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MacroAPE 1083:Motif GTTNAC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;800;0!02;0;0;0;800!03;0;0;0;800!04;200;200;200;200!05;800;0;0;0!06;0;800;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.512988!11327-...")
 
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89-110H6;0.937189!10828-111C9;0.544125!10788-110H5;0.712598!10792-110H9;0.993298!10765-110E9;0.601258!10829-111D1;0.717516!10830-111D2;0.656409!10831-111D3;0.44143!10832-111D4;0.629156!10833-111D5;0.748743!10764-110E8;0.944782!10770-110F5;0.982111!10399-106A3;0.62638!10400-106A4;0.48484!10405-106A9;0.463427!10834-111D6;0.639257!10835-111D7;0.634443!10836-111D8;0.710815!10837-111D9;0.829073!10699-109G6;0.280657!10802-111A1;0.428024!10796-110I4;0.727896!10010-101C1;0.627534!10810-111A9;0.459599!10421-106C7;0.173072!10708-109H6;0.462003!12235-129G3;0.706631!12236-129G4;0.050987!12237-129G5;0.0352072!10167-103B5;0.111824!10151-102I7;0.212078!10428-106D5;0.323233!10795-110I3;0.469389!10805-111A4;0.598032!10052-101G7;0.541502!10189-103D9;0.396186!10589-108D4;0.216751!10425-106D2;0.738034!10427-106D4;0.477197!10702-109G9;0.325429!10432-106D9;0.664211!10496-107C1;0.311746!10718-109I7;0.227063!10011-101C2;0.977721!10053-101G8;0.358063!10686-109F2;0.0751921!10084-102B3;0.720526!10012-101C3;0.335621!10085-102B4;0.240147!10482-107A5;0.313672!10419-106C5;0.957872!10080-102A8;0.426111!10760-110E4;0.114487!10709-109H7;0.185193!10710-109H8;0.607576!10703-109H1;0.49941!10719-109I8;0.117448!10642-109A3;0.411685!10177-103C6;0.197113!10164-103B2;0.293214!10173-103C2;0.269628!10166-103B4;0.459647!10083-102B2;0.574308!10188-103D8;0.387118!10552-107I3;0.254569!10553-107I4;0.884566!10013-101C4;0.718707!10536-107G5;0.229038!10618-108G6;0.819618!10423-106C9;0.404317!10785-110H2;0.819035!12238-129G6;0.959093!12239-129G7;0.0367594!12240-129G8;0.0931952!10416-106C2;0.0742906!10801-110I9;0.878412!10766-110F1;0.692755!10824-111C5;0.928799!10825-111C6;0.767323!10826-111C7;0.717968!10454-106G4;0.824943!10409-106B4;0.765675!10638-108I8;0.896436!10636-108I6;0.420842!10513-107D9;0.872841!10420-106C6;0.515387!10082-102B1;0.918055!10014-101C5;0.0992986!10070-101I7;0.177299!10452-106G2;0.125225!10453-106G3;0.509852!10449-106F8;0.306944!10042-101F6;0.259066!10069-101I6;0.536306!10193-103E4;0.794319!10631-108I1;0.244228!10438-106E6;0.582781!10488-107B2;0.920958!10196-103E7;0.460314!10071-101I8;0.0249779!10071-101I8;0.467923!10041-101F5;0.416465!10451-106G1;0.748408!10450-106F9;0.214747!10604-108F1;0.397286!10605-108F2;0.779126!10606-108F3;0.770842!10603-108E9;0.610316!10497-107C2;0.550554!10448-106F7;0.562858!10643-109A4;0.181422!10426-106D3;0.379768!10431-106D8;0.989784!10197-103E8;0.723751!10443-106F2;0.483805!10815-111B5;0.607447!10816-111B6;0.652384!10817-111B7;0.76449!10015-101C6;0.671152!10410-106B5;0.506177!10054-101G9;0.953822!10758-110E2;0.845936!10711-109H9;0.515791!10040-101F4;0.423363!10470-106I2;0.250702!10415-106C1;0.721456!10198-103E9;0.753206!10614-108G2;0.324629!10612-108F9;0.272489!10549-107H9;0.288602!10615-108G3;0.379521!10487-107B1;0.441686!10433-106E1;0.274434!10688-109F4;0.685124!10444-106F3;0.835837!10444-106F3;0.443625!10485-107A8;0.619237!10413-106B8;0.74071!10175-103C4;0.849747!10161-103A8;0.250323!12131-128D7;0.416154!10624-108H3;0.282349!10712-109I1;0.596775!10205-103F7;0.542427!10206-103F8;0.799973!10207-103F9;0.851778!10050-101G5;0.745429!10051-101G6;0.837938!10016-101C7;0.857211!10046-101G1;0.70698!10778-110G4;0.695076!10633-108I3;0.372873!10818-111B8;0.905635!10819-111B9;0.538976!10820-111C1;0.521187!10484-107A7;0.544487!10808-111A7;0.369529!10169-103B7;0.296759!10153-102I9;0.250231!13425-144D5;0.386371!13433-144E4;0.317272!13437-144E8;0.365547!11904-125F5;0.343457!11905-125F6;0.919488!10039-101F3;0.741854!10791-110H8;0.249896!10017-101C8;0.815274!10045-101F9;0.481148!10509-107D5;0.386439!10839-111E2;0.805744!10692-109F8;0.183628!10079-102A7;0.99548!10078-102A6;0.847408!10721-110A1;0.669767!10569-108B2;0.934116!10570-108B3;0.890411!10571-108B4;0.894188!10647-109A8;0.637124!10752-110D5;0.961596!10782-110G8;0.93195!10726-110A6;0.526404!10018-101C9;0.734778!10086-102B5;0.0994528!10182-103D2;0.20155!10165-103B3;0.297938!10499-107C4;0.328562!10408-106B3;0.303058!10019-101D1;0.820735!10068-101I5;0.271109!10075-102A3;0.267646!10077-102A5;0.175269!10727-110A7;0.158281!10775-110G1;0.639132!10412-106B7;0.372429!12231-129F8;0.701369!12232-129F9;0.207261!12233-129G1;0.498034!12234-129G2;0.319014!10414-106B9;0.394126!10170-103B8;0.584677!10183-103D3;0.173389!10150-102I6;0.22117!10174-103C3;0.286047!10155-103A2;0.524167!10038-101F2;0.514257!10838-111E1;0.444748!10759-110E3;0.288133!10514-107E1;0.239692!10465-106H6;0.0435021!10691-109F7;0.779063!10843-111E6;0.951881!10844-111E7;0.258603!11747-123G1;0.44272!11748-123G2;0.70644!11749-123G3;0.371042!11750-123G4;0.787428!11751-123G5;0.334965!11840-124H4;0.620253!11752-123G6;0.701942!11753-123G7;0.622849!11754-123G8;0.981796!11755-123G9;0.921153!11756-123H1;0.23557!11833-124G6;0.96299!11760-123H5;0.473711!11836-124G9;0.950987!11758-123H3;0.547657!11835-124G8;0.787391!11762-123H7;0.553169!11838-124H2;0.543346!11757-123H2;0.918278!11759-123H4;0.533985!11761-123H6;0.569109!11842-124H6;0.829307!11837-124H1;0.625054!10568-108B1;0.65025!13230-141I8;0.373326!13231-141I9;0.549781!10696-109G3;0.609128!10493-107B7;0.764044!10494-107B8;0.421975!10850-111F4;0.739093!10851-111F5;0.197625!10852-111F6;0.619437!10853-111F7;0.83291!10854-111F8;0.905546!10855-111F9;0.736924!10856-111G1;0.33666!10847-111F1;0.929523!10846-111E9;0.0551891!10848-111F2;0.584987!10845-111E8;0.889235!10857-111G2;0.0820422!10858-111G3;0.54802!10156-103A3;0.518885!11901-125F2;0.281304!11902-125F3;0.799405!11903-125F4;0.467165!10689-109F5;0.621188!10648-109A9;0.661719!10784-110H1;0.635998!10744-110C6;0.577508!10772-110F7;0.981173!10474-106I6;0.710475!10600-108E6;0.62384!10684-109E9;0.751833!12226-129F3;0.657579!12227-129F4;0.538991!10508-107D4;0.910843!10539-107G8;0.147313!10607-108F4;0.0740008!10555-107I6;0.47432!10774-110F9;0.313619!10637-108I7;0.763464!10663-109C6;0.965208!10728-110A8;0.794501!10729-110A9;0.672104!10430-106D7;0.763075!10730-110B1;0.679858!10813-111B3;0.100898!10812-111B2;0.625783!10037-101F1;0.938885!10172-103C1;0.26304!10163-103B1;0.182312!10076-102A4;0.298747!10073-102A1;0.224549!10036-101E9;0.295249!10195-103E6;0.236743!10277-104E7;0.272358!10434-106E2;0.661442!10550-107I1;0.61773!10545-107H5;0.529047!10544-107H4;0.925413!10704-109H2;0.897583!10510-107D6;0.412763!10558-107I9;0.88109!10020-101D2;0.934778!10732-110B3;0.309436!10049-101G4;0.732378!10698-109G5;0.144266!10437-106E5;0.824227!10417-106C3;0.624421!10035-101E8;0.984535!10171-103B9;0.225273!10157-103A4;0.265219!10034-101E7;0.242873!10072-101I9;0.248501!10199-103F1;0.286692!10200-103F2;0.476536!10697-109G4;0.852157!10723-110A3;0.878768!10179-103C8;0.533574!10160-103A7;0.44883!10180-103C9;0.539058!10162-103A9;0.519718!10021-101D3;0.575112!10840-111E3;0.107443!10706-109H4;0.50732!10033-101E6;0.624501!10032-101E5;0.309753!10490-107B4;0.238391!10439-106E7;0.401805!10022-101D4;0.502667!10176-103C5;0.245192!10469-106I1;0.186839!10067-101I4;0.863952!10411-106B6;0.913248!10471-106I3;0.0666511!10030-101E3;0.939856!10475-106I7;0.713975!10787-110H4;0.818749!10477-106I9;0.374006!10695-109G2;0.115638!11771-123I7;0.288184!11772-123I8;0.626382!11773-123I9;0.451554!10093-102C3;0.177535!10442-106F1;0.398556!10442-106F1;0.740166!10201-103F3;0.85317!10639-108I9;0.0941921!11843-124H7;0.6!11841-124H5;0.537833!10693-109F9;0.317178!10436-106E4;0.737085!10483-107A6;0.227343!10282-104F3;0.296743!10023-101D5;0.766072!10066-101I3;0.619654!10065-101I2;0.79052!10800-110I8;0.967077!10610-108F7;0.459901!10841-111E4;0.432912!10541-107H1;0.356862!10842-111E5;0.60028!10562-108A4;0.422625!10024-101D6;0.291068!10064-101I1;0.321163!10609-108F6;0.516212!10048-101G3;0.715488!10781-110G7;0.447242!10181-103D1;0.324908!10159-103A6;0.408307!10056-101H2;0.641428!10737-110B8;0.426181!10025-101D7;0.886478!10044-101F8;0.220473!10424-106D1;0.195512!10463-106H4;0.508909!10616-108G4;0.870811!10486-107A9;0.865774!10062-101H8;0.24784!10202-103F4;0.0471715!10158-103A5;0.531082!10441-106E9;0.661574!10031-101E4;0.690219!10063-101H9;0.249919!10063-101H9;0.336942!11763-123H8;0.560762!11765-123I1;0.467809!11768-123I4;0.298571!10807-111A6;0.492019!10790-110H7;0.142678!10798-110I6;0.080663!10786-110H3;0.154925!10591-108D6;0.226763!10593-108D8;0.116152!10590-108D5;0.515038!10026-101D8;0.511171!10096-102C6;0.296475!10168-103B6;0.855573!10154-103A1;0.381532!10209-103G2;0.413374!10061-101H7;0.660229!10027-101D9;0.740013!10043-101F7;0.225556!10783-110G9;0.130783!10028-101E1;0.720719!10060-101H6;0.141753!10203-103F5;0.392891!10059-101H5;0.965639!10047-101G2;0.943218!10029-101E2;0.402514!10058-101H4;0.365613!10418-106C4;0.567912!10492-107B6;0.802858!10694-109G1;0.771681!10797-110I5;0.395805!10057-101H3;0.482196!10100-102D1;0.729739!10055-101H1;0.182244!10204-103F6;0.533807!10191-103E2;0.412118!10563-108A5;0.366505
|name=motif_GTTNAC
|name=motif_GTTNAC
|tomtom_result=FKH2#MA0297.1;1;0.000913345;0.434752;0.496316;6;GTTAAC;TGTTTAC;-!FOXD1#MA0031.1;2;0.00104432;0.497097;0.496316;6;GTTAAC;ATGTTTAC;-!FOXO3#MA0157.1;1;0.00195084;0.928598;0.578632;6;GTTAAC;TGTTTACA;-!Foxa2#MA0047.2;1;0.00243505;1.15908;0.578632;6;GTTAAC;TGTTTACTTAGG;+!FOXF2#MA0030.1;3;0.00523818;2.49337;0.634006;6;GTTAAC;ATTGTTTACGTTTG;-!FKH1#MA0296.1;8;0.00590013;2.80846;0.634006;6;GTTAAC;TCCTCTTTGTTTACAATTCA;-!FOXA1#MA0148.1;1;0.00602741;2.86905;0.634006;6;GTTAAC;TGTTTACTTTG;+!br_Z4#MA0013.1;3;0.00630181;2.99966;0.634006;6;GTTAAC;TTTGTTTACTA;-!slp1#MA0458.1;2;0.00630181;2.99966;0.634006;6;GTTAAC;TTGTTTACATT;+!SRY#MA0084.1;3;0.0066702;3.17501;0.634006;6;GTTAAC;ATTGTTTAC;-!NR1H2::RXRA#MA0115.1;0;0.0090784;4.32132;0.78446;6;GTTAAC;GTTGACCTTTGACCTTT;-!HCM1#MA0317.1;2;0.0105414;5.01771;0.834971;6;GTTAAC;TTGTTTAT;-!CG11617#MA0173.1;-1;0.0120654;5.74313;0.882171;5;GTTAAC;TTAACAT;+!ct#MA0218.1;0;0.0136888;6.51589;0.929379;6;GTTAAC;GTTCAA;-!tll#MA0459.1;0;0.0173473;8.25731;0.99843;6;GTTAAC;TTTGACTTTT;-!fkh#MA0446.1;1;0.0207327;9.86874;0.99843;6;GTTAAC;TGTTTGCTTAA;+
}}
}}

Latest revision as of 14:00, 7 September 2012

Full Name: motif_GTTNAC

Motif matrix
POACGT
01008000
02000800
03000800
04200200200200
05800000
06080000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
FKH2#MA0297.110.0009133450.4347520.4963166GTTAACTGTTTAC-
FOXD1#MA0031.120.001044320.4970970.4963166GTTAACATGTTTAC-
FOXO3#MA0157.110.001950840.9285980.5786326GTTAACTGTTTACA-
Foxa2#MA0047.210.002435051.159080.5786326GTTAACTGTTTACTTAGG+
FOXF2#MA0030.130.005238182.493370.6340066GTTAACATTGTTTACGTTTG-
FKH1#MA0296.180.005900132.808460.6340066GTTAACTCCTCTTTGTTTACAATTCA-
FOXA1#MA0148.110.006027412.869050.6340066GTTAACTGTTTACTTTG+
br_Z4#MA0013.130.006301812.999660.6340066GTTAACTTTGTTTACTA-
slp1#MA0458.120.006301812.999660.6340066GTTAACTTGTTTACATT+
SRY#MA0084.130.00667023.175010.6340066GTTAACATTGTTTAC-
NR1H2::RXRA#MA0115.100.00907844.321320.784466GTTAACGTTGACCTTTGACCTTT-
HCM1#MA0317.120.01054145.017710.8349716GTTAACTTGTTTAT-
CG11617#MA0173.1-10.01206545.743130.8821715GTTAACTTAACAT+
ct#MA0218.100.01368886.515890.9293796GTTAACGTTCAA-
tll#MA0459.100.01734738.257310.998436GTTAACTTTGACTTTT-
fkh#MA0446.110.02073279.868740.998436GTTAACTGTTTGCTTAA+
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