10830-111D2;0.000203268!10831-111D3;3.62719e-05!10832-111D4;0.00191338!10833-111D5;4.35897e-05!10764-110E8;0.000241952!10770-110F5;0.0315231!10399-106A3;0.000156984!10400-106A4;0.00173191!10405-106A9;0.000169889!10834-111D6;0.00456286!10835-111D7;5.86055e-06!10836-111D8;0.0190358!10837-111D9;9.08543e-05!10699-109G6;7.07785e-05!10802-111A1;1.35093e-06!10796-110I4;4.80182e-06!10010-101C1;0.658505!10810-111A9;0.00526244!10421-106C7;0.00533765!10708-109H6;0.000318119!12235-129G3;0.990842!12236-129G4;3.27871e-08!12237-129G5;0.0234558!10167-103B5;0.000536104!10151-102I7;0.594387!10428-106D5;0.0348437!10795-110I3;0.0307274!10805-111A4;0.00604284!10052-101G7;0.809002!10189-103D9;2.7512e-05!10589-108D4;0.157963!10425-106D2;0.172327!10427-106D4;0.153361!10702-109G9;0.198304!10432-106D9;0.658544!10496-107C1;0.109963!10718-109I7;0.23684!10011-101C2;0.00136517!10053-101G8;0.00035529!10686-109F2;0.108714!10084-102B3;0.777796!10012-101C3;0.828779!10085-102B4;0.0833971!10482-107A5;0.371197!10419-106C5;0.508626!10080-102A8;0.4029!10760-110E4;0.000340007!10709-109H7;0.560422!10710-109H8;0.0522273!10703-109H1;0.232947!10719-109I8;0.24985!10642-109A3;0.680543!10177-103C6;0.364588!10164-103B2;0.128967!10173-103C2;0.000782218!10166-103B4;0.00233799!10083-102B2;0.00136603!10188-103D8;0.0704785!10552-107I3;0.317859!10553-107I4;0.0780294!10013-101C4;0.0140539!10536-107G5;0.162289!10618-108G6;0.122433!10423-106C9;0.728063!10785-110H2;0.912796!12238-129G6;0.915104!12239-129G7;4.4493e-15!12240-129G8;0.0284248!10416-106C2;4.98342e-07!10801-110I9;0.0408056!10766-110F1;0.000119459!10824-111C5;7.11539e-05!10825-111C6;0.0117791!10826-111C7;0.0231616!10454-106G4;0.0289012!10409-106B4;0.0155946!10638-108I8;0.0164757!10636-108I6;0.650698!10513-107D9;2.44955e-05!10420-106C6;0.211974!10082-102B1;0.000186459!10014-101C5;0.000989153!10070-101I7;0.0172333!10452-106G2;0.000927309!10453-106G3;0.263389!10449-106F8;0.431704!10042-101F6;0.256483!10069-101I6;0.283452!10193-103E4;1.19751e-06!10631-108I1;0.0852378!10438-106E6;0.0505404!10488-107B2;0.961313!10196-103E7;0.845366!10071-101I8;0.932758!10071-101I8;0.000852976!10041-101F5;0.538917!10451-106G1;0.499907!10450-106F9;2.56913e-06!10604-108F1;0.663581!10605-108F2;0.372862!10606-108F3;0.613189!10603-108E9;0.575343!10497-107C2;0.0869091!10448-106F7;0.31446!10643-109A4;0.0520695!10426-106D3;0.467803!10431-106D8;0.141728!10197-103E8;0.0774943!10443-106F2;0.00779807!10815-111B5;0.35468!10816-111B6;0.451903!10817-111B7;0.194128!10015-101C6;0.860869!10410-106B5;4.19312e-05!10054-101G9;0.465493!10758-110E2;0.000354712!10711-109H9;0.0206493!10040-101F4;0.680312!10470-106I2;0.00475546!10415-106C1;0.486988!10198-103E9;0.509479!10614-108G2;0.00035849!10612-108F9;0.0438357!10549-107H9;0.672893!10615-108G3;0.0747565!10487-107B1;0.693184!10433-106E1;0.939962!10688-109F4;0.465427!10444-106F3;0.342819!10444-106F3;0.0138673!10485-107A8;0.0167844!10413-106B8;0.570783!10175-103C4;0.359842!10161-103A8;0.160783!12131-128D7;0.00467544!10624-108H3;1.83755e-13!10712-109I1;0.627951!10205-103F7;0.0797695!10206-103F8;9.40807e-05!10207-103F9;0.081914!10050-101G5;6.11118e-07!10051-101G6;1.40584e-08!10016-101C7;0.00110435!10046-101G1;0.000812086!10778-110G4;5.86988e-05!10633-108I3;0.187003!10818-111B8;0.00642431!10819-111B9;0.768823!10820-111C1;0.875247!10484-107A7;0.882303!10808-111A7;0.310655!10169-103B7;0.0196086!10153-102I9;0.165652!13425-144D5;0.0255672!13433-144E4;0.00074341!13437-144E8;0.00565694!11904-125F5;0.00535729!11905-125F6;0.494335!10039-101F3;3.93109e-05!10791-110H8;0.019582!10017-101C8;0.0730122!10045-101F9;0.710366!10509-107D5;0.0238232!10839-111E2;0.176327!10692-109F8;0.705917!10079-102A7;0.000807348!10078-102A6;0.0070031!10721-110A1;0.000532856!10569-108B2;0.551133!10570-108B3;0.670837!10571-108B4;0.75311!10647-109A8;0.781007!10752-110D5;0.137644!10782-110G8;0.213317!10726-110A6;0.277735!10018-101C9;0.745714!10086-102B5;0.182839!10182-103D2;2.94081e-14!10165-103B3;0.409449!10499-107C4;0.107663!10408-106B3;0.944937!10019-101D1;0.0186121!10068-101I5;0.110855!10075-102A3;0.539033!10077-102A5;0.880796!10727-110A7;0.674463!10775-110G1;0.0850372!10412-106B7;5.24375e-05!12231-129F8;0.39203!12232-129F9;1.49881e-05!12233-129G1;0.00103761!12234-129G2;0.000644128!10414-106B9;0.00451674!10170-103B8;0.00478575!10183-103D3;0.0454753!10150-102I6;0.0175009!10174-103C3;0.00448665!10155-103A2;0.462773!10038-101F2;0.196815!10838-111E1;0.771097!10759-110E3;0.858018!10514-107E1;0.310026!10465-106H6;0.532406!10691-109F7;0.0231964!10843-111E6;0.00310259!10844-111E7;0.00679465!11747-123G1;0.286139!11748-123G2;0.390085!11749-123G3;0.152104!11750-123G4;0.422811!11751-123G5;0.37076!11840-124H4;0.303004!11752-123G6;0.0378711!11753-123G7;0.120653!11754-123G8;0.116948!11755-123G9;0.528275!11756-123H1;0.530008!11833-124G6;0.252283!11760-123H5;0.325524!11836-124G9;0.0945142!11758-123H3;0.685922!11835-124G8;0.966107!11762-123H7;0.0415033!11838-124H2;0.0983482!11757-123H2;0.0169819!11759-123H4;0.421961!11761-123H6;0.198686!11842-124H6;0.0425668!11837-124H1;0.0500176!10568-108B1;0.0425024!13230-141I8;0.171684!13231-141I9;0.194355!10696-109G3;0.105407!10493-107B7;0.95953!10494-107B8;0.302686!10850-111F4;0.326143!10851-111F5;2.05232e-06!10852-111F6;0.319909!10853-111F7;0.844748!10854-111F8;0.0910687!10855-111F9;0.494622!10856-111G1;0.0218164!10847-111F1;0.331465!10846-111E9;0.392435!10848-111F2;0.000584216!10845-111E8;0.747674!10857-111G2;0.03753!10858-111G3;0.631974!10156-103A3;0.0731597!11901-125F2;0.0015886!11902-125F3;0.0309526!11903-125F4;0.00647224!10689-109F5;0.000320569!10648-109A9;0.99612!10784-110H1;0.000185215!10744-110C6;0.0672992!10772-110F7;0.273957!10474-106I6;0.00100368!10600-108E6;5.51255e-05!10684-109E9;0.506823!12226-129F3;0.190946!12227-129F4;0.0845222!10508-107D4;0.00800741!10539-107G8;0.0331793!10607-108F4;0.0426235!10555-107I6;0.430102!10774-110F9;0.729238!10637-108I7;0.177294!10663-109C6;0.385027!10728-110A8;0.109499!10729-110A9;0.733268!10430-106D7;0.0887902!10730-110B1;0.002521!10813-111B3;0.198349!10812-111B2;0.0172091!10037-101F1;0.6323!10172-103C1;0.0281942!10163-103B1;0.0143726!10076-102A4;0.00362485!10073-102A1;0.11747!10036-101E9;0.0774261!10195-103E6;0.100887!10277-104E7;0.0145471!10434-106E2;0.807326!10550-107I1;0.0181902!10545-107H5;0.751426!10544-107H4;0.699179!10704-109H2;8.5128e-05!10510-107D6;0.935721!10558-107I9;0.355025!10020-101D2;0.496971!10732-110B3;0.0262788!10049-101G4;0.135479!10698-109G5;0.23483!10437-106E5;0.335985!10417-106C3;0.312955!10035-101E8;0.0306913!10171-103B9;0.0265225!10157-103A4;0.0918105!10034-101E7;0.00349266!10072-101I9;0.0388988!10199-103F1;0.0333569!10200-103F2;0.855409!10697-109G4;0.00142203!10723-110A3;0.343786!10179-103C8;0.590652!10160-103A7;0.148677!10180-103C9;1.24624e-05!10162-103A9;0.139016!10021-101D3;0.00185827!10840-111E3;0.00577878!10706-109H4;0.0857369!10033-101E6;0.203864!10032-101E5;0.0412725!10490-107B4;0.0781215!10439-106E7;0.496086!10022-101D4;0.870588!10176-103C5;0.0871506!10469-106I1;0.00100237!10067-101I4;0.123824!10411-106B6;0.292398!10471-106I3;0.722257!10030-101E3;0.0609027!10475-106I7;0.701391!10787-110H4;0.00291326!10477-106I9;0.206234!10695-109G2;0.949905!11771-123I7;0.00494405!11772-123I8;0.887628!11773-123I9;0.357618!10093-102C3;0.125338!10442-106F1;0.948848!10442-106F1;0.0148331!10201-103F3;0.0184906!10639-108I9;0.438475!11843-124H7;1.62411e-05!11841-124H5;4.86743e-05!10693-109F9;0.624274!10436-106E4;0.00069446!10483-107A6;0.323204!10282-104F3;0.225343!10023-101D5;0.00331852!10066-101I3;2.4312e-06!10065-101I2;6.63224e-10!10800-110I8;2.40821e-05!10610-108F7;0.937159!10841-111E4;0.528428!10541-107H1;0.553484!10842-111E5;0.302047!10562-108A4;0.13931!10024-101D6;0.140707!10064-101I1;0.317066!10609-108F6;0.118263!10048-101G3;0.535304!10781-110G7;0.188678!10181-103D1;0.0116397!10159-103A6;0.713503!10056-101H2;0.040526!10737-110B8;0.0564916!10025-101D7;0.0439316!10044-101F8;0.0926678!10424-106D1;0.17072!10463-106H4;0.00232046!10616-108G4;0.44911!10486-107A9;0.0196317!10062-101H8;0.00274183!10202-103F4;3.20481e-05!10158-103A5;0.687902!10441-106E9;0.0633541!10031-101E4;0.316437!10063-101H9;0.254972!10063-101H9;0.267587!11763-123H8;0.106105!11765-123I1;0.546043!11768-123I4;0.175495!10807-111A6;0.0586839!10790-110H7;0.945842!10798-110I6;0.219055!10786-110H3;0.948698!10591-108D6;0.0339055!10593-108D8;0.756757!10590-108D5;0.373455!10026-101D8;0.199968!10096-102C6;0.00440787!10168-103B6;0.956602!10154-103A1;0.108376!10209-103G2;0.00825943!10061-101H7;8.85023e-05!10027-101D9;0.00576961!10043-101F7;0.181344!10783-110G9;0.102552!10028-101E1;0.495162!10060-101H6;0.720283!10203-103F5;0.0104789!10059-101H5;4.15867e-07!10047-101G2;1.11231e-10!10029-101E2;0.0443772!10058-101H4;7.18609e-08!10418-106C4;3.73842e-06!10492-107B6;0.103187!10694-109G1;0.0460484!10797-110I5;0.0705882!10057-101H3;0.836164!10100-102D1;1.80282e-10!10055-101H1;0.909742!10204-103F6;0.0776147!10191-103E2;0.127513!10563-108A5;0.00288646
|name=TBP
|name=TBP
|tomtom_result=TBP#MA0386.1;0;9.11881e-24;4.34055e-21;4.29229e-21;15;CTATAAAAGGCGCGG;GTATAAAAGGCGGGG;+!TBP#MA0386.1;0;9.11881e-24;4.34055e-21;4.29229e-21;15;CTATAAAAGGCGCGG;GTATAAAAGGCGGGG;+!NHP6A#MA0345.1;6;0.000420567;0.20019;0.113775;15;CTATAAAAGGCGCGG;TCATTTTTATATATAGGTCAT;-!MEF2A#MA0052.1;0;0.000517845;0.246494;0.113775;10;CTATAAAAGGCGCGG;CTATAAATAG;-!NHP6B#MA0346.1;7;0.000604276;0.287635;0.113775;13;CTATAAAAGGCGCGG;TTTATTTATATATAATATGA;+!RLM1#MA0369.1;4;0.00168702;0.803023;0.198523;14;CTATAAAAGGCGCGG;GGTTCTATAAATAGATCC;+!squamosa#MA0082.1;0;0.00206856;0.984634;0.216374;14;CTATAAAAGGCGCGG;CCAAAAATGGAAAT;+!AGL3#MA0001.1;0;0.00239664;1.1408;0.225623;10;CTATAAAAGGCGCGG;CTATTTATGG;-!TBP#MA0386.1;6;0.00277581;1.32128;0.237562;15;CTATAAAAGGCGCGG;GACTAGATATATATATTCGAT;+!HMG-I/Y#MA0045.1;0;0.00490148;2.33311;0.384527;15;CTATAAAAGGCGCGG;CAACAAATGGAAAAAC;+!pan#MA0237.1;-1;0.0073434;3.49546;0.431199;8;CTATAAAAGGCGCGG;GATCAAAG;-!FKH1#MA0296.1;6;0.00774957;3.6888;0.431199;14;CTATAAAAGGCGCGG;TGAATTGTAAACAAAGAGGA;+!Cf2_II#MA0015.1;0;0.00778656;3.7064;0.431199;10;CTATAAAAGGCGCGG;GTATATATAC;+!SMP1#MA0383.1;4;0.00851791;4.05452;0.445493;15;CTATAAAAGGCGCGG;TTACCTATAATTAAATTAGCA;+!hb#MA0049.1;0;0.00941849;4.4832;0.460249;10;CTATAAAAGGCGCGG;GCATAAAAAA;+!NDT80#MA0343.1;7;0.00977782;4.65424;0.460249;14;CTATAAAAGGCGCGG;TTTCCGGCCACAAAAACGCAA;+!cad#MA0216.1;0;0.0123989;5.90187;0.530567;7;CTATAAAAGGCGCGG;CAATAAA;-!Abd-B#MA0165.1;0;0.0157517;7.49779;0.644732;7;CTATAAAAGGCGCGG;TCATAAA;-!Hltf#MA0109.1;-2;0.0177358;8.44224;0.675209;10;CTATAAAAGGCGCGG;ATATAAGGTT;-!ARID3A#MA0151.1;-2;0.0179307;8.53502;0.675209;6;CTATAAAAGGCGCGG;ATTAAA;+!SIG1#MA0379.1;-2;0.0193748;9.22238;0.689992;5;CTATAAAAGGCGCGG;ATATA;+!PHO2#MA0356.1;-2;0.0197891;9.41963;0.689992;6;CTATAAAAGGCGCGG;ATAATA;+
}}
}}

Latest revision as of 13:34, 7 September 2012

Full Name: TBP

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TBP#MA0386.109.11881e-244.34055e-214.29229e-2115CTATAAAAGGCGCGGGTATAAAAGGCGGGG+
TBP#MA0386.109.11881e-244.34055e-214.29229e-2115CTATAAAAGGCGCGGGTATAAAAGGCGGGG+
NHP6A#MA0345.160.0004205670.200190.11377515CTATAAAAGGCGCGGTCATTTTTATATATAGGTCAT-
MEF2A#MA0052.100.0005178450.2464940.11377510CTATAAAAGGCGCGGCTATAAATAG-
NHP6B#MA0346.170.0006042760.2876350.11377513CTATAAAAGGCGCGGTTTATTTATATATAATATGA+
RLM1#MA0369.140.001687020.8030230.19852314CTATAAAAGGCGCGGGGTTCTATAAATAGATCC+
squamosa#MA0082.100.002068560.9846340.21637414CTATAAAAGGCGCGGCCAAAAATGGAAAT+
AGL3#MA0001.100.002396641.14080.22562310CTATAAAAGGCGCGGCTATTTATGG-
TBP#MA0386.160.002775811.321280.23756215CTATAAAAGGCGCGGGACTAGATATATATATTCGAT+
HMG-I/Y#MA0045.100.004901482.333110.38452715CTATAAAAGGCGCGGCAACAAATGGAAAAAC+
pan#MA0237.1-10.00734343.495460.4311998CTATAAAAGGCGCGGGATCAAAG-
FKH1#MA0296.160.007749573.68880.43119914CTATAAAAGGCGCGGTGAATTGTAAACAAAGAGGA+
Cf2_II#MA0015.100.007786563.70640.43119910CTATAAAAGGCGCGGGTATATATAC+
SMP1#MA0383.140.008517914.054520.44549315CTATAAAAGGCGCGGTTACCTATAATTAAATTAGCA+
hb#MA0049.100.009418494.48320.46024910CTATAAAAGGCGCGGGCATAAAAAA+
NDT80#MA0343.170.009777824.654240.46024914CTATAAAAGGCGCGGTTTCCGGCCACAAAAACGCAA+
cad#MA0216.100.01239895.901870.5305677CTATAAAAGGCGCGGCAATAAA-
Abd-B#MA0165.100.01575177.497790.6447327CTATAAAAGGCGCGGTCATAAA-
Hltf#MA0109.1-20.01773588.442240.67520910CTATAAAAGGCGCGGATATAAGGTT-
ARID3A#MA0151.1-20.01793078.535020.6752096CTATAAAAGGCGCGGATTAAA+
SIG1#MA0379.1-20.01937489.222380.6899925CTATAAAAGGCGCGGATATA+
PHO2#MA0356.1-20.01978919.419630.6899926CTATAAAAGGCGCGGATAATA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:TBP&oldid=2134051"