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MacroAPE 1083:CNhs12036 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.7829136947267932;168.20964369058788;135.70742044793138;0.7829136947267932!2;0.0;0.0;0.0;305.4828915279728!3;0.0;0.0;305.4828915279728;0.0!...")
 
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H5;0.595203!10792-110H9;0.858325!10765-110E9;0.755697!10829-111D1;0.904546!10830-111D2;0.629522!10831-111D3;0.93377!10832-111D4;0.761448!10833-111D5;0.774025!10764-110E8;0.777373!10770-110F5;0.692958!10399-106A3;0.806323!10400-106A4;0.928161!10405-106A9;0.874118!10834-111D6;0.849493!10835-111D7;0.88672!10836-111D8;0.769495!10837-111D9;0.928143!10699-109G6;0.902115!10802-111A1;0.596803!10796-110I4;0.693829!10010-101C1;0.904008!10810-111A9;0.608444!10421-106C7;0.747245!10708-109H6;0.425643!12235-129G3;0.322979!12236-129G4;0.585232!12237-129G5;0.779019!10167-103B5;0.63167!10151-102I7;0.966689!10428-106D5;0.940501!10795-110I3;0.703433!10805-111A4;0.815911!10052-101G7;0.406164!10189-103D9;0.925893!10589-108D4;0.23206!10425-106D2;0.45331!10427-106D4;0.305394!10702-109G9;0.630332!10432-106D9;0.911021!10496-107C1;0.843726!10718-109I7;0.622747!10011-101C2;0.496451!10053-101G8;0.490172!10686-109F2;0.568724!10084-102B3;0.526046!10012-101C3;0.791515!10085-102B4;0.924318!10482-107A5;0.524499!10419-106C5;0.836286!10080-102A8;0.483088!10760-110E4;0.323313!10709-109H7;0.581906!10710-109H8;0.592396!10703-109H1;0.857718!10719-109I8;0.399602!10642-109A3;0.697384!10177-103C6;0.13033!10164-103B2;0.898064!10173-103C2;0.989011!10166-103B4;0.789056!10083-102B2;0.995738!10188-103D8;0.582285!10552-107I3;0.818383!10553-107I4;0.27126!10013-101C4;0.403447!10536-107G5;0.834726!10618-108G6;0.607062!10423-106C9;0.945432!10785-110H2;0.865072!12238-129G6;0.993965!12239-129G7;0.386263!12240-129G8;0.978709!10416-106C2;0.564338!10801-110I9;0.91433!10766-110F1;0.36238!10824-111C5;0.666912!10825-111C6;0.858139!10826-111C7;0.692458!10454-106G4;0.972314!10409-106B4;0.908777!10638-108I8;0.722601!10636-108I6;0.927298!10513-107D9;0.467067!10420-106C6;0.532701!10082-102B1;0.498032!10014-101C5;0.0625907!10070-101I7;0.441025!10452-106G2;0.331382!10453-106G3;0.929437!10449-106F8;0.868137!10042-101F6;0.845848!10069-101I6;0.759979!10193-103E4;0.347367!10631-108I1;0.931296!10438-106E6;0.824909!10488-107B2;0.768816!10196-103E7;0.457131!10071-101I8;0.564527!10071-101I8;0.329878!10041-101F5;0.770974!10451-106G1;0.82034!10450-106F9;0.386787!10604-108F1;0.344786!10605-108F2;0.723349!10606-108F3;0.563411!10603-108E9;0.734331!10497-107C2;0.988287!10448-106F7;0.79523!10643-109A4;0.910721!10426-106D3;0.588267!10431-106D8;0.962995!10197-103E8;0.607864!10443-106F2;0.954693!10815-111B5;0.869642!10816-111B6;0.246484!10817-111B7;0.249202!10015-101C6;0.229652!10410-106B5;0.629403!10054-101G9;0.394461!10758-110E2;0.979301!10711-109H9;0.420709!10040-101F4;0.624512!10470-106I2;0.931322!10415-106C1;0.371549!10198-103E9;0.0668289!10614-108G2;0.700301!10612-108F9;0.354302!10549-107H9;0.687426!10615-108G3;0.855887!10487-107B1;0.525061!10433-106E1;0.768712!10688-109F4;0.749157!10444-106F3;0.743003!10444-106F3;0.290803!10485-107A8;0.301354!10413-106B8;0.457209!10175-103C4;0.114695!10161-103A8;0.900812!12131-128D7;0.928651!10624-108H3;0.962612!10712-109I1;0.726903!10205-103F7;0.563578!10206-103F8;0.84467!10207-103F9;0.900799!10050-101G5;0.63663!10051-101G6;0.941208!10016-101C7;0.730403!10046-101G1;0.806638!10778-110G4;0.871134!10633-108I3;0.853153!10818-111B8;0.463642!10819-111B9;0.732124!10820-111C1;0.671539!10484-107A7;0.808773!10808-111A7;0.529862!10169-103B7;0.787325!10153-102I9;0.935103!13425-144D5;0.998288!13433-144E4;0.636361!13437-144E8;0.661909!11904-125F5;0.726!11905-125F6;0.899315!10039-101F3;0.59142!10791-110H8;0.925234!10017-101C8;0.595447!10045-101F9;0.620581!10509-107D5;0.998301!10839-111E2;0.93638!10692-109F8;0.101455!10079-102A7;0.518896!10078-102A6;0.955705!10721-110A1;0.988108!10569-108B2;0.987223!10570-108B3;0.86774!10571-108B4;0.650533!10647-109A8;0.396692!10752-110D5;0.6941!10782-110G8;0.574845!10726-110A6;0.584534!10018-101C9;0.373182!10086-102B5;0.953962!10182-103D2;0.422508!10165-103B3;0.954008!10499-107C4;0.919526!10408-106B3;0.43235!10019-101D1;0.952545!10068-101I5;0.664719!10075-102A3;0.812771!10077-102A5;0.884682!10727-110A7;0.200721!10775-110G1;0.908991!10412-106B7;0.589065!12231-129F8;0.735072!12232-129F9;0.0764923!12233-129G1;0.12426!12234-129G2;0.0637293!10414-106B9;0.0617345!10170-103B8;0.853813!10183-103D3;0.830577!10150-102I6;0.767797!10174-103C3;0.893905!10155-103A2;0.658208!10038-101F2;0.844711!10838-111E1;0.769219!10759-110E3;0.686494!10514-107E1;0.381288!10465-106H6;0.572869!10691-109F7;0.501163!10843-111E6;0.25287!10844-111E7;0.644662!11747-123G1;0.880627!11748-123G2;0.985437!11749-123G3;0.787781!11750-123G4;0.625567!11751-123G5;0.79343!11840-124H4;0.833809!11752-123G6;0.787329!11753-123G7;0.929702!11754-123G8;0.669994!11755-123G9;0.820717!11756-123H1;0.653407!11833-124G6;0.513631!11760-123H5;0.362535!11836-124G9;0.40659!11758-123H3;0.791153!11835-124G8;0.919887!11762-123H7;0.593568!11838-124H2;0.751039!11757-123H2;0.441615!11759-123H4;0.284194!11761-123H6;0.749489!11842-124H6;0.525771!11837-124H1;0.330117!10568-108B1;0.732991!13230-141I8;0.896901!13231-141I9;0.754753!10696-109G3;0.850511!10493-107B7;0.992861!10494-107B8;0.546522!10850-111F4;0.259716!10851-111F5;0.297466!10852-111F6;0.924452!10853-111F7;0.690047!10854-111F8;0.024919!10855-111F9;0.505047!10856-111G1;0.723902!10847-111F1;0.506376!10846-111E9;0.67518!10848-111F2;0.436207!10845-111E8;0.854453!10857-111G2;0.687321!10858-111G3;0.716116!10156-103A3;0.65208!11901-125F2;0.919506!11902-125F3;0.433264!11903-125F4;0.669279!10689-109F5;0.492766!10648-109A9;0.063943!10784-110H1;0.804467!10744-110C6;0.802323!10772-110F7;0.820967!10474-106I6;0.68277!10600-108E6;0.71284!10684-109E9;0.662227!12226-129F3;0.698894!12227-129F4;0.768152!10508-107D4;0.474929!10539-107G8;0.493365!10607-108F4;0.920158!10555-107I6;0.910072!10774-110F9;0.746835!10637-108I7;0.669141!10663-109C6;0.442119!10728-110A8;0.654292!10729-110A9;0.524605!10430-106D7;0.812029!10730-110B1;0.978925!10813-111B3;0.701267!10812-111B2;0.742535!10037-101F1;0.73289!10172-103C1;0.867423!10163-103B1;0.758352!10076-102A4;0.936031!10073-102A1;0.635607!10036-101E9;0.84244!10195-103E6;0.7579!10277-104E7;0.831737!10434-106E2;0.709133!10550-107I1;0.562473!10545-107H5;0.731402!10544-107H4;0.434975!10704-109H2;0.965078!10510-107D6;0.708904!10558-107I9;0.0201944!10020-101D2;0.878931!10732-110B3;0.643873!10049-101G4;0.52598!10698-109G5;0.48683!10437-106E5;0.447693!10417-106C3;0.592579!10035-101E8;0.689112!10171-103B9;0.875584!10157-103A4;0.793901!10034-101E7;0.8987!10072-101I9;0.893886!10199-103F1;0.854819!10200-103F2;0.789085!10697-109G4;0.665228!10723-110A3;0.382669!10179-103C8;0.81555!10160-103A7;0.938294!10180-103C9;0.72232!10162-103A9;0.899759!10021-101D3;0.96206!10840-111E3;0.872976!10706-109H4;0.672592!10033-101E6;0.436884!10032-101E5;0.978939!10490-107B4;0.867676!10439-106E7;0.964822!10022-101D4;0.950324!10176-103C5;0.683469!10469-106I1;0.94769!10067-101I4;0.913614!10411-106B6;0.265952!10471-106I3;0.663355!10030-101E3;0.165558!10475-106I7;0.83303!10787-110H4;0.698329!10477-106I9;0.45026!10695-109G2;0.735961!11771-123I7;0.679616!11772-123I8;0.28799!11773-123I9;0.207859!10093-102C3;0.953841!10442-106F1;0.770068!10442-106F1;0.55602!10201-103F3;0.456389!10639-108I9;0.601518!11843-124H7;0.685642!11841-124H5;0.422162!10693-109F9;0.58943!10436-106E4;0.6784!10483-107A6;0.783479!10282-104F3;0.733652!10023-101D5;0.854013!10066-101I3;0.859074!10065-101I2;0.48877!10800-110I8;0.664408!10610-108F7;0.739398!10841-111E4;0.664539!10541-107H1;0.735518!10842-111E5;0.743461!10562-108A4;0.631529!10024-101D6;0.853946!10064-101I1;0.661363!10609-108F6;0.454981!10048-101G3;0.649259!10781-110G7;0.373651!10181-103D1;0.895436!10159-103A6;0.966777!10056-101H2;0.86301!10737-110B8;0.924506!10025-101D7;0.940643!10044-101F8;0.957478!10424-106D1;0.810291!10463-106H4;0.623329!10616-108G4;0.818149!10486-107A9;0.540891!10062-101H8;0.415046!10202-103F4;0.255481!10158-103A5;0.887282!10441-106E9;0.956854!10031-101E4;0.230907!10063-101H9;0.842176!10063-101H9;0.761746!11763-123H8;0.719924!11765-123I1;0.633002!11768-123I4;0.553959!10807-111A6;0.74182!10790-110H7;0.478382!10798-110I6;0.655122!10786-110H3;0.65315!10591-108D6;0.855434!10593-108D8;0.914992!10590-108D5;0.922498!10026-101D8;0.905373!10096-102C6;0.678957!10168-103B6;0.465039!10154-103A1;0.995418!10209-103G2;0.989684!10061-101H7;0.936879!10027-101D9;0.66924!10043-101F7;0.893079!10783-110G9;0.972854!10028-101E1;0.130687!10060-101H6;0.928878!10203-103F5;0.669538!10059-101H5;0.925364!10047-101G2;0.794568!10029-101E2;0.681955!10058-101H4;0.807995!10418-106C4;0.887151!10492-107B6;0.738686!10694-109G1;0.825492!10797-110I5;0.850132!10057-101H3;0.335044!10100-102D1;0.991802!10055-101H1;0.942244!10204-103F6;0.714771!10191-103E2;0.525038!10563-108A5;0.597351
|name=CNhs12036_bu_f2
|name=CNhs12036_bu_f2
|tomtom_result=DOT6#MA0351.1;8;0.0118482;5.63976;1;7;CTGAGGT;AGGATGCGATGAGGTGCAGAA;-!TOD6#MA0350.1;8;0.0171986;8.18651;1;7;CTGAGGT;AAAACGCGATGAGCTGTGCCT;-!Mafb#MA0117.1;1;0.0186413;8.87324;1;7;CTGAGGT;GCTGACGG;+!MIG1#MA0337.1;0;0.0194773;9.27119;1;7;CTGAGGT;GCGGGGG;-!MET28#MA0332.1;0;0.01954;9.30103;1;6;CTGAGGT;CTGTGG;+
}}
}}

Latest revision as of 13:58, 7 September 2012

Full Name: CNhs12036_bu_f2

Motif matrix
POACGT
10.7829136947267932168.20964369058788135.707420447931380.7829136947267932
20.00.00.0305.4828915279728
30.00.0305.48289152797280.0
4305.48289152797280.00.00.0
50.00.0305.48289152797280.0
65.1594480007965915117.8939292179551177.27006630842445.1594480007965915
774.6528295227473351.75189414717165460.538844538113885118.53932331993988

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
DOT6#MA0351.180.01184825.6397617CTGAGGTAGGATGCGATGAGGTGCAGAA-
TOD6#MA0350.180.01719868.1865117CTGAGGTAAAACGCGATGAGCTGTGCCT-
Mafb#MA0117.110.01864138.8732417CTGAGGTGCTGACGG+
MIG1#MA0337.100.01947739.2711917CTGAGGTGCGGGGG-
MET28#MA0332.100.019549.3010316CTGAGGTCTGTGG+
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