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MacroAPE 1083:TACCGGT,motif604: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.765;0.765;0.765;762.705!2;646.425;0.765;0.765;117.045!3;0.765;762.705;0.765;0.765!4;0.765;762.705;0.765;0.765!5;0.765;0.765;592.875;170.59...")
 
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1600-120H7;0.857254!11681-122H7;0.594782!11216-116B1;0.56577!12179-129A1;0.232081!12180-129A2;0.000131924!12181-129A3;0.000172111!12176-128I7;0.00108057!12177-128I8;0.000269284!12182-129A4;0.000181807!12183-129A5;0.000532591!12184-129A6;0.000138984!10809-111A8;0.000309646!10597-108E3;0.607237!10717-109I6;0.417655!10455-106G5;0.187512!10534-107G3;8.81292e-07!10429-106D6;0.00510482!10464-106H5;6.68167e-05!10827-111C8;0.000149756!10789-110H6;1.5906e-05!10828-111C9;6.46738e-07!10788-110H5;3.82402e-05!10792-110H9;0.00497753!10765-110E9;0.00227447!10829-111D1;0.000507469!10830-111D2;0.000166456!10831-111D3;0.000249132!10832-111D4;5.11185e-05!10833-111D5;1.71771e-05!10764-110E8;0.00031075!10770-110F5;0.00666405!10399-106A3;0.000668844!10400-106A4;0.0117178!10405-106A9;0.00851541!10834-111D6;0.0239514!10835-111D7;1.39713e-05!10836-111D8;0.0389261!10837-111D9;0.084772!10699-109G6;4.58007e-06!10802-111A1;0.000740347!10796-110I4;0.00043744!10010-101C1;0.834409!10810-111A9;0.195734!10421-106C7;0.931485!10708-109H6;2.30991e-06!12235-129G3;0.180551!12236-129G4;0.991008!12237-129G5;0.280497!10167-103B5;0.660991!10151-102I7;0.0201487!10428-106D5;0.0100083!10795-110I3;0.392064!10805-111A4;0.00755738!10052-101G7;0.338246!10189-103D9;0.0325054!10589-108D4;0.418516!10425-106D2;0.985218!10427-106D4;0.136135!10702-109G9;0.000309603!10432-106D9;0.0379673!10496-107C1;0.349935!10718-109I7;0.657475!10011-101C2;0.000344756!10053-101G8;0.0885785!10686-109F2;0.00158239!10084-102B3;0.0107127!10012-101C3;0.00683545!10085-102B4;0.0153168!10482-107A5;0.00100533!10419-106C5;0.990373!10080-102A8;0.679211!10760-110E4;0.0235116!10709-109H7;0.595395!10710-109H8;0.877522!10703-109H1;0.905913!10719-109I8;0.202002!10642-109A3;0.190257!10177-103C6;0.0484803!10164-103B2;0.00951769!10173-103C2;0.0343382!10166-103B4;0.0118739!10083-102B2;0.00381926!10188-103D8;0.00998972!10552-107I3;0.00672203!10553-107I4;0.771014!10013-101C4;0.409941!10536-107G5;0.0330948!10618-108G6;0.667566!10423-106C9;0.264332!10785-110H2;0.351443!12238-129G6;0.90855!12239-129G7;0.97262!12240-129G8;0.13477!10416-106C2;0.376537!10801-110I9;5.18348e-06!10766-110F1;0.000213768!10824-111C5;2.18026e-06!10825-111C6;0.25932!10826-111C7;0.333482!10454-106G4;0.146567!10409-106B4;0.346246!10638-108I8;0.000261492!10636-108I6;0.740707!10513-107D9;0.369905!10420-106C6;0.901508!10082-102B1;0.815426!10014-101C5;0.340529!10070-101I7;0.238605!10452-106G2;0.0583899!10453-106G3;0.488115!10449-106F8;0.173575!10042-101F6;0.0850596!10069-101I6;0.0123522!10193-103E4;0.0206995!10631-108I1;0.039966!10438-106E6;0.00324427!10488-107B2;0.826843!10196-103E7;0.774669!10071-101I8;0.0220284!10071-101I8;0.382781!10041-101F5;0.00386169!10451-106G1;0.382014!10450-106F9;0.4356!10604-108F1;0.55892!10605-108F2;0.719513!10606-108F3;0.993265!10603-108E9;0.808448!10497-107C2;0.907587!10448-106F7;0.495172!10643-109A4;0.778292!10426-106D3;0.669434!10431-106D8;0.803327!10197-103E8;0.848719!10443-106F2;0.0900838!10815-111B5;0.192784!10816-111B6;0.71834!10817-111B7;0.952761!10015-101C6;0.668514!10410-106B5;0.448335!10054-101G9;0.744449!10758-110E2;0.00225147!10711-109H9;0.770034!10040-101F4;0.335908!10470-106I2;0.0146773!10415-106C1;0.712863!10198-103E9;0.847035!10614-108G2;0.141774!10612-108F9;0.593575!10549-107H9;0.35167!10615-108G3;0.666352!10487-107B1;0.395375!10433-106E1;0.231508!10688-109F4;0.979817!10444-106F3;0.683985!10444-106F3;0.356916!10485-107A8;0.200326!10413-106B8;0.403562!10175-103C4;0.276338!10161-103A8;0.0165264!12131-128D7;0.0407681!10624-108H3;0.0588375!10712-109I1;0.00291458!10205-103F7;0.00155354!10206-103F8;0.00898219!10207-103F9;0.0128071!10050-101G5;0.262121!10051-101G6;0.0348644!10016-101C7;0.0985135!10046-101G1;0.254858!10778-110G4;0.0136711!10633-108I3;0.129995!10818-111B8;0.069166!10819-111B9;0.609787!10820-111C1;0.621648!10484-107A7;0.694886!10808-111A7;0.508175!10169-103B7;0.000118845!10153-102I9;0.0244717!13425-144D5;0.00773407!13433-144E4;0.0828597!13437-144E8;0.205414!11904-125F5;0.30585!11905-125F6;0.0320734!10039-101F3;0.198057!10791-110H8;0.00779254!10017-101C8;0.718737!10045-101F9;0.527118!10509-107D5;0.0275295!10839-111E2;0.631409!10692-109F8;0.568999!10079-102A7;0.183814!10078-102A6;0.1819!10721-110A1;0.380165!10569-108B2;0.854257!10570-108B3;0.0313976!10571-108B4;0.123362!10647-109A8;0.0254093!10752-110D5;0.276268!10782-110G8;0.019144!10726-110A6;0.0496043!10018-101C9;0.139851!10086-102B5;0.229185!10182-103D2;0.926654!10165-103B3;0.00605357!10499-107C4;0.0341365!10408-106B3;0.780991!10019-101D1;0.0375516!10068-101I5;0.682971!10075-102A3;0.170704!10077-102A5;0.915657!10727-110A7;0.0113376!10775-110G1;1.8155e-05!10412-106B7;7.61593e-05!12231-129F8;0.931881!12232-129F9;0.0176594!12233-129G1;0.0137349!12234-129G2;0.00695902!10414-106B9;0.042191!10170-103B8;0.711203!10183-103D3;0.0237821!10150-102I6;0.0121557!10174-103C3;0.00970889!10155-103A2;0.0220135!10038-101F2;0.00968067!10838-111E1;0.013445!10759-110E3;0.102025!10514-107E1;0.0352734!10465-106H6;0.709337!10691-109F7;0.428438!10843-111E6;0.642563!10844-111E7;0.334789!11747-123G1;0.201405!11748-123G2;0.162044!11749-123G3;0.0277629!11750-123G4;0.0961778!11751-123G5;0.00682685!11840-124H4;0.00490449!11752-123G6;0.0349262!11753-123G7;0.0796123!11754-123G8;0.0187214!11755-123G9;0.202198!11756-123H1;0.293179!11833-124G6;0.461405!11760-123H5;0.114536!11836-124G9;0.145976!11758-123H3;0.0813223!11835-124G8;0.175469!11762-123H7;0.0113702!11838-124H2;0.152556!11757-123H2;0.0597538!11759-123H4;0.258989!11761-123H6;0.086986!11842-124H6;0.116062!11837-124H1;0.0143606!10568-108B1;0.0309317!13230-141I8;0.124261!13231-141I9;0.0402918!10696-109G3;0.00940045!10493-107B7;0.0353526!10494-107B8;0.792918!10850-111F4;0.58557!10851-111F5;0.326341!10852-111F6;0.11956!10853-111F7;0.823617!10854-111F8;0.353788!10855-111F9;0.262066!10856-111G1;0.264445!10847-111F1;0.342444!10846-111E9;0.0867524!10848-111F2;0.917355!10845-111E8;0.468528!10857-111G2;0.974604!10858-111G3;0.755471!10156-103A3;0.17478!11901-125F2;0.00903887!11902-125F3;0.000893316!11903-125F4;0.000995308!10689-109F5;0.00060189!10648-109A9;0.11747!10784-110H1;0.133755!10744-110C6;0.4163!10772-110F7;0.000439823!10474-106I6;0.0104105!10600-108E6;0.00280945!10684-109E9;0.020113!12226-129F3;0.0164793!12227-129F4;0.315798!10508-107D4;0.0492272!10539-107G8;0.161674!10607-108F4;0.0784922!10555-107I6;0.494037!10774-110F9;0.155063!10637-108I7;0.808549!10663-109C6;0.110259!10728-110A8;0.439617!10729-110A9;0.294039!10430-106D7;0.0357192!10730-110B1;0.162758!10813-111B3;0.65553!10812-111B2;0.0145087!10037-101F1;0.0182532!10172-103C1;0.00980242!10163-103B1;0.019716!10076-102A4;0.00661335!10073-102A1;0.00831984!10036-101E9;0.00369499!10195-103E6;0.00617666!10277-104E7;0.00459841!10434-106E2;0.0265556!10550-107I1;0.757037!10545-107H5;0.959028!10544-107H4;0.50092!10704-109H2;0.655027!10510-107D6;0.0664933!10558-107I9;0.495905!10020-101D2;0.0511732!10732-110B3;0.00346715!10049-101G4;0.0982889!10698-109G5;0.966762!10437-106E5;0.212564!10417-106C3;0.262752!10035-101E8;0.806865!10171-103B9;0.00841527!10157-103A4;0.0178254!10034-101E7;0.0100295!10072-101I9;0.00957344!10199-103F1;0.00359939!10200-103F2;0.371273!10697-109G4;0.0507712!10723-110A3;0.234387!10179-103C8;0.602135!10160-103A7;0.037189!10180-103C9;0.0862062!10162-103A9;0.302609!10021-101D3;0.197051!10840-111E3;0.618258!10706-109H4;1.32933e-05!10033-101E6;0.605482!10032-101E5;0.0431949!10490-107B4;0.00732461!10439-106E7;0.646718!10022-101D4;0.567171!10176-103C5;0.0598573!10469-106I1;0.0320353!10067-101I4;0.581964!10411-106B6;0.00426633!10471-106I3;0.0103115!10030-101E3;0.617487!10475-106I7;0.0078242!10787-110H4;0.327176!10477-106I9;0.777426!10695-109G2;0.0912435!11771-123I7;0.00293829!11772-123I8;0.466827!11773-123I9;0.073207!10093-102C3;0.144733!10442-106F1;0.684073!10442-106F1;0.510818!10201-103F3;0.334632!10639-108I9;0.0447822!11843-124H7;0.184492!11841-124H5;0.0530644!10693-109F9;0.451893!10436-106E4;0.293707!10483-107A6;0.289134!10282-104F3;0.492997!10023-101D5;0.164252!10066-101I3;0.0627704!10065-101I2;0.0407899!10800-110I8;0.0231329!10610-108F7;0.181666!10841-111E4;0.233567!10541-107H1;0.396175!10842-111E5;0.520166!10562-108A4;0.172325!10024-101D6;0.964566!10064-101I1;0.822408!10609-108F6;0.368527!10048-101G3;0.79358!10781-110G7;0.00752146!10181-103D1;0.924162!10159-103A6;0.0106792!10056-101H2;0.0494725!10737-110B8;0.000459165!10025-101D7;0.010269!10044-101F8;0.047762!10424-106D1;0.363723!10463-106H4;0.000536871!10616-108G4;0.901998!10486-107A9;0.431335!10062-101H8;0.103178!10202-103F4;0.062911!10158-103A5;0.439831!10441-106E9;0.0736863!10031-101E4;0.0464394!10063-101H9;0.00429964!10063-101H9;0.00305065!11763-123H8;0.204619!11765-123I1;0.0227284!11768-123I4;0.0126744!10807-111A6;0.0592699!10790-110H7;0.35054!10798-110I6;0.849866!10786-110H3;0.535279!10591-108D6;0.313398!10593-108D8;0.870345!10590-108D5;0.516033!10026-101D8;0.608703!10096-102C6;0.000338768!10168-103B6;0.0141149!10154-103A1;0.0358045!10209-103G2;0.0287366!10061-101H7;0.425241!10027-101D9;0.148179!10043-101F7;1.38987e-06!10783-110G9;0.0053332!10028-101E1;0.11954!10060-101H6;0.584548!10203-103F5;0.117374!10059-101H5;0.285549!10047-101G2;0.0614475!10029-101E2;0.130441!10058-101H4;0.913217!10418-106C4;0.0264654!10492-107B6;0.334192!10694-109G1;0.388332!10797-110I5;0.00058396!10057-101H3;0.970708!10100-102D1;0.0315003!10055-101H1;0.0230051!10204-103F6;0.00371423!10191-103E2;0.116337!10563-108A5;0.517385
|name=TACCGGT,motif604,CNhs13202,T:765.0(29.00%),B:14894.1(19.60%),P:1e-30
|name=TACCGGT,motif604,CNhs13202,T:765.0(29.00%),B:14894.1(19.60%),P:1e-30
|tomtom_result=ELK4#MA0076.1;2;0.000929981;0.442671;0.61724;7;TACCGGT;ACTTCCGGT;-!GABPA#MA0062.1;3;0.00129672;0.61724;0.61724;7;TACCGGT;CTCTTCCGGT;-!YBR239C#MA0420.1;1;0.0027414;1.30491;0.869938;7;TACCGGT;GTTCCGGT;-!ELK1#MA0028.1;1;0.00690781;3.28812;1;7;TACCGGT;CTTCCGGCTC;-!Eip74EF#MA0026.1;1;0.00744857;3.54552;1;6;TACCGGT;CTTCCGG;-!ASG1#MA0275.1;0;0.00801356;3.81446;1;6;TACCGGT;TTCCGG;-!SPIB#MA0081.1;0;0.00941535;4.48171;1;7;TACCGGT;TTCCTCT;-!CAT8#MA0280.1;0;0.0107881;5.13512;1;6;TACCGGT;TTCCGG;-!LEU3#MA0324.1;4;0.0129248;6.15219;1;6;TACCGGT;CCGTTACCGG;+!myb.Ph3#MA0054.1;0;0.0135298;6.4402;1;7;TACCGGT;TAACCGTTT;+!LYS14#MA0325.1;2;0.0195695;9.31507;1;6;TACCGGT;AATTCCGG;-!odd#MA0454.1;4;0.020593;9.80229;1;7;TACCGGT;CTGCTACTGTT;-
}}
}}

Latest revision as of 13:37, 7 September 2012

Full Name: TACCGGT,motif604,CNhs13202,T:765.0(29.00%),B:14894.1(19.60%),P:1e-30

Motif matrix
POACGT
10.7650.7650.765762.705
2646.4250.7650.765117.045
30.765762.7050.7650.765
40.765762.7050.7650.765
50.7650.765592.875170.595
60.7650.765762.7050.765
70.7650.7650.765762.705

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ELK4#MA0076.120.0009299810.4426710.617247TACCGGTACTTCCGGT-
GABPA#MA0062.130.001296720.617240.617247TACCGGTCTCTTCCGGT-
YBR239C#MA0420.110.00274141.304910.8699387TACCGGTGTTCCGGT-
ELK1#MA0028.110.006907813.2881217TACCGGTCTTCCGGCTC-
Eip74EF#MA0026.110.007448573.5455216TACCGGTCTTCCGG-
ASG1#MA0275.100.008013563.8144616TACCGGTTTCCGG-
SPIB#MA0081.100.009415354.4817117TACCGGTTTCCTCT-
CAT8#MA0280.100.01078815.1351216TACCGGTTTCCGG-
LEU3#MA0324.140.01292486.1521916TACCGGTCCGTTACCGG+
myb.Ph3#MA0054.100.01352986.440217TACCGGTTAACCGTTT+
LYS14#MA0325.120.01956959.3150716TACCGGTAATTCCGG-
odd#MA0454.140.0205939.8022917TACCGGTCTGCTACTGTT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:TACCGGT,motif604&oldid=2134065"