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MacroAPE 1083:CNhs12846 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;96.20412995495408;35.16807221442381;1520.2362443046084;289.4527640054777!2;311.39750572383923;249.077839769671;810.3890252626328;570.1968397...")
 
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.303744!10429-106D6;0.644975!10464-106H5;0.776863!10827-111C8;0.402547!10789-110H6;0.934205!10828-111C9;0.711282!10788-110H5;0.738299!10792-110H9;0.799284!10765-110E9;0.612797!10829-111D1;0.849797!10830-111D2;0.812547!10831-111D3;0.445319!10832-111D4;0.988853!10833-111D5;0.940619!10764-110E8;0.402776!10770-110F5;0.974982!10399-106A3;0.590738!10400-106A4;0.984091!10405-106A9;0.900521!10834-111D6;0.813314!10835-111D7;0.908826!10836-111D8;0.618964!10837-111D9;0.809928!10699-109G6;0.529394!10802-111A1;0.776141!10796-110I4;0.509527!10010-101C1;0.237348!10810-111A9;0.200615!10421-106C7;0.607148!10708-109H6;0.684331!12235-129G3;0.446699!12236-129G4;0.206825!12237-129G5;0.106096!10167-103B5;0.0426911!10151-102I7;0.609905!10428-106D5;0.565033!10795-110I3;0.533664!10805-111A4;0.816702!10052-101G7;0.365978!10189-103D9;0.1754!10589-108D4;0.420935!10425-106D2;0.0722658!10427-106D4;0.915616!10702-109G9;0.081252!10432-106D9;0.123447!10496-107C1;0.134997!10718-109I7;0.0316196!10011-101C2;0.55192!10053-101G8;0.178524!10686-109F2;0.717934!10084-102B3;0.00668759!10012-101C3;0.561521!10085-102B4;0.398074!10482-107A5;0.904097!10419-106C5;0.187553!10080-102A8;0.116569!10760-110E4;0.437757!10709-109H7;0.0795196!10710-109H8;0.0361639!10703-109H1;0.220033!10719-109I8;0.289807!10642-109A3;0.224885!10177-103C6;0.68938!10164-103B2;0.481147!10173-103C2;0.44208!10166-103B4;0.982313!10083-102B2;0.680616!10188-103D8;0.960226!10552-107I3;0.297497!10553-107I4;0.281319!10013-101C4;0.0427945!10536-107G5;0.255074!10618-108G6;0.693866!10423-106C9;0.29409!10785-110H2;0.245093!12238-129G6;0.0271386!12239-129G7;0.501698!12240-129G8;0.356567!10416-106C2;0.460075!10801-110I9;0.368809!10766-110F1;0.6176!10824-111C5;0.579858!10825-111C6;0.655225!10826-111C7;0.602339!10454-106G4;0.721018!10409-106B4;0.988335!10638-108I8;0.594271!10636-108I6;0.0657847!10513-107D9;0.347705!10420-106C6;0.10075!10082-102B1;0.3422!10014-101C5;0.801509!10070-101I7;0.646595!10452-106G2;0.978333!10453-106G3;0.276404!10449-106F8;0.175767!10042-101F6;0.16087!10069-101I6;0.278895!10193-103E4;0.599207!10631-108I1;0.348558!10438-106E6;0.480815!10488-107B2;0.0667384!10196-103E7;0.363431!10071-101I8;0.888841!10071-101I8;0.688554!10041-101F5;0.643694!10451-106G1;0.247575!10450-106F9;0.177404!10604-108F1;0.456374!10605-108F2;0.727533!10606-108F3;0.606235!10603-108E9;0.543404!10497-107C2;0.767195!10448-106F7;0.210008!10643-109A4;0.903647!10426-106D3;0.0269449!10431-106D8;0.337955!10197-103E8;0.0744578!10443-106F2;0.325949!10815-111B5;0.826236!10816-111B6;0.602036!10817-111B7;0.654781!10015-101C6;0.5833!10410-106B5;0.418073!10054-101G9;0.707523!10758-110E2;0.341714!10711-109H9;0.48514!10040-101F4;0.422943!10470-106I2;0.456477!10415-106C1;0.0548248!10198-103E9;0.293241!10614-108G2;0.215832!10612-108F9;0.560101!10549-107H9;0.019125!10615-108G3;0.974075!10487-107B1;0.341235!10433-106E1;0.583451!10688-109F4;0.685721!10444-106F3;0.122096!10444-106F3;0.467746!10485-107A8;0.619199!10413-106B8;0.941597!10175-103C4;0.305509!10161-103A8;0.657946!12131-128D7;0.358488!10624-108H3;0.714613!10712-109I1;0.435021!10205-103F7;0.828933!10206-103F8;0.141307!10207-103F9;0.228082!10050-101G5;0.0623575!10051-101G6;0.965143!10016-101C7;0.306817!10046-101G1;0.169047!10778-110G4;0.214362!10633-108I3;0.12982!10818-111B8;0.441595!10819-111B9;0.825776!10820-111C1;0.886508!10484-107A7;0.802218!10808-111A7;0.46446!10169-103B7;0.712643!10153-102I9;0.673518!13425-144D5;0.434508!13433-144E4;0.161773!13437-144E8;0.180297!11904-125F5;0.20416!11905-125F6;0.0447951!10039-101F3;0.050756!10791-110H8;0.500197!10017-101C8;0.305015!10045-101F9;0.875382!10509-107D5;0.875002!10839-111E2;0.926281!10692-109F8;0.182231!10079-102A7;0.030827!10078-102A6;0.23251!10721-110A1;0.215747!10569-108B2;0.388789!10570-108B3;0.192232!10571-108B4;0.162023!10647-109A8;0.0859653!10752-110D5;0.458174!10782-110G8;0.408958!10726-110A6;0.0921702!10018-101C9;0.351429!10086-102B5;0.092798!10182-103D2;0.27407!10165-103B3;0.541434!10499-107C4;0.498969!10408-106B3;0.165443!10019-101D1;0.274494!10068-101I5;0.111627!10075-102A3;0.25202!10077-102A5;0.259162!10727-110A7;0.200592!10775-110G1;0.507265!10412-106B7;0.224933!12231-129F8;0.197056!12232-129F9;0.926334!12233-129G1;0.663652!12234-129G2;0.577982!10414-106B9;0.712368!10170-103B8;0.551226!10183-103D3;0.579241!10150-102I6;0.59016!10174-103C3;0.510688!10155-103A2;0.33101!10038-101F2;0.3094!10838-111E1;0.36823!10759-110E3;0.269886!10514-107E1;0.671675!10465-106H6;0.65833!10691-109F7;0.876965!10843-111E6;0.998593!10844-111E7;0.74399!11747-123G1;0.203679!11748-123G2;0.000865713!11749-123G3;0.105144!11750-123G4;0.00170237!11751-123G5;0.00296227!11840-124H4;0.0491624!11752-123G6;0.0851393!11753-123G7;0.0823517!11754-123G8;0.00591576!11755-123G9;0.000322967!11756-123H1;0.000200497!11833-124G6;0.119427!11760-123H5;0.49731!11836-124G9;0.357631!11758-123H3;0.0582405!11835-124G8;0.168568!11762-123H7;0.795425!11838-124H2;0.231588!11757-123H2;0.598622!11759-123H4;0.0660229!11761-123H6;0.0492963!11842-124H6;0.929587!11837-124H1;0.306618!10568-108B1;0.286894!13230-141I8;0.703009!13231-141I9;0.119126!10696-109G3;0.0903228!10493-107B7;0.038851!10494-107B8;0.0306661!10850-111F4;0.484314!10851-111F5;0.113248!10852-111F6;0.875422!10853-111F7;0.729845!10854-111F8;0.135753!10855-111F9;0.806723!10856-111G1;0.648555!10847-111F1;0.173238!10846-111E9;0.573249!10848-111F2;0.56242!10845-111E8;0.538979!10857-111G2;0.41875!10858-111G3;0.291224!10156-103A3;0.118652!11901-125F2;0.432552!11902-125F3;0.126739!11903-125F4;0.123553!10689-109F5;0.0528852!10648-109A9;0.157483!10784-110H1;0.248935!10744-110C6;0.118626!10772-110F7;0.350639!10474-106I6;0.247471!10600-108E6;0.14109!10684-109E9;0.433032!12226-129F3;0.00378395!12227-129F4;0.0129729!10508-107D4;0.537364!10539-107G8;0.54307!10607-108F4;0.414712!10555-107I6;0.867691!10774-110F9;0.60408!10637-108I7;0.134658!10663-109C6;0.890422!10728-110A8;0.556149!10729-110A9;0.680025!10430-106D7;0.156459!10730-110B1;0.283014!10813-111B3;0.273267!10812-111B2;0.413024!10037-101F1;0.203993!10172-103C1;0.414298!10163-103B1;0.516889!10076-102A4;0.520489!10073-102A1;0.526101!10036-101E9;0.617013!10195-103E6;0.521399!10277-104E7;0.437351!10434-106E2;0.302865!10550-107I1;0.433534!10545-107H5;0.175262!10544-107H4;0.248898!10704-109H2;0.144922!10510-107D6;0.557099!10558-107I9;0.382115!10020-101D2;0.51424!10732-110B3;0.234194!10049-101G4;0.483696!10698-109G5;0.22362!10437-106E5;0.115977!10417-106C3;0.193675!10035-101E8;0.173975!10171-103B9;0.475966!10157-103A4;0.558191!10034-101E7;0.485272!10072-101I9;0.435127!10199-103F1;0.674779!10200-103F2;0.26949!10697-109G4;0.460512!10723-110A3;0.766485!10179-103C8;0.3565!10160-103A7;0.328827!10180-103C9;0.269219!10162-103A9;0.388592!10021-101D3;0.537957!10840-111E3;0.218537!10706-109H4;0.067101!10033-101E6;0.393494!10032-101E5;0.490159!10490-107B4;0.527562!10439-106E7;0.0548926!10022-101D4;0.13142!10176-103C5;0.295523!10469-106I1;0.647492!10067-101I4;0.00280023!10411-106B6;0.700359!10471-106I3;0.531885!10030-101E3;0.0798252!10475-106I7;0.326098!10787-110H4;0.879634!10477-106I9;0.695462!10695-109G2;0.673545!11771-123I7;0.548005!11772-123I8;0.901303!11773-123I9;0.820523!10093-102C3;0.389077!10442-106F1;0.53193!10442-106F1;0.750656!10201-103F3;0.901847!10639-108I9;0.779834!11843-124H7;0.0275802!11841-124H5;0.0257185!10693-109F9;0.0970503!10436-106E4;0.554748!10483-107A6;0.388331!10282-104F3;0.0967323!10023-101D5;0.858571!10066-101I3;0.612836!10065-101I2;0.653423!10800-110I8;0.606136!10610-108F7;0.0870349!10841-111E4;0.836313!10541-107H1;0.230846!10842-111E5;0.955703!10562-108A4;0.396779!10024-101D6;0.103682!10064-101I1;0.985552!10609-108F6;0.860744!10048-101G3;0.160763!10781-110G7;0.130116!10181-103D1;0.1816!10159-103A6;0.374739!10056-101H2;0.20331!10737-110B8;0.615478!10025-101D7;0.360955!10044-101F8;0.0306667!10424-106D1;0.0618344!10463-106H4;0.721523!10616-108G4;0.125312!10486-107A9;0.0539721!10062-101H8;0.0591469!10202-103F4;0.71374!10158-103A5;0.802502!10441-106E9;0.135226!10031-101E4;0.580165!10063-101H9;0.484257!10063-101H9;0.6234!11763-123H8;0.555825!11765-123I1;0.0305323!11768-123I4;0.0660614!10807-111A6;0.119215!10790-110H7;0.916594!10798-110I6;0.532251!10786-110H3;0.700308!10591-108D6;0.330081!10593-108D8;0.48109!10590-108D5;0.46503!10026-101D8;0.0596937!10096-102C6;0.152301!10168-103B6;0.755314!10154-103A1;0.557961!10209-103G2;0.330901!10061-101H7;0.59329!10027-101D9;0.77572!10043-101F7;0.84488!10783-110G9;0.560104!10028-101E1;0.208295!10060-101H6;0.905972!10203-103F5;0.689334!10059-101H5;0.649505!10047-101G2;0.70029!10029-101E2;0.766899!10058-101H4;0.210063!10418-106C4;0.504371!10492-107B6;0.0697229!10694-109G1;0.151872!10797-110I5;0.900411!10057-101H3;0.39402!10100-102D1;0.286745!10055-101H1;0.310315!10204-103F6;0.854871!10191-103E2;0.33405!10563-108A5;0.241164
|name=CNhs12846_bl_f1
|name=CNhs12846_bl_f1
|tomtom_result=NDT80#MA0343.1;4;0.000212798;0.101292;0.202584;10;GGCTTTGGGA;TTGCGTTTTTGTGGCCGGAAA;-!RUNX1#MA0002.2;0;0.0055552;2.64427;1;10;GGCTTTGGGA;GTCTGTGGTTT;+!SOX10#MA0442.1;-2;0.014209;6.76348;1;6;GGCTTTGGGA;CTTTGT;+!RME1#MA0370.1;1;0.0184121;8.76417;1;9;GGCTTTGGGA;TTCCTTTGGA;-!CRZ1#MA0285.1;2;0.0202085;9.61923;1;7;GGCTTTGGGA;GTGGCTTAG;-
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: CNhs12846_bl_f1

Motif matrix
POACGT
196.2041299549540835.168072214423811520.2362443046084289.4527640054777
2311.39750572383923249.077839769671810.3890252626328570.1968397233189
336.49905856385706926.9745333894299187.1978868030151790.3897317231607
40.00.00.01941.061210479463
542.57468468051823383.8588587674906545.5377348608527969.0899321706005
60.00.00.01941.061210479463
72.81112129930962772.013278372518651934.22353243511592.01327837251865
8342.232955556926510.848715814318616916.881980706529671.0975584016886
9503.7427259172564209.45320314103211167.894141865445859.971139555727284
10791.31575894393465.536874860890995540.9711410721677603.2374356024694

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NDT80#MA0343.140.0002127980.1012920.20258410GGCTTTGGGATTGCGTTTTTGTGGCCGGAAA-
RUNX1#MA0002.200.00555522.64427110GGCTTTGGGAGTCTGTGGTTT+
SOX10#MA0442.1-20.0142096.7634816GGCTTTGGGACTTTGT+
RME1#MA0370.110.01841218.7641719GGCTTTGGGATTCCTTTGGA-
CRZ1#MA0285.120.02020859.6192317GGCTTTGGGAGTGGCTTAG-
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