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MacroAPE 1083:TFCP2L1 mES-Tfcp2l1-ChIP-Seq/Homer: Difference between revisions

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5!10828-111C9;0.904299!10788-110H5;0.966387!10792-110H9;0.667145!10765-110E9;0.401688!10829-111D1;0.379662!10830-111D2;0.237914!10831-111D3;0.353026!10832-111D4;0.492216!10833-111D5;0.480894!10764-110E8;0.729844!10770-110F5;0.503584!10399-106A3;0.933451!10400-106A4;0.788469!10405-106A9;0.963468!10834-111D6;0.819858!10835-111D7;0.369613!10836-111D8;0.772552!10837-111D9;0.343818!10699-109G6;0.594587!10802-111A1;0.35392!10796-110I4;0.177596!10010-101C1;0.678511!10810-111A9;0.345833!10421-106C7;0.0967868!10708-109H6;0.38426!12235-129G3;0.895861!12236-129G4;0.690807!12237-129G5;0.986344!10167-103B5;0.441364!10151-102I7;0.574723!10428-106D5;0.41521!10795-110I3;0.119773!10805-111A4;0.336424!10052-101G7;0.528206!10189-103D9;0.394773!10589-108D4;0.859104!10425-106D2;0.564403!10427-106D4;0.951349!10702-109G9;0.214634!10432-106D9;0.672774!10496-107C1;0.623856!10718-109I7;0.253195!10011-101C2;0.52116!10053-101G8;0.250747!10686-109F2;0.472219!10084-102B3;0.360227!10012-101C3;0.939403!10085-102B4;0.891196!10482-107A5;0.237961!10419-106C5;0.993923!10080-102A8;0.908076!10760-110E4;0.697784!10709-109H7;0.335047!10710-109H8;0.582787!10703-109H1;0.349202!10719-109I8;0.387467!10642-109A3;0.0279135!10177-103C6;0.173588!10164-103B2;0.97094!10173-103C2;0.193188!10166-103B4;0.189973!10083-102B2;0.0855736!10188-103D8;0.295893!10552-107I3;0.681801!10553-107I4;0.551345!10013-101C4;0.816746!10536-107G5;0.165298!10618-108G6;0.0865695!10423-106C9;0.881417!10785-110H2;0.226555!12238-129G6;0.372969!12239-129G7;0.227899!12240-129G8;0.0479327!10416-106C2;0.562333!10801-110I9;0.420531!10766-110F1;0.289079!10824-111C5;0.433429!10825-111C6;0.232998!10826-111C7;0.200057!10454-106G4;0.260128!10409-106B4;0.179303!10638-108I8;0.09044!10636-108I6;0.689039!10513-107D9;0.237535!10420-106C6;0.590087!10082-102B1;0.472264!10014-101C5;0.585167!10070-101I7;0.72327!10452-106G2;0.723511!10453-106G3;0.545734!10449-106F8;0.617205!10042-101F6;0.537448!10069-101I6;0.0939318!10193-103E4;0.58095!10631-108I1;0.732033!10438-106E6;0.386475!10488-107B2;0.979521!10196-103E7;0.861799!10071-101I8;0.40493!10071-101I8;0.407268!10041-101F5;0.342431!10451-106G1;0.0964076!10450-106F9;0.503435!10604-108F1;0.334329!10605-108F2;0.120726!10606-108F3;0.197563!10603-108E9;0.159734!10497-107C2;0.456555!10448-106F7;0.723255!10643-109A4;0.345331!10426-106D3;0.335113!10431-106D8;0.630919!10197-103E8;0.326911!10443-106F2;0.0654722!10815-111B5;0.563337!10816-111B6;0.520195!10817-111B7;0.530024!10015-101C6;0.460055!10410-106B5;0.0713487!10054-101G9;0.572053!10758-110E2;0.288285!10711-109H9;0.120851!10040-101F4;0.626979!10470-106I2;0.74217!10415-106C1;0.612223!10198-103E9;0.573561!10614-108G2;0.357258!10612-108F9;0.891029!10549-107H9;0.234401!10615-108G3;0.509613!10487-107B1;0.814961!10433-106E1;0.881551!10688-109F4;0.963894!10444-106F3;0.926499!10444-106F3;0.629251!10485-107A8;0.702662!10413-106B8;0.252482!10175-103C4;0.0975573!10161-103A8;0.762941!12131-128D7;0.823594!10624-108H3;0.153307!10712-109I1;0.0673157!10205-103F7;0.716736!10206-103F8;0.640433!10207-103F9;0.928167!10050-101G5;0.879088!10051-101G6;0.438671!10016-101C7;0.899696!10046-101G1;0.541773!10778-110G4;0.839484!10633-108I3;0.946127!10818-111B8;0.339556!10819-111B9;0.907836!10820-111C1;0.953089!10484-107A7;0.951009!10808-111A7;0.252697!10169-103B7;0.330259!10153-102I9;0.676803!13425-144D5;0.582966!13433-144E4;0.891677!13437-144E8;0.598515!11904-125F5;0.912877!11905-125F6;0.997593!10039-101F3;0.703728!10791-110H8;0.631691!10017-101C8;0.748194!10045-101F9;0.000634225!10509-107D5;0.00455148!10839-111E2;0.360072!10692-109F8;0.88179!10079-102A7;0.0275372!10078-102A6;0.795158!10721-110A1;0.989997!10569-108B2;0.131368!10570-108B3;0.601682!10571-108B4;0.174923!10647-109A8;0.101141!10752-110D5;0.148518!10782-110G8;0.57544!10726-110A6;0.878481!10018-101C9;0.480696!10086-102B5;0.929029!10182-103D2;0.885661!10165-103B3;0.965273!10499-107C4;0.846088!10408-106B3;0.118843!10019-101D1;0.730743!10068-101I5;0.147942!10075-102A3;0.374186!10077-102A5;0.332021!10727-110A7;0.616382!10775-110G1;0.191501!10412-106B7;0.50212!12231-129F8;0.713909!12232-129F9;0.459667!12233-129G1;0.691194!12234-129G2;0.427245!10414-106B9;0.673002!10170-103B8;0.999717!10183-103D3;0.416928!10150-102I6;0.674747!10174-103C3;0.379266!10155-103A2;0.0788739!10038-101F2;0.480363!10838-111E1;0.211498!10759-110E3;0.316312!10514-107E1;0.483117!10465-106H6;0.247028!10691-109F7;0.938532!10843-111E6;0.554613!10844-111E7;0.286168!11747-123G1;0.460217!11748-123G2;0.550906!11749-123G3;0.729328!11750-123G4;0.281667!11751-123G5;0.135989!11840-124H4;0.421451!11752-123G6;0.637702!11753-123G7;0.227412!11754-123G8;0.892571!11755-123G9;0.453524!11756-123H1;0.640886!11833-124G6;0.811002!11760-123H5;0.501162!11836-124G9;0.717909!11758-123H3;0.358588!11835-124G8;0.526744!11762-123H7;0.20291!11838-124H2;0.728472!11757-123H2;0.474745!11759-123H4;0.0910009!11761-123H6;0.738553!11842-124H6;0.711198!11837-124H1;0.757998!10568-108B1;0.423941!13230-141I8;0.887726!13231-141I9;0.469916!10696-109G3;0.478025!10493-107B7;0.923058!10494-107B8;0.0686389!10850-111F4;0.1669!10851-111F5;0.830814!10852-111F6;0.228932!10853-111F7;0.787007!10854-111F8;0.181148!10855-111F9;0.145508!10856-111G1;0.115993!10847-111F1;0.699756!10846-111E9;0.915533!10848-111F2;0.981216!10845-111E8;0.506564!10857-111G2;0.209032!10858-111G3;0.913633!10156-103A3;0.59558!11901-125F2;0.394893!11902-125F3;0.680996!11903-125F4;0.667449!10689-109F5;0.484969!10648-109A9;0.0936204!10784-110H1;0.611542!10744-110C6;0.594397!10772-110F7;0.327815!10474-106I6;0.412589!10600-108E6;0.543926!10684-109E9;0.0183833!12226-129F3;0.53454!12227-129F4;0.0644297!10508-107D4;0.568906!10539-107G8;0.324152!10607-108F4;0.89325!10555-107I6;0.07278!10774-110F9;0.437099!10637-108I7;0.00126069!10663-109C6;0.0146267!10728-110A8;0.00288903!10729-110A9;0.000718813!10430-106D7;0.770835!10730-110B1;0.128667!10813-111B3;0.69421!10812-111B2;0.239218!10037-101F1;0.326315!10172-103C1;0.837906!10163-103B1;0.351759!10076-102A4;0.508826!10073-102A1;0.603081!10036-101E9;0.287388!10195-103E6;0.682377!10277-104E7;0.645585!10434-106E2;0.107589!10550-107I1;0.971525!10545-107H5;0.123903!10544-107H4;0.982594!10704-109H2;0.61626!10510-107D6;0.872264!10558-107I9;0.451264!10020-101D2;0.701363!10732-110B3;0.270554!10049-101G4;0.313917!10698-109G5;0.0231032!10437-106E5;0.687323!10417-106C3;0.21826!10035-101E8;0.571719!10171-103B9;0.697025!10157-103A4;0.621712!10034-101E7;0.273468!10072-101I9;0.666522!10199-103F1;0.205636!10200-103F2;0.296692!10697-109G4;0.253232!10723-110A3;0.00271633!10179-103C8;0.546906!10160-103A7;0.990658!10180-103C9;0.503744!10162-103A9;0.804084!10021-101D3;0.499154!10840-111E3;0.297036!10706-109H4;0.228128!10033-101E6;0.98766!10032-101E5;0.870311!10490-107B4;0.736434!10439-106E7;0.230591!10022-101D4;0.469959!10176-103C5;0.207157!10469-106I1;0.242045!10067-101I4;0.433993!10411-106B6;0.986679!10471-106I3;0.129752!10030-101E3;0.865999!10475-106I7;0.318363!10787-110H4;0.0591339!10477-106I9;0.763551!10695-109G2;0.970202!11771-123I7;0.0863601!11772-123I8;0.535056!11773-123I9;0.680316!10093-102C3;0.251693!10442-106F1;0.198417!10442-106F1;0.9732!10201-103F3;0.954173!10639-108I9;0.538459!11843-124H7;0.251795!11841-124H5;0.127118!10693-109F9;0.225608!10436-106E4;0.468817!10483-107A6;0.139285!10282-104F3;0.00237951!10023-101D5;0.231135!10066-101I3;0.373582!10065-101I2;0.643517!10800-110I8;0.359689!10610-108F7;0.55465!10841-111E4;0.942237!10541-107H1;0.231576!10842-111E5;0.657986!10562-108A4;0.336203!10024-101D6;0.881743!10064-101I1;0.367723!10609-108F6;0.522431!10048-101G3;0.762395!10781-110G7;0.519897!10181-103D1;0.832377!10159-103A6;0.236652!10056-101H2;0.336592!10737-110B8;0.83417!10025-101D7;0.949082!10044-101F8;0.401495!10424-106D1;0.213375!10463-106H4;0.475037!10616-108G4;0.2711!10486-107A9;0.0096225!10062-101H8;0.516748!10202-103F4;0.451512!10158-103A5;0.519254!10441-106E9;0.187081!10031-101E4;0.222862!10063-101H9;0.774521!10063-101H9;0.317887!11763-123H8;0.413817!11765-123I1;0.312756!11768-123I4;0.410432!10807-111A6;0.353563!10790-110H7;0.650311!10798-110I6;0.614187!10786-110H3;0.202788!10591-108D6;0.0391898!10593-108D8;0.194395!10590-108D5;0.159538!10026-101D8;0.275299!10096-102C6;0.650079!10168-103B6;0.325248!10154-103A1;0.871992!10209-103G2;0.824279!10061-101H7;0.153524!10027-101D9;0.273717!10043-101F7;0.033962!10783-110G9;0.819011!10028-101E1;0.0582898!10060-101H6;0.384171!10203-103F5;0.487014!10059-101H5;0.111535!10047-101G2;0.094407!10029-101E2;0.138118!10058-101H4;0.0794615!10418-106C4;0.144652!10492-107B6;0.289296!10694-109G1;0.109104!10797-110I5;0.211646!10057-101H3;0.450681!10100-102D1;0.412614!10055-101H1;0.39741!10204-103F6;0.280789!10191-103E2;0.682941!10563-108A5;0.551536
|name=TFCP2L1_mES-Tfcp2l1-ChIP-Seq/Homer
|name=TFCP2L1_mES-Tfcp2l1-ChIP-Seq/Homer
|tomtom_result=Tcfcp2l1#MA0145.1;-4;7.38322e-18;3.51441e-15;7.02882e-15;14;CAAACCGGTTCAAACCGGTT;CCAGTTCAAACCAG;+!Hand1::Tcfe2a#MA0092.1;-1;0.0140179;6.67253;1;10;CAAACCGGTTCAAACCGGTT;ATGCCAGACC;-!Zfx#MA0146.1;-4;0.0140961;6.70973;1;14;CAAACCGGTTCAAACCGGTT;GGGGCCGAGGCCTG;+!Tal1::Gata1#MA0140.1;0;0.0177121;8.43094;1;18;CAAACCGGTTCAAACCGGTT;CTTATCTGTCCCCACCAG;-!Pax4#MA0068.1;8;0.0184219;8.7688;1;20;CAAACCGGTTCAAACCGGTT;GAAAAATTTCCCATACTCCACTCCCCCCCC;+
}}
}}

Latest revision as of 13:48, 7 September 2012

Full Name: TFCP2L1_mES-Tfcp2l1-ChIP-Seq/Homer

Motif matrix
POACGT
1117012891153755
218476861284550
325242311210402
420482051328786
5442151444
6419260341341
7182542158380
8138342674
981713761002074
1033612452312555
1177715906641336
1215807821332673
1327392311096301
142158831301825
1544272874
16306270341354
17179542070498
1846642934
1982514151881939
2049312932102371

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Tcfcp2l1#MA0145.1-47.38322e-183.51441e-157.02882e-1514CAAACCGGTTCAAACCGGTTCCAGTTCAAACCAG+
Hand1::Tcfe2a#MA0092.1-10.01401796.67253110CAAACCGGTTCAAACCGGTTATGCCAGACC-
Zfx#MA0146.1-40.01409616.70973114CAAACCGGTTCAAACCGGTTGGGGCCGAGGCCTG+
Tal1::Gata1#MA0140.100.01771218.43094118CAAACCGGTTCAAACCGGTTCTTATCTGTCCCCACCAG-
Pax4#MA0068.180.01842198.7688120CAAACCGGTTCAAACCGGTTGAAAAATTTCCCATACTCCACTCCCCCCCC+
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