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MacroAPE 1083:CNhs12035 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;10.364090003807425;84.94605227707865;141.35333782480498;65.1051152078898!2;98.52582978860849;17.693314272871906;122.1921487152984;63.3573025...")
 
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2476!11440-118H9;3.49476e-09!11532-120A2;2.61632e-07!11693-123A1;0.376855!11292-117A5;0.129941!11369-118A1;0.226915!11441-118I1;0.09633!10007-101B4;0.387614!11520-119H8;2.47085e-12!11600-120H7;0.0122064!11681-122H7;0.00805251!11216-116B1;0.00267352!12179-129A1;0.0396655!12180-129A2;0.174535!12181-129A3;0.292141!12176-128I7;0.2555!12177-128I8;0.141448!12182-129A4;0.149854!12183-129A5;0.321101!12184-129A6;0.287499!10809-111A8;0.27959!10597-108E3;2.39216e-06!10717-109I6;0.0128295!10455-106G5;0.104339!10534-107G3;6.48824e-05!10429-106D6;1.51224e-05!10464-106H5;1.49662e-08!10827-111C8;9.70042e-13!10789-110H6;5.73711e-05!10828-111C9;0.0187607!10788-110H5;0.0519498!10792-110H9;0.000359665!10765-110E9;0.0022959!10829-111D1;0.0027723!10830-111D2;0.000252321!10831-111D3;0.00112575!10832-111D4;0.00272557!10833-111D5;2.94976e-05!10764-110E8;3.23517e-06!10770-110F5;6.30849e-05!10399-106A3;0.00478499!10400-106A4;3.32655e-05!10405-106A9;4.30744e-05!10834-111D6;5.4589e-06!10835-111D7;0.00168975!10836-111D8;0.000110185!10837-111D9;9.3955e-06!10699-109G6;0.00231219!10802-111A1;0.000192235!10796-110I4;1.08627e-05!10010-101C1;0.0227767!10810-111A9;1.26634e-08!10421-106C7;1.32994e-06!10708-109H6;0.00287127!12235-129G3;0.00415051!12236-129G4;0.0249853!12237-129G5;0.371349!10167-103B5;0.0964919!10151-102I7;0.514173!10428-106D5;0.396562!10795-110I3;0.663606!10805-111A4;0.00294784!10052-101G7;6.24362e-06!10189-103D9;2.30969e-05!10589-108D4;9.16398e-07!10425-106D2;0.0172313!10427-106D4;0.0322482!10702-109G9;0.000103199!10432-106D9;0.00469625!10496-107C1;0.0055085!10718-109I7;0.0146402!10011-101C2;0.00168257!10053-101G8;5.68483e-08!10686-109F2;0.314384!10084-102B3;0.164555!10012-101C3;0.242804!10085-102B4;0.23954!10482-107A5;0.985818!10419-106C5;0.00211849!10080-102A8;0.00276355!10760-110E4;2.26421e-06!10709-109H7;0.151453!10710-109H8;0.0023827!10703-109H1;0.00552293!10719-109I8;2.3788e-05!10642-109A3;5.70784e-07!10177-103C6;0.0347688!10164-103B2;0.381142!10173-103C2;0.521558!10166-103B4;0.427893!10083-102B2;0.79444!10188-103D8;0.862275!10552-107I3;0.25728!10553-107I4;0.000642323!10013-101C4;0.291667!10536-107G5;1.28042e-06!10618-108G6;0.163862!10423-106C9;2.09388e-05!10785-110H2;0.00114392!12238-129G6;0.000357165!12239-129G7;0.000159678!12240-129G8;0.0128046!10416-106C2;0.0149418!10801-110I9;4.31946e-06!10766-110F1;0.00472434!10824-111C5;0.0295748!10825-111C6;7.01913e-05!10826-111C7;0.000116536!10454-106G4;0.000110287!10409-106B4;6.50965e-05!10638-108I8;0.00328958!10636-108I6;0.00592778!10513-107D9;0.0193083!10420-106C6;0.000504352!10082-102B1;2.18623e-08!10014-101C5;5.65002e-05!10070-101I7;1.59171e-07!10452-106G2;0.000182759!10453-106G3;5.25923e-06!10449-106F8;7.63932e-08!10042-101F6;1.03161e-08!10069-101I6;0.0649615!10193-103E4;0.00192242!10631-108I1;0.363472!10438-106E6;1.26334e-06!10488-107B2;0.0268422!10196-103E7;0.0144953!10071-101I8;1.38568e-06!10071-101I8;5.7536e-05!10041-101F5;0.900218!10451-106G1;7.17951e-05!10450-106F9;1.22263e-08!10604-108F1;1.61428e-07!10605-108F2;0.120358!10606-108F3;0.128217!10603-108E9;0.155517!10497-107C2;0.122455!10448-106F7;0.276966!10643-109A4;0.0029001!10426-106D3;0.0636168!10431-106D8;0.350735!10197-103E8;0.00224336!10443-106F2;3.62682e-07!10815-111B5;0.162396!10816-111B6;0.00369899!10817-111B7;0.00110272!10015-101C6;0.00217591!10410-106B5;1.29254e-09!10054-101G9;0.00011882!10758-110E2;0.00153093!10711-109H9;0.0205877!10040-101F4;0.0408457!10470-106I2;0.42417!10415-106C1;0.0296192!10198-103E9;0.139044!10614-108G2;2.24274e-07!10612-108F9;0.046774!10549-107H9;0.160355!10615-108G3;3.60562e-05!10487-107B1;0.0109282!10433-106E1;0.00278091!10688-109F4;0.122501!10444-106F3;0.0694533!10444-106F3;0.690368!10485-107A8;0.734686!10413-106B8;0.0597661!10175-103C4;0.152324!10161-103A8;0.347149!12131-128D7;0.223482!10624-108H3;0.00833473!10712-109I1;0.8513!10205-103F7;4.53237e-06!10206-103F8;3.32864e-06!10207-103F9;3.23782e-05!10050-101G5;0.000137893!10051-101G6;0.00012909!10016-101C7;0.000233562!10046-101G1;1.7119e-05!10778-110G4;0.00343001!10633-108I3;0.00662143!10818-111B8;0.000621466!10819-111B9;0.10406!10820-111C1;0.0876869!10484-107A7;0.0897163!10808-111A7;0.0158293!10169-103B7;0.00012378!10153-102I9;0.403831!13425-144D5;0.259009!13433-144E4;7.46029e-16!13437-144E8;8.52983e-15!11904-125F5;2.05106e-15!11905-125F6;0.00416089!10039-101F3;0.0458405!10791-110H8;0.37435!10017-101C8;0.168961!10045-101F9;5.85606e-08!10509-107D5;0.00017188!10839-111E2;0.00447574!10692-109F8;0.0836128!10079-102A7;0.0138198!10078-102A6;0.000130023!10721-110A1;0.000116451!10569-108B2;6.37659e-05!10570-108B3;0.000205713!10571-108B4;0.000966173!10647-109A8;0.00016607!10752-110D5;0.0646!10782-110G8;0.000674228!10726-110A6;0.555325!10018-101C9;0.717316!10086-102B5;0.000563132!10182-103D2;0.00620081!10165-103B3;0.249067!10499-107C4;0.191038!10408-106B3;0.335211!10019-101D1;0.562835!10068-101I5;8.98196e-10!10075-102A3;3.24148e-05!10077-102A5;2.65497e-09!10727-110A7;0.000877338!10775-110G1;0.00562623!10412-106B7;2.0524e-05!12231-129F8;0.499191!12232-129F9;0.017254!12233-129G1;0.00156285!12234-129G2;0.00467458!10414-106B9;0.157735!10170-103B8;0.00922387!10183-103D3;0.699916!10150-102I6;0.487596!10174-103C3;0.401444!10155-103A2;0.0544048!10038-101F2;0.0984841!10838-111E1;0.0578435!10759-110E3;2.67169e-06!10514-107E1;0.15009!10465-106H6;0.00508691!10691-109F7;0.0288191!10843-111E6;0.702263!10844-111E7;1.85682e-05!11747-123G1;0.00438895!11748-123G2;0.0145305!11749-123G3;0.0295219!11750-123G4;0.00929407!11751-123G5;0.000471053!11840-124H4;4.82818e-06!11752-123G6;1.06078e-06!11753-123G7;0.0020582!11754-123G8;3.74811e-05!11755-123G9;0.014736!11756-123H1;0.0776069!11833-124G6;0.115657!11760-123H5;0.00869517!11836-124G9;0.0137119!11758-123H3;0.000220122!11835-124G8;0.00127683!11762-123H7;2.73338e-05!11838-124H2;0.000143636!11757-123H2;0.000290433!11759-123H4;0.0611739!11761-123H6;0.0409314!11842-124H6;0.00448036!11837-124H1;0.00198085!10568-108B1;0.00100102!13230-141I8;0.649051!13231-141I9;0.000116072!10696-109G3;0.000140934!10493-107B7;0.041437!10494-107B8;0.00888922!10850-111F4;0.336804!10851-111F5;0.0258589!10852-111F6;0.953127!10853-111F7;0.558392!10854-111F8;0.0336568!10855-111F9;0.00449135!10856-111G1;0.0819169!10847-111F1;0.627351!10846-111E9;0.756674!10848-111F2;0.0193109!10845-111E8;0.305984!10857-111G2;0.00274015!10858-111G3;0.00445734!10156-103A3;0.805221!11901-125F2;0.367677!11902-125F3;0.0144618!11903-125F4;0.0011811!10689-109F5;0.00349127!10648-109A9;0.00755781!10784-110H1;0.00590142!10744-110C6;0.0140108!10772-110F7;0.00120062!10474-106I6;6.46874e-06!10600-108E6;0.113999!10684-109E9;0.283898!12226-129F3;0.614665!12227-129F4;0.712303!10508-107D4;0.0118978!10539-107G8;0.00859925!10607-108F4;0.113806!10555-107I6;9.20627e-11!10774-110F9;0.00299203!10637-108I7;1.02965e-08!10663-109C6;1.30775e-05!10728-110A8;6.26468e-08!10729-110A9;6.02567e-07!10430-106D7;0.00211507!10730-110B1;1.74214e-05!10813-111B3;2.35037e-05!10812-111B2;0.00858843!10037-101F1;0.00857496!10172-103C1;0.322686!10163-103B1;0.708323!10076-102A4;0.397472!10073-102A1;0.44213!10036-101E9;0.815433!10195-103E6;0.391631!10277-104E7;0.300497!10434-106E2;0.129138!10550-107I1;0.236667!10545-107H5;0.00041285!10544-107H4;0.461729!10704-109H2;0.00611!10510-107D6;0.202361!10558-107I9;0.00935144!10020-101D2;0.280413!10732-110B3;0.000422454!10049-101G4;0.554023!10698-109G5;0.0837463!10437-106E5;0.00554242!10417-106C3;0.0324924!10035-101E8;0.875505!10171-103B9;0.386576!10157-103A4;0.62418!10034-101E7;0.430322!10072-101I9;0.361973!10199-103F1;0.620875!10200-103F2;0.00123268!10697-109G4;7.75078e-07!10723-110A3;0.00146874!10179-103C8;0.934465!10160-103A7;0.756571!10180-103C9;0.912432!10162-103A9;0.97498!10021-101D3;0.966064!10840-111E3;4.72038e-12!10706-109H4;1.32245e-06!10033-101E6;0.160435!10032-101E5;0.267574!10490-107B4;0.350853!10439-106E7;9.03169e-06!10022-101D4;0.191877!10176-103C5;2.73146e-06!10469-106I1;0.675293!10067-101I4;0.14496!10411-106B6;0.00478901!10471-106I3;0.597578!10030-101E3;0.236025!10475-106I7;0.0102172!10787-110H4;2.80753e-09!10477-106I9;1.95227e-05!10695-109G2;0.0220127!11771-123I7;0.0054045!11772-123I8;0.0948517!11773-123I9;0.00294058!10093-102C3;0.0198379!10442-106F1;0.00424565!10442-106F1;0.459947!10201-103F3;0.371879!10639-108I9;1.68877e-05!11843-124H7;0.0119459!11841-124H5;0.108184!10693-109F9;0.0156124!10436-106E4;0.0247212!10483-107A6;0.111729!10282-104F3;0.32936!10023-101D5;0.0159682!10066-101I3;0.00106571!10065-101I2;0.00397098!10800-110I8;3.00132e-05!10610-108F7;0.00873373!10841-111E4;0.015155!10541-107H1;5.88607e-12!10842-111E5;1.64125e-05!10562-108A4;9.05074e-08!10024-101D6;0.0326105!10064-101I1;4.72921e-07!10609-108F6;3.70975e-05!10048-101G3;0.0385048!10781-110G7;1.63383e-05!10181-103D1;0.067944!10159-103A6;0.067379!10056-101H2;0.121896!10737-110B8;0.0350109!10025-101D7;0.0070755!10044-101F8;0.000352065!10424-106D1;0.000147389!10463-106H4;0.000166515!10616-108G4;0.128037!10486-107A9;0.357667!10062-101H8;0.00187184!10202-103F4;0.00189321!10158-103A5;0.000128229!10441-106E9;0.108327!10031-101E4;0.00011572!10063-101H9;0.272459!10063-101H9;0.945256!11763-123H8;5.06679e-06!11765-123I1;0.000758644!11768-123I4;3.15432e-06!10807-111A6;0.000152753!10790-110H7;0.000411684!10798-110I6;2.69583e-08!10786-110H3;0.090779!10591-108D6;2.63131e-07!10593-108D8;0.00259972!10590-108D5;0.0034342!10026-101D8;1.43143e-06!10096-102C6;0.371466!10168-103B6;0.000194216!10154-103A1;0.254218!10209-103G2;0.288525!10061-101H7;5.23305e-07!10027-101D9;0.000873505!10043-101F7;0.00586754!10783-110G9;0.474167!10028-101E1;0.0618839!10060-101H6;0.00135247!10203-103F5;0.0146197!10059-101H5;3.0761e-06!10047-101G2;1.32636e-05!10029-101E2;5.6171e-08!10058-101H4;2.07055e-10!10418-106C4;0.000122782!10492-107B6;0.00912472!10694-109G1;0.0112933!10797-110I5;0.0775399!10057-101H3;0.442148!10100-102D1;2.01753e-06!10055-101H1;0.000167506!10204-103F6;0.00223305!10191-103E2;2.04264e-05!10563-108A5;1.50795e-05
|name=CNhs12035_bu_f0
|name=CNhs12035_bu_f0
|tomtom_result=NFIC#MA0161.1;-4;0.00222638;1.05976;1;6;GGGCCTGGCAGG;TTGGCA;+!Hand1::Tcfe2a#MA0092.1;-1;0.00348675;1.6597;1;10;GGGCCTGGCAGG;GGTCTGGCAT;+!achi#MA0207.1;-4;0.00388912;1.85122;1;6;GGGCCTGGCAGG;CTGTCA;-!vis#MA0252.1;-4;0.00507633;2.41633;1;6;GGGCCTGGCAGG;CTGTCA;-!hth#MA0227.1;-4;0.00541646;2.57823;1;6;GGGCCTGGCAGG;CTGTCA;-!TOS8#MA0408.1;-4;0.0113403;5.39798;1;8;GGGCCTGGCAGG;CTGTCAAA;+!NHP10#MA0344.1;-2;0.0178978;8.51935;1;8;GGGCCTGGCAGG;GCCGGGGA;+!ELK1#MA0028.1;-1;0.0181875;8.65726;1;10;GGGCCTGGCAGG;GAGCCGGAAG;+!znf143#MA0088.1;6;0.0192362;9.15645;1;12;GGGCCTGGCAGG;GCAAGGCATGATGGGAAATC;-!Tal1::Gata1#MA0140.1;2;0.0193986;9.23376;1;12;GGGCCTGGCAGG;CTGGTGGGGACAGATAAG;+!Egr1#MA0162.1;-1;0.0202262;9.62769;1;11;GGGCCTGGCAGG;TGCGTGGGCGT;+!RIM101#MA0368.1;-3;0.0203652;9.69382;1;7;GGGCCTGGCAGG;CTTGGCG;-
}}
}}

Latest revision as of 13:50, 7 September 2012

Full Name: CNhs12035_bu_f0

Motif matrix
POACGT
110.36409000380742584.94605227707865141.3533378248049865.1051152078898
298.5258297886084917.693314272871906122.192148715298463.35730253680198
334.125667215810815110.05373495414177155.401102544646762.188090598981525
471.2617418572866131.4297064697442757.56419585741508641.512951129134926
50.0277.035670802394824.7329245111861480.0
64.0785219804674871.63242942052636634.894768960476377291.1628749521106
70.00.38942342929212415300.991094586411070.388077297877667
80.8034428793158930.3702678410388956244.3966633718607456.19822122136546
920.201460371953313188.9193755036045690.831842342165231.81591709585779
10230.3224833986806756.3784732380704313.1956107621514251.8720279146784486
1191.198605061924130.6428198603660467208.236445675145381.6907247161455667
1276.1889981273285217.951119789185263164.9904906051051242.63798679196202

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFIC#MA0161.1-40.002226381.0597616GGGCCTGGCAGGTTGGCA+
Hand1::Tcfe2a#MA0092.1-10.003486751.6597110GGGCCTGGCAGGGGTCTGGCAT+
achi#MA0207.1-40.003889121.8512216GGGCCTGGCAGGCTGTCA-
vis#MA0252.1-40.005076332.4163316GGGCCTGGCAGGCTGTCA-
hth#MA0227.1-40.005416462.5782316GGGCCTGGCAGGCTGTCA-
TOS8#MA0408.1-40.01134035.3979818GGGCCTGGCAGGCTGTCAAA+
NHP10#MA0344.1-20.01789788.5193518GGGCCTGGCAGGGCCGGGGA+
ELK1#MA0028.1-10.01818758.65726110GGGCCTGGCAGGGAGCCGGAAG+
znf143#MA0088.160.01923629.15645112GGGCCTGGCAGGGCAAGGCATGATGGGAAATC-
Tal1::Gata1#MA0140.120.01939869.23376112GGGCCTGGCAGGCTGGTGGGGACAGATAAG+
Egr1#MA0162.1-10.02022629.62769111GGGCCTGGCAGGTGCGTGGGCGT+
RIM101#MA0368.1-30.02036529.6938217GGGCCTGGCAGGCTTGGCG-
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